|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9737#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 949 fasta sequence
[CCGCCCACGCG-CCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC---ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTCTCAA-CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATATCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG-ACCGAAGCGTGCTGATGTT-AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC--GTCACAAACTAAAACTCAC-GCA-GG-ACCAAAGCGTACTGATGTGAAAGAA-CCCCCCCAAACCAAAACGTCACAA-GGATCGGCAGAAA-CTAAAACT-CACCCA-GGG-CCGAAGCGTGCTGATGT-GAAAGAGCCTCCCCAA-GGC-TCAGGG-CATCCTCA-GGTTAAAGGATCCCCTGAGATAAAAACGCAACAGGTAAAAGGTGAACCTGAAACTAAAGATACACAAGTCCAGCAGCAAACGAAGGGTTAGATAACACTGGGTGAAATAAAACGACTTGAACGACAGTATATTCAACCTATTTTAACAGTTACATAGAAGAGTATGGCGATCACAACTTTAGAGGACTTATCAATCGTGCACCTAGCAATGAAATGCTTTGCAATAAAATTGTAAG]
[+] EMBL BM578614 [CCGCCCACGCGTCCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTACCGG ACATGGACCCAAAAGTGCCCAAGTGAAACAGTCTCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATGTCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCT GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGT CCGAAGCGTG ]
[+] EMBL BM635718 [CCGCCCACGCG TCCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTC CAACCCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATATCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAAAAACGAAACCACACCCAGG GCCGAAGCGTGCTGATGTTAAAAGAGCCTCCCCAAACCAAAACGCCCCCAGG ]
[+] EMBL BM599955 [ aCCCACGCG TCCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTC CAACCCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATATCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAAAAACGAAACCACACCCAGG GCCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGG CCGAAGCATG ]
[+] EMBL BM602679 [ CCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAAC ]
[+] EMBL BM654369 [ CCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTACCGG ACATGGACCCAAAAGTGCCCAAGTGAAACAGTCTCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATGTCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCT GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGT CCGAAGCGTGCTGATGT GAAAGAGCCTCCCCAA GGC ]
[+] EMBL BM624967 [ CCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCAGGGG CCGAAGCGTGCTGATGT GA ]
[+] EMBL BM629504 [ CCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTACCGG ACATGGACCCAAAAGTGCCCAAGTGAAACAGTCTCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAA ]
[+] EMBL BM588709 [ CCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTACCGG ACATGGACCCAAAAGTGCCCAAGTGAAACAGTCTCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATGTCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGGCACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCT GGCACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGGTCCGAAGCGTGCTGATGT GAAAGAGCCTCCCCAA GGC TCA ]
[+] EMBL BM633079 [ CCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCATGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGG CCGAAGCGTGCTGATG ]
[+] EMBL BM616724 [ CCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT ]
[+] EMBL BM594027 [ CCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTCACAACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACTCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCTCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCTTGGACCCAAGCGAGCCGATGTCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGA ]
[+] EMBL BM657673 [ CCGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCACGGCAGGG ACCAAAGCGTACTGATGTGAAAGAACCCCCCCCAAACCAAAACGTCACAAGGGATCGGCAGAAACCTAAAACTCCCCCCAGGGG CCGAAGCGTGCTGATGTGGAAAGAGCCCCCCCAAGGGCTTCAGGGCCATCCTCAGGGTTAAAGGATCCCCct ]
[+] EMBL BM621787 [ acagGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTC CAACCCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATATCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAAAAACGAAACCACACCCAGG GCCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAA ]
[+] EMBL BM598559 [ c cggGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTCACAACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACTCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCTCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCTTGGACCCAAGCGAGCCGATGTCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCAGGGG CCGAAGCGTGCTGATGT GAAAGAG ]
[+] EMBL BM623084 [ ccgGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGAGTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAAGATTC ACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAACCCCCCCCAAACC ]
[+] EMBL BX622918 [ anCTTCCATCCCAACAACTGAAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCACCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAAAAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAAGGTCTCAA CCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGG CCGAAGCGTGCTGATGT GAAAGAGCCTCCCCAA GGC TCAGGG CATCCTCA GGTTAAAGGATCCCCTG ]
[+] EMBL BM589531 [ ccgCTAAACAGTCTGAGGGTC CAACCCATGGACCCAAAAGTGCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATATCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAAAAACGAAACCACACCCAGG GCCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGG CCGAAGCATGCTGATGT GAAAGAGCCTCCCCAA GGC TCAGGG CATCCTCA GGTTAAAGGATCCCCTGAGACAAAAACGCAACAGGTAAAAGGTGAACCACAAACTAAAGATACACAAGTCCAGCAGCAAACGAAGGGTTAGATAACACTGGGTTAAATAAAATGACTTGAACGACAGT ]
[+] EMBL BM631352 [ ccGGATCTTCAGAAACGAAACCACACCCAGG ACCGAAGCGTGCTGATGTT AAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATC GTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGG CCGAAGCGTGCTGATGT GAAAGAGCCTCCCCAA GGC TCAGGG AATCCTCA GGTTAAAGGATCCCCTGAGATAAAAACGCAACAGGTAAAAGGTGAACCTGAAACTAAAGATACACAAGTCCAGCAGCAAACGAAGGGTTAGATAACACTGGGTGAAATAAAACGACTTGAACGACAGTATATTCAACCTATTTTAACAGTTACATAGAAGAGTATGGCGATCACAACTTTAGAGGACTTATCAATCGTGCACCTAGCAATGAAATGCTTTGCAATAAAATTGTAAG]
[+] EMBL BM637519 [ ccgCCCACGCGTCCGGTCACAAACTAAAACTCAC GCA GG ACCAAAGCGTACTGATGTGAAAGAA CCCCCCCAAACCAAAACGTCACAA GGATCGGCAGAAA CTAAAACT CACCCA GGG CCGAAGCGTGCTGATGT GAAAGAGCCTCCCCAA GGC TCAGGG AATCCTCA GGTTAAAGGATCCCCTGAGATAAAAACGCAACAGGTAAAAGGTGAACCTGAAACTAAAGATACACAAGTCCAGCAGCAAACGAAGGGTTAGATAACACTGGGTGAAATAAAACGACTTGAACGACAGTATATTCAACCTATTTTAACAGTTACATAGAAGAGTATGGCGATCACAACTTTAGAGGACTTATCAATCGTGCACCTAGCAATGAAATGCTTTGCAATAAAATTGTAAG]
consensusID : consensus_9737#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 255 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGGACCGAAGCGTGCTGATGTTAAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATCGTCACAAACTAAAACTCACGCAGGACCAAAGCGTAC]
[+] EMBL BM645010 [CCGCCCACGCGTCCGCCCACGCGTCCGGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACACACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGATCTTCAGAAACGAAACCACACCCAGGACCGAAGCGTGCTGATGTTAAAGAGCCTCCCCAAACCAAAACGCCCCAAGGATCGTCACAAACTAAAACTCACGCAGGACCAAAGCGTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9737#0 CCGCCCACGCGCCGGGTTTTTTGAAGGATCTGGACTAGAAAACTGGCAACTATGAAGCGA 60
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 GTAATAGTATTGCTTTGCATAGCTTCAATAGCTAACGCAGGGCTTTTGGTAAAACGTCAA 120
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 GATTCACAACAACAACAACAACAAACCCAAGAAATTAGGGAACTTCCATCCCAACAACTG 180
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 AAGGAAGAAGCCCCGCCACAGCAAACACAAGGACAACAGCCTCAGCGACCGCACGGACCA 240
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 CCCGAGACAAATATCAAGGGGGGACAGGAAACGAAACAGCATAAGGATTCGAAACCTGAA 300
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 AAGTTGCAGCAATCTCAGCAAACTAAACAGTCTGAGGGTCTCAACCATGGACCCAAAAGT 360
consensus_9737#1 ----------------------------------------CCGCCCACGCGTCCGCCCAC 20
* *** * **
consensus_9737#0 GCCCAAGTGAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACA 420
consensus_9737#1 GCGTCCG-GAAACAGTCCCCACAGACTAAAACATCTCAAGGATCTTCAGAAACGAAAACA 79
** * ****************************************************
consensus_9737#0 CACCATGGACCCAAGCGAGCCGATATCAAGGAACCTTCTCAAACCAAAACACCTCAAGGA 480
consensus_9737#1 CACCATGGACCCAAGCGAGCCGATACCAAGGAACCTTCTCAAACCAAAACACCTCAAGGA 139
************************* **********************************
consensus_9737#0 TCTTCAGAAACGAAACCACACCCAGGACCGAAGCGTGCTGATGTTAAAGAGCCTCCCCAA 540
consensus_9737#1 TCTTCAGAAACGAAACCACACCCAGGACCGAAGCGTGCTGATGTTAAAGAGCCTCCCCAA 199
************************************************************
consensus_9737#0 ACCAAAACGCCCCAAGGATCGTCACAAACTAAAACTCACGCAGGACCAAAGCGTACTGAT 600
consensus_9737#1 ACCAAAACGCCCCAAGGATCGTCACAAACTAAAACTCACGCAGGACCAAAGCGTAC---- 255
********************************************************
consensus_9737#0 GTGAAAGAACCCCCCCAAACCAAAACGTCACAAGGATCGGCAGAAACTAAAACTCACCCA 660
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 GGGCCGAAGCGTGCTGATGTGAAAGAGCCTCCCCAAGGCTCAGGGCATCCTCAGGTTAAA 720
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 GGATCCCCTGAGATAAAAACGCAACAGGTAAAAGGTGAACCTGAAACTAAAGATACACAA 780
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 GTCCAGCAGCAAACGAAGGGTTAGATAACACTGGGTGAAATAAAACGACTTGAACGACAG 840
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 TATATTCAACCTATTTTAACAGTTACATAGAAGAGTATGGCGATCACAACTTTAGAGGAC 900
consensus_9737#1 ------------------------------------------------------------
consensus_9737#0 TTATCAATCGTGCACCTAGCAATGAAATGCTTTGCAATAAAATTGTAAG 949
consensus_9737#1 -------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||