These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9733#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 997 fasta sequence [GGGAAAAAAGCAATAGATAGTGCTATGTATGTAGCAATGAAGGGGGTAGTAGCGGATGGACATCAGTTTATAAATGCTGCAATAGAGAAAGGAGCTAACGTTATTGTTTGTGAAGAAATTCCGTCCGATAAGAAAGAAAATGTAACCTATATTCAGGTTAAAGATACAGCTGTACGATTTGCTGGTGTCCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGTACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAA---CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC-AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC-GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG-CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC-GGTCGCCAAC-TTT-GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA-GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAAGCCAGTTTTGATAGAAATGTATCAATGATGATGTAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCGCGAG] [-] EMBL CNS09MR1 [GGGAAAAAAGCAATAGATAGTGCTATGTATGTAGCAATGAAGGGGGTAGTATTGGATGAACATCAGTTTATAAATGCTGCAATAGAGAAAGGAGCTAACGTTATTGTTTGTGAAGAAATTCCGTCCGATAAGAAAGAAAATGTAACCTATATTCAGGTTAAAGAAACAGCTGTACGATTTGCTGTTGTCCAAAGAGTGCTGAAACCACGTGGGTTGGAACAGAACTCGTACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCAGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTCGGGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGAACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGCGGGTCGCCAACTTTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGTATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGAGGCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAAGCCAGTTTTGATAGAAAT ] [+] EMBL CNS096H3 [ aAAAAAATAGTGCTATGTATGTAGCAATGAAGGGGGTAGTAGCGGATGGACATCAGTTTATAAATGCTGCAATAGAGAAAGGAGCTAACGTTATTGTTTGTGAAGAAATTCCGTCCGATAAGAAAGAAAATGTAACCTATATTCAGGTTAAAGATACAGCTGTACGATTTGCTGGTGTCCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGTACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCAGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACG AAAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGTTCCTGCTGCTGG TTTCGCCTCTA ] [+] EMBL CNS09MR0 [ GTGCTATGTATGTAGCAATGAAGGGGGTAGTAGCGGATGGACATCAGTTTATAAATGCTGCAATAGAGAAAGGAGCTAACGTTATTGTTTGTGAAGAAATTCCGTCCGATAAGAAAGAAAATGTAACCTATATTCAGGTTAAAGATACAGCTGTACGATTTGCTGGTGTCCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGTACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCAGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAAGCCAGTTTTGATAGAAATGTATCAATGATGATGTAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCGCGAG] [+] EMBL CNS09KVV [ GCAATGAAGGGGGTAGTAGCGGATGGACATCAGTTTATAAATGCTGCAATAAAGAAAGGAGCTAACGTTATTGTATGTAAAGAAATT ] [+] EMBL CNS091S9 [ cctaCTGGACGATTTGCTGGTGTCCAAAGAGTGCTGCAACC CGTGGGTTGGAACAGGACTCGTACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCAGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGCANATGA GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTG ] [+] EMBL AL933521 [ ccgaggttaTGT CAAAGAGTGCTGCA CACCTTGGTTGGAACAGGACTCGAACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAA CCTGCTGCCGTGGTCGTGGTGGTGTA AGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTCGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCG CAAC TTT GCCGGCGG CCTGTGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGATCACCGATGCGAGCCGAA CA CATTCCTGTCA ] [+] EMBL BM633282 [ ccgGTGCTGCAACCACGTGGGTTGGAACAGGACTCGAACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAA CCTGCTGCCGTGGTCGTGGTGGTGTATAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGATCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCTCACAACACAATCAATTCGAGCAAT ] [+] EMBL BX625689 [ GCTGCAACCACGTGGGTTGGAACAGGACTCGAACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAACCTCCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGATATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCT ] [+] EMBL BX621188 [ ctTGNGTTGGAACAGGACTCGAACGATTTTCCCTGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCGCCCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCNTTGCACGA ] [+] EMBL BM624530 [ CCGGCACAAGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAACCTCCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGATATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAAGCCAGTT ] [+] EMBL CNS08UMY [ GGGGTGTTTGGCGCTTTGAAAAATCTCGGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGCAAACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGa ] [+] EMBL BM582229 [ ccGCGCTTTGAAAAATCTCGGAA CCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGATCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCTCACAACACAATCA ] [-] EMBL CNS091SA [ CTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGCCGCCTTCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGCAAATGA GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAAGCCAGTTTTGATAGAAATGTATCAATGATNA GTAAAAAAAAAAAAAAAAAAAggc ] [+] EMBL BX611119 [ TCTGTCCTGGTGC AACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTC GGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCG CCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGATATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAATCCAGTTTTGATAGAAATGTATCA ] [-] EMBL CNS096H4 [ CTATTAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGAATGTCACGCGGCTATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGC GGTCGCCAAC TTTCGCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGAATTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCG ] [-] EMBL CNS09KVW [ CGAATGGCCATGGC GGTCGCCAAC TTT GCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGTATTTACGTGCAATACACGACCACAGTGTGTAACGGGATGCAA ] [-] EMBL CNS08UMZ [ TTCACGTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGA GCCTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTTTCTTCTGTCTATTGTTGAACGTAGAGTTTAAAATAAATTAAAGCCAGTTTTGA ] consensusID : consensus_9733#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 974 fasta sequence [CNAGGCAAGAATTCGCCCCGAGTGTTTTCACGCTGGGTTGGAACAGGACTCGAACGATTTTCCCTGTCACAAGGATCTCGCCGTATTGGCGCGTGTTATGGCGCCTATATGAAAACACTCTTCGNGGAGACACTCCTGTCTGCCTGATGTGCTCTGCTAGTGATGCGACTGTAGCAAGCTGCAAGTGGTTGCCGGCACGTATCCTAGTCCCCTTGGGGTTGTCCAACTTGGATACCTGCAGGCTAGGGCCCGTTCCAAAACAAGGACNAGAAGCCAACGTTAACATGCNTTGGCCANCTGCTTCTTAACCTGGCCATCGGAAGTGGGTTTTAACCGCCTGGAAGAATGAGGCGCTGNGTTTACCTGCATTTGGCGATGANCTGGTTTACATGGAGGGCACCGAAATTTCAGGAGCCTAGGCTTTATTGGGACCCTGGAATGTTCCACCNTTTGGTGCCTTTGGCCCTTATGGTNGGACATTTTTCNCGNGTTTCCCTGGGGNACACGCCGTTTACCCGGTTAATGACCACTAAGGCTTTGCCCGGAAGTGCCCTAAGCAAANAACGATCNAACGTATTTTCCGACCCTAGGTGAGCAGCCCGACCAGTTTACCTAATAGGAGGTTAGATTAAACATGCCGCCCCTGGGTAATCAGGCATGGGGTACCATTTTTAATTCCCAGTGAGGNACAGCNCACAATGGGATGGCTCANACGGCGCTCACACGNTCTTGGGCAACACCAAACTGGGTGGGGGCGNAGAAANGCCCCTAACANGGGNATANACCACCCCTGGGGAAAAGACACNGAGTGAAACGTTTTGGCGTTTATAAAGCACCTTTTGGGGCGCANGACTTTATTCCGTGGGCGCAAGAAGTTATTACCCGTGTTTAACCCCACAAATTTTCTTTAGGGCGCACGCCGTAATCGAGCCTGCGGTTCAAACTTCTATAAAACACCTGACGGCTGGGGCACT] [+] EMBL AL930711 [CNAGGCAAGAATTCGCCCCGAGTGTTTTCACGCTGGGTTGGAACAGGACTCGAACGATTTTCCCTGTCACAAGGATCTCGCCGTATTGGCGCGTGTTATGGCGCCTATATGAAAACACTCTTCGNGGAGACACTCCTGTCTGCCTGATGTGCTCTGCTAGTGATGCGACTGTAGCAAGCTGCAAGTGGTTGCCGGCACGTATCCTAGTCCCCTTGGGGTTGTCCAACTTGGATACCTGCAGGCTAGGGCCCGTTCCAAAACAAGGACNAGAAGCCAACGTTAACATGCNTTGGCCANCTGCTTCTTAACCTGGCCATCGGAAGTGGGTTTTAACCGCCTGGAAGAATGAGGCGCTGNGTTTACCTGCATTTGGCGATGANCTGGTTTACATGGAGGGCACCGAAATTTCAGGAGCCTAGGCTTTATTGGGACCCTGGAATGTTCCACCNTTTGGTGCCTTTGGCCCTTATGGTNGGACATTTTTCNCGNGTTTCCCTGGGGNACACGCCGTTTACCCGGTTAATGACCACTAAGGCTTTGCCCGGAAGTGCCCTAAGCAAANAACGATCNAACGTATTTTCCGACCCTAGGTGAGCAGCCCGACCAGTTTACCTAATAGGAGGTTAGATTAAACATGCCGCCCCTGGGTAATCAGGCATGGGGTACCATTTTTAATTCCCAGTGAGGNACAGCNCACAATGGGATGGCTCANACGGCGCTCACACGNTCTTGGGCAACACCAAACTGGGTGGGGGCGNAGAAANGCCCCTAACANGGGNATANACCACCCCTGGGGAAAAGACACNGAGTGAAACGTTTTGGCGTTTATAAAGCACCTTTTGGGGCGCANGACTTTATTCCGTGGGCGCAAGAAGTTATTACCCGTGTTTAACCCCACAAATTTTCTTTAGGGCGCACGCCGTAATCGAGCCTGCGGTTCAAACTTCTATAAAACACCTGACGGCTGGGGCACT] consensusID : consensus_9733#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence [CGCCAGAGGTTTNGTCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGAACGATTTTCCCTGGCACAAGGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAACTGCTGCCGTGGTCGTGGTGGTGTAAGCGCAAGGGTGCCGCTTCTGTCCTGGTGCAACCGAACGAGGCAGCCCTCAAACAGCAACATAATGCAGTTAACGCAGGAGTTTACCGAAAGCCGTCGTCGGGCGTCGGCCATCGCCGTTTGACGGATCCTGCTGCCTGGGTTTTTTCGCCCGTCTTACCAAATCCGGACCACAAAACGAATCCCCGGGCCCTCCAAGGTTTTACCCGAAGGGCTTACGAAAAACAAGGGAGNATGCACACGCGAAACCAGGGCCCTGACCGGATGTACTGGATTTGAGTTCTCCATTTGCCACCGATACCGGCTCACACCGGATGCTAAAGGAAGGCCAAAGGCATGAGCTAGGCAGGAACTCCAAAAACGAAACGCGTTAAGACTTCGCGGACCTGTCACGCCGGCTATTCCAGTGCCGCCCAAGGGCACAGGCCGAAAAACGAACCCGGGACATTGTGCCGCNATTGGGCCGGGGTCCTGGCCGAAACTTTTTTGGCCCCCTGTGGCTGTGGCCCCCTNGTGGTGCCCGGAAAACCGAAAAGGGGTATCCNGAACAAGGGCAAAT] [+] EMBL AL696938 [CGCCAGAGGTTTNGTCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGAACGATTTTCCCTGGCACAAGGGATCTCGCCGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAACTGCTGCCGTGGTCGTGGTGGTGTAAGCGCAAGGGTGCCGCTTCTGTCCTGGTGCAACCGAACGAGGCAGCCCTCAAACAGCAACATAATGCAGTTAACGCAGGAGTTTACCGAAAGCCGTCGTCGGGCGTCGGCCATCGCCGTTTGACGGATCCTGCTGCCTGGGTTTTTTCGCCCGTCTTACCAAATCCGGACCACAAAACGAATCCCCGGGCCCTCCAAGGTTTTACCCGAAGGGCTTACGAAAAACAAGGGAGNATGCACACGCGAAACCAGGGCCCTGACCGGATGTACTGGATTTGAGTTCTCCATTTGCCACCGATACCGGCTCACACCGGATGCTAAAGGAAGGCCAAAGGCATGAGCTAGGCAGGAACTCCAAAAACGAAACGCGTTAAGACTTCGCGGACCTGTCACGCCGGCTATTCCAGTGCCGCCCAAGGGCACAGGCCGAAAAACGAACCCGGGACATTGTGCCGCNATTGGGCCGGGGTCCTGGCCGAAACTTTTTTGGCCCCCTGTGGCTGTGGCCCCCTNGTGGTGCCCGGAAAACCGAAAAGGGGTATCCNGAACAAGGGCAAAT] consensusID : consensus_9733#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [CGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAACCTCCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGGCGTGCCATTTTTGTGCCGCCTTCTGTCCTGGTGCAACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTCGGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCGCCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGATATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGCGGTCGCCAACTTTGCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACC] [+] EMBL BX617273 [CGTTTGGGGTGTTTGGCGCTTTGAAAAATCTCGGAACCTCCTGCTGCCGTGGTCGTGGTGGTGTAGAGCGCAAGGGTGGCGTGCCATTTTTGTGCCGCCTTCTGTCCTGGTGCAACGAACGAGCAGCCCTCAACAGCAACATAATGCAGTTACGCAGAGTTACCGAAGCGTCGTGGGCGTCGGCCATCGCGTTGACGATCCTGCTGCTGGTTTTCGCCTCTACAATCGACACAACATCCGCCCTCAGTTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGTACTGATTGATCTCATTGCACGATACGGTCACACGATGCTAAGAGCCAAAGATGAGCTAGAGAACTCCAAACGAACGGTAGACTTCGGACTGTCACGCGGATATTCAGGCGCCCAGGAAGCGAAACACCGAATGGCCATGGCGGTCGCCAACTTTGCCGGCGGCCCTGGGCGGAAACGAAGGTTCGAAGGAATCATGCTGTAAATTACTGACCACCGATGCGAGCCGAACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9733#0 GGGAAAAAAGCAATAGATAGTGCTATGTATGTAGCAATGAAGGGGGTAGTAGCGGATGGA 60 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 ------------------------------------------------------------ consensus_9733#1 ------------------------------------------------------------ consensus_9733#0 CATCAGTTTATAAATGCTGCAATAGAGAAAGGAGCTAACGTTATTGTTTGTGAAGAAATT 120 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 ------------------------------------------------------------ consensus_9733#1 ------------------------------------------------------------ consensus_9733#0 CCGTCCGATAAGAAAGAAAATGTAACCTATATTCAGGTTAAAGATACAGCTGTACGATTT 180 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 ------------------------------------------------------CGCCAG 6 consensus_9733#1 ------------------------------------------------------CNAGGC 6 consensus_9733#0 GCTGGTGTCCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGTACGATTTTCCC 240 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 AGGTTTNGTCAAAGAGTGCTGCAACCACGTGGGTTGGAACAGGACTCGAACGATTTTCCC 66 consensus_9733#1 AAGAATTCGCCCCGAGTGTTTTCACG--CTGGGTTGGAACAGGACTCGAACGATTTTCCC 64 consensus_9733#0 TG-CACAAGG-ATCTCGCCGTTTGGG---GTGTT-TGGCGCTT---TGAAAAATCTC--- 288 consensus_9733#3 ------------------CGTTTGGG---GTGTT-TGGCGCTT---TGAAAAATCTC--- 32 consensus_9733#2 TGGCACAAGGGATCTCGCCGTTTGGG---GTGTT-TGGCGCTT---TGAAAAATCTC--- 116 consensus_9733#1 TGTCACAAGG-ATCTCGCCGTATTGGCGCGTGTTATGGCGCCTATATGAAAACACTCTTC 123 *** * ** ***** ****** * ****** *** consensus_9733#0 -GGAACCT---GCTGCCGTGGTCGTGGTGGTGTAG----AGCGCAAGGGTG--------- 331 consensus_9733#3 -GGAACCTCCTGCTGCCGTGGTCGTGGTGGTGTAG----AGCGCAAGGGTGGCGTGCCAT 87 consensus_9733#2 -GGAACT----GCTGCCGTGGTCGTGGTGGTGTA-----AGCGCAAGGGTG--------- 157 consensus_9733#1 GNGGAGACACTCCTGTC-TGCCTGATGTGCTCTGCTAGTGATGCGACTGTAGCAAGCTGC 182 * * *** * ** * *** * * ** * ** consensus_9733#0 ---------CCGCCTTCTGTCCTGGTGCAAC-GAACGAG-CAGCCCTCAA---CAGCAAC 377 consensus_9733#3 TTTTG--TGCCGCCTTCTGTCCTGGTGCAAC-GAACGAG-CAGCCCTCAA---CAGCAAC 140 consensus_9733#2 ---------CCGC-TTCTGTCCTGGTGCAACCGAACGAGGCAGCCCTCAAA--CAGCAAC 205 consensus_9733#1 AAGTGGTTGCCGGCACGTATCCTAGTCCCCTTGGGGTTGTCCAACTTGGATACCTGCAGG 242 *** * **** ** * * * * * * * * *** consensus_9733#0 ATAATGCAGTTA-CGCAGAG--TTACCGAAG--CGTCGT----GGGCGTCGGCCATC-GC 427 consensus_9733#3 ATAATGCAGTTA-CGCAGAG--TTACCGAAG--CGTCGT----GGGCGTCGGCCATC-GC 190 consensus_9733#2 ATAATGCAGTTAACGCAGGAGTTTACCGAAAGCCGTCGTC---GGGCGTCGGCCATC-GC 261 consensus_9733#1 CTAGGGCCCGTTCCAAAACAA-GGACNAGAAGCCAACGTTAACATGCNTTGGCCANCTGC 301 ** ** * * * ** * * *** ** * ***** * ** consensus_9733#0 G--TTGACG-ATCCTGCTGCTGG----TTTTCGCCTCTACAATCGA--------CACAAC 472 consensus_9733#3 G--TTGACG-ATCCTGCTGCTGG----TTTTCGCCTCTACAATCGA--------CACAAC 235 consensus_9733#2 CGTTTGACGGATCCTGCTGCCTGGGTTTTTTCGCCCGTCTTACCAAATCCGGACCACAAA 321 consensus_9733#1 TTCTTAACCTGGCC-ATCGGAAGTGGGTTTTAACCGCCTGGAAGAATGAGGCGCTGNGTT 360 ** ** ** * * **** ** * * consensus_9733#0 -ATCCGCCCTCAG--TTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGT 529 consensus_9733#3 -ATCCGCCCTCAG--TTACCGAGGCTACAAACAGGAGATGAAGGAACAGCCCGACGATGT 292 consensus_9733#2 -ACGAATCCCCGGGCCCTCCAAGGTTTTACCCGAAGGGCTTACGAAAAACAAGGGAGNAT 380 consensus_9733#1 TACCTGCATTTGGCGATGANCTGGTT-TACATGGAGGGCACCGAAATTTCAGGAGCCTAG 419 * * ** * * * ** * * consensus_9733#0 ACTGAT-TGATCTCATTG-------CACGATACGGTCACAC-GATGCTAAGAGCCAAAGA 580 consensus_9733#3 ACTGAT-TGATCTCATTG-------CACGATACGGTCACAC-GATGCTAAGAGCCAAAGA 343 consensus_9733#2 GCACACGCGAAACCAGGG-------CCCTGACCGGATGTACTGGATTTGAGTTCTCCATT 433 consensus_9733#1 GCTTTATTGGGACCCTGGAATGTTCCACCNTTTGGTGCCTTTGGCCCTTATGGTNGGACA 479 * * * * * * ** * * * * consensus_9733#0 TGAGCTAGAGA---ACTCCAAACGAACGG----TAGACTTCGGACTGTCACGCG-GCTAT 632 consensus_9733#3 TGAGCTAGAGA---ACTCCAAACGAACGG----TAGACTTCGGACTGTCACGCG-GATAT 395 consensus_9733#2 TGCCACCGATACCGGCTCACACCGGATGC----TAAAGGAAGGCCAAAGGCATGAGCTAG 489 consensus_9733#1 TTTTTCNCGNGTTTCCCTGGGGNACACGCCGTTTACCCGGTTAATGACCACTAAGGCTTT 539 * * * * ** * * * consensus_9733#0 TC----AGGCGCCCAGGAAGCGAAACA-CCGAATGGCCATGGCGGTC-------GCCAAC 680 consensus_9733#3 TC----AGGCGCCCAGGAAGCGAAACA-CCGAATGGCCATGGCGGTC-------GCCAAC 443 consensus_9733#2 GC----AGGAACTCCAAAAACGAAACG-CGTTAAGACTTCGCGGACCTGTCAC-GCCGGC 543 consensus_9733#1 GCCCGGAAGTGCCCTAAGCAAANAACGATCNAACGTATTTTCCGACCCTAGGTGAGCAGC 599 * * * * * *** * * * * * * consensus_9733#0 TTTGCCGGCGGCCCT---GGGCGG--AAACGAAGGTT--CG---------AAGGAATCAT 724 consensus_9733#3 TTTGCCGGCGGCCCT---GGGCGG--AAACGAAGGTT--CG---------AAGGAATCAT 487 consensus_9733#2 TATTCCAGTGCCGCCCAAGGGCAC--AGGCCGAAAAA--CG---------AACCCGGGAC 590 consensus_9733#1 CCGACCAGTTTACCTAATAGGAGGTTAGATTAAACATGCCGCCCCTGGGTAATCAGGCAT 659 ** * * ** * * ** ** * consensus_9733#0 GCTGTAA-ATTACTGACCACCGATGCGAGCCGAACCACCATTCCTGTCATGTTATCATGA 783 consensus_9733#3 GCTGTAA-ATTACTGACCACCGATGCGAGCCGAACC------------------------ 522 consensus_9733#2 ATTGTGCCGCNATTGGGCCGGGGTCCTGGCCGAAACTTTTTTGGCCCCCTGTGGCTGTGG 650 consensus_9733#1 GGGGTACCATTTTTAATTCCCAGTGAGGNACAGCNCACAATGGGATGGCTCANACGGCGC 719 ** * * * * consensus_9733#0 ATTCAC-GTGCAATACACGACCACAGTGTGTAACGGGATGCAAAATCGACGAAAATGAGC 842 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 -CCCCC-TNGTGGTGCCCGGA-AAACCGAAAAGGGGTATCCNGAACAAGGGCAAAT---- 703 consensus_9733#1 TCACACGNTCTTGGGCAACACCAAACTGGGTGGGGGCGNAGAAANGCCCCTAACANGGGN 779 consensus_9733#0 CTCACAACACAATCAATTCGAGCAATACAACCGCTTTTTGTCTTCTGTCTATTGTTGAAC 902 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 ------------------------------------------------------------ consensus_9733#1 ATANACCACCCCTGGGGAAAAGACACNGAGTGAAACGTTTTGGCGTTTATAAAGCACCTT 839 consensus_9733#0 GTAGAGTTTAAAATAAATTAAAGCCAGTTTTGATAGAAATGTATCAATGATGATGTAAAA 962 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 ------------------------------------------------------------ consensus_9733#1 TTGGGGCGCANGACTTTATTCCGTGGGCGCAAGAAGTTATTACCCGTGTTTAACCCCACA 899 consensus_9733#0 AAAAAAAAAAAAAAAAAAGGCCACATGTGCGCGAG------------------------- 997 consensus_9733#3 ------------------------------------------------------------ consensus_9733#2 ------------------------------------------------------------ consensus_9733#1 AATTTTCTTTAGGGCGCACGCCGTAATCGAGCCTGCGGTTCAAACTTCTATAAAACACCT 959 consensus_9733#0 --------------- consensus_9733#3 --------------- consensus_9733#2 --------------- consensus_9733#1 GACGGCTGGGGCACT 974 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||