These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9753#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1406 fasta sequence [CCCCGAGGTTATCGTTCGTTTACATTTGTCCATTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG-TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATACG-TG-TCGAATGGCTACAGTGGATAG-CGTATACAACGAACATTGT--ATATTAA-AATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGA-AAGGGAAAG-AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCG-GCATGCTGCATGTGAGCG-GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC-AAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGTGTTGAAATTTTTGGAAAACAATTATTTTGGAATTGTGATAAACCAACAGCAACGATAGGCGATTTAAAAAATCTTTTGTTTCATTATATGTTTCTTTCGTTTGTTTGTTTTAAATTAAGCATCATTCTACGCGCCCATTAAATTCATCAAAATTAGTAACTAAATCTACTCAAATAATGAACATGCTCTCAACTTTAAAGGCAGCGTGTATGTGTGTGTTGTTGTTGTTGCATCGTGAACGTTTTTTTCGCACCAACGGGTGCCGTAAGGTAAAATTGTGAGTGGAAACAGAAACAAGAACAATCGGATAATAATAAACATGCCTCAAGCAATTGTGACACGGCGGAAAA] [+] EMBL AL693130 [CCCCGAGGTTATCGTTCGTTTACATTTGTCCATTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTC TTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGCAAAAAAA ACACACACACATATACATACACATACGTTGCTCGAATGGCTACAGTGGATGGCCGTATACAACGAACATTGTCNCTATTAACCATAACACTAAATTGTCGCACGCACAATTAGATAAATGTACGACAAGGGAAAGCAAGGGTGATAG AAAGCGTCCCGATGAAACGAAG TAGAc ] [+] EMBL CNS09HK5 [ CATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATACG TG TCGAATGGCTACAGTGGATAG CGTATACAACGAACATTGT ATATTAA AAT ] [+] EMBL CNS09G63 [ GGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTACTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAA ] [+] EMBL CNS09ENJ [ AAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTCGTG TTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGGTTTCATACTTACTGCTGTGTATTTGTTTTTCGTGTTTATTGCGAACGGCATAATGCTTCTAATAGTTTGCACTCACCACACCTCCTTTCCATGTCTGCCACGGGTAAAGATCACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTTAATGCTTATCAATTGGCGCTCAAACTACCCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATAC ] [+] EMBL BX607596 [ CCACAAATCACGTTTCGTAAACGGCAACAGTTGCCAGTATATGTATTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGCTAGCAAACTTCTATCTTACTTAAGGGGTTACGACAGAAAAAAAACACACACACACATATACACACACATACG TG TCGAATGGCTACAGTGGATAG CGTATACAACGAACATTGT ATATTAA AATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGA AAGGGAAAG AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGCACACGCGTGGGCAAAGAAGCG GCATGCTGCATGTGAGCG GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC AAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGTGTTGAAATTTTTGGAAAACAATTATTTTGGAATTGTGATAAACCAACAGCAACGA ] [-] EMBL CNS09ENK [ aTTACTTAAGGGGTTACGACAGAAAAAAAAAAAAAAAACACATATA AAAAACATACG TG TCGAATGGCTACAGTGGATAG CGTATACAACGAACATTGT ATATTAA AATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGA AAGGGAAAG AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTTGAACACGCGTGGGCAAAGAAGCG GCATGCTGCATGTGAGCGCGTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAAACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC AAAAAAAACCCTGTATTATTC ] [-] EMBL CNS09G64 [ AAGA AAGGGAAAG AAGGGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCGCGCATGCTGCATGTGAGCG GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGAC AAAAAAAACCCTGTATTATTCGATTTACTCATAAACGGTG ] [-] EMBL CNS09HK6 [ GTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCG GCATGCTGCATGTGAGCG GTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCTGGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGAATAGACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTCAGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCCTAAATTATGAAAACCCCTGACAAAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGTGTGGAAATTTTTGGAAAACAATTATTTTGGAATTGTGATAAACCAACAGCAACGATAGGCGATTTAAAAAATCTTTTGTTTCATTATATGTTTCTTTCGTTTGTTTGTTTTAAATTAAGCATCATTCTACGCGCCCATTAAATTCATCAAAATTAGTAACTAAATCTACTCAAATAATGAACATGCTCTCAACTTTAAAGGCAGCGTGTATGTGTGTGTTGTTGTTGTTGCATCGTGAACGTTTTTTTCGCACCAACGGGTGCCGTAAGGTAAAATTGTGAGTGGAAACAGAAACAAGAACAATCGGATAATAATAAACATGCCTCAAGCAATTGTGACACGGCGGAAAA] consensusID : consensus_9753#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1388 fasta sequence [CCGCCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA-GGGGCA-GGG-TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC-GGATACAGAT-GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT-CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGT-AAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAGACAGCAGTCCGTGGTATTGTGTTTCGCAACGGCACAAATTCGCTTAAAATCTTTTGATCTTTTTTTATCGAAATGAGGTAAAATCGTAAAATCAACCTATTAACGGTGTCACTCGCTAAAATTCACGAGTCAAGAATTGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCATTCGTTCATTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCT] [+] EMBL BM647402 [ CCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATTCCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGGCTTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACG ] [+] EMBL BM615008 [ CCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAAGGGGGCA GGG TTTCCAGGAGTTTTGC ] [+] EMBL BM596733 [ccgggaATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCAGGGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGATGGGGGGACGAGATGTCGAAGCGCAGCAAGTT ] [+] EMBL BM593578 [ccgggaATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGATGGGGGGACGAGATGTCGAAGCG ] [+] EMBL BM591401 [ ccgCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAG ] [+] EMBL BM622069 [ ccgGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCCGGGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGATCCGGGCCGGAAGTCGGTGTGATGCAGC ] [+] EMBL BM595471 [ CCG CGCGTTGCATTATCCTCCCGTGTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGTTTTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTATTGATGCTGAAGGCGAAGAACGTAGGGAAGCACTGGTGCTAGTTTGAGTAAATTGAATCTGGCGGAAGGTTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTAAAGTTGCGTGGCTCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTTTGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGTAGAGCAAATGGCCGAGAGCAAGCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT Cc ] [+] EMBL BX623985 [ GCCTCGCAAGATGGCATTGCCCACCTCGCTAGATAAGGATGCAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGT AAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAG ] [+] EMBL BM624989 [ ccgCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGTAAAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAGACAGCAGTCCGTGGTATTGTGTTTCGCAACGGCACAAA ] [+] EMBL BM640460 [ GTACGCTCCAATATGAGCGACCACGAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAA GGGGCA GGG TTTCCAGGAGTTTTGCGCCCAGTTTCACGACGACGAGCGGGCGTTCGGCTACATCC GGATACAGAT GGGGGACGAGATGTCGAAGCGCAGCAAGTTCCTGTTCCTCACCTGGAT CGGGCCGGAGGTCGGTGTGATGCAGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCTACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGG ] [+] EMBL BM647790 [ ccgGCGCGCCAAAATGTCCACCGACAAATCGATCATCAAGGATGTGATCAACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATCTCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTGGCGTGCGGGAGCTGTAACACTACCCAGGCGGTCGTAAAAAAAAAGGAGAAGCAAGGAGATGTTCGGCGGGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGGCCGGGTTTGGCCCTTCGACAGACTCACGCAACCCGCCAACCGTGTTCGGAGATGAAATGTGATCGCGTTACGGTAACATTCAAGACAGCAGTCCGTGGTATTGTGTTTCGCAACGGCACAAATTCGCTTAAAATCTTTTGATCTTTTTTTATCGAAATGAGGTAAAATCGTAAAATCAACCTATTAACGGTGTCACTCGCTAAAATTCACGAGTCAAGAATTGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCATTCGTTCATTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCT] consensusID : consensus_9753#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 303 fasta sequence [CCCCGAGGTTAAATCACGAGTCAGAATGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCGTTCGTTCGTTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACAACAAAAAAAAAAAAAAAA] [+] EMBL AL713821 [CCCCGAGGTTAAATCACGAGTCAGAATGAGTGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCGTTCGTTCGTTTACATTTGTCCATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTATTTGTGCAATCAATTTTAGCTCATCCTCCTCGCTATCGCCAATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTTCTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACAACAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9753#0 ------------------------------------------------------------ consensus_9753#2 CCCCGAGGTTAAATCACGAGTCAGAATGAGTGACACACATGCATGAGTTTTACTATAGAC 60 consensus_9753#1 ------------------------------------------------------------ consensus_9753#0 CCCCGAGGTTATCGTTCGTTTACATTTGTCCATTT-G---ACTGATTAAT--TTGTATTA 54 consensus_9753#2 TTTCGGCTCGTTCGTTCGTTTACATTTGTCCATTTTG---ACTGATTAAT--TTGTATTA 115 consensus_9753#1 CCGCCGATTCGTTGCCCTGCAAACCGTGTGAAGCTCGCTCGCCGGCAAACCGTCGCGTTG 60 * * * * * *** * * * * * ** * * ** consensus_9753#0 CATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTAT-TTGTGCAATCAATTTTAGC 113 consensus_9753#2 CATGGTGGGGAAAGCGGTAACTTAATCAAACATTTGTTAT-TTGTGCAATCAATTTTAGC 174 consensus_9753#1 CATTATCCTCCCGT--GTGCCGCGTTCCAGCATTGTTCGTCTTGTGTGTGCGTGTGTTGT 118 *** * ** * ** * **** * * ***** * * * * consensus_9753#0 TCATCCTC-TCGCTATCGCCA-ATAGGATATCGGAATTGGTATCGTCTCGTGTTTTTTTT 171 consensus_9753#2 TCATCCTCCTCGCTATCGCCA-ATAGGATATCGGAATTGGTATCGTCTTGTGTTTTTTTT 233 consensus_9753#1 T--TTTTTGTTGTTGTTGTTGTATTGAGTGTGTCCTTGTGCATTAT-TGATGCTGAAGGC 175 * * * * * * * * ** * * * * * ** * * ** * consensus_9753#0 CTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACGTATCCAGG 231 consensus_9753#2 CTTGTTTGTTGTTCCGGAGCCATTGATAACATGAGGTTTTTACTCCGTGACA-ACAAAAA 292 consensus_9753#1 GAAGAACGTAGGGA-AGCACTGGTGCTAGTTTGAGTAAATTGAATC-TGGCGGA---AGG 230 * ** * * * ** ** **** ** * ** * * * consensus_9753#0 TTTCATA----CTTACTGCTGTGT--ATTTGTTTTTCGTGTTTATTGCGAACGGCATAAT 285 consensus_9753#2 AAAAAAA----AAAA--------------------------------------------- 303 consensus_9753#1 TTTTACAGCGGCCCACGGCTTTGTCAACTTAGAAAAAAGGTCAAGTA-AAGTTGCGTGGC 289 * * * consensus_9753#0 GCTTCTAATAGTTTGCACTCAC-CACACCTCCTTTCCATGTCTGCC-ACGGGTAAAGATC 343 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TCAATTATCAGCACAAACACGCACACACCCGCACCCTTGGAATACCCACTATCAAACGTT 349 consensus_9753#0 ACAAAAAGTATATTGCTCACGGTTTTATTTAACTAACAGTGCCTT-AATGCTTATCAATT 402 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TGCTCAACGAGAGAAACAGCATCTCCACCGCATCAGCAGGATGTCCGACTCGGTTGAAGT 409 consensus_9753#0 GGCGCTCAAACTACCCACAAATCACGTTTCGTAA-ACGGCAACAGTTGCCAGTATATGTA 461 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 AGAGC--AAATGGCCGA--GAGCAAGCCTCGCAAGATGGCATTGCCCACC--TCGCTAGA 463 consensus_9753#0 TTAGTATAATCAATTGGCTAAGTGCGACAGGGTGGGCAAACAGCGGTTCCCTCTTTTTGC 521 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TAAGGATG--CAATTCGCGAAGCGTACGAGGACGTACGCTCCAATATGAGCGACC---AC 518 consensus_9753#0 TAGCAAACTTCTATCTTACTTAAGGGGTTACGA--CAGAAAAAAAACACACACACACATA 579 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 GAGTGGGCCGTGTTCAAGTTTGACGGGCTGAAAATCGTGTGCTCGGCCAAGGGGCAGGGT 578 consensus_9753#0 TACACACACATACGTGTCGAATGGCTACAGTGGATAGCG--TATACAACGAACATTGTAT 637 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TTCCAGGAGTTTTGCGCCCAGTTTC-ACGACGACGAGCGGGCGTTCGGCTACATCCGGAT 637 consensus_9753#0 ATTAAAATAACACTAAATTGTCGCACGCACAATTAGATAAATGTAAGAAAGGGAAAGAAG 697 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 ACAGATGGGGGACGAGAT-GTCG-AAGCGCAGCAAGTTCC-TGTTCCTCACCTGGATCGG 694 consensus_9753#0 GGTGATAGAAAAGCGTCCCGATGAAACGAAGTTAGAACACGCGTGGGCAAAGAAGCGGCA 757 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 GCCG----GAGGTCGGTGTGATGCAGCGC-GCCAAAATGTCCACCGACAAATCGAT--CA 747 consensus_9753#0 TGCTGCATGTGAGCGGTATCAACACCTTCCTAGGGGTTCAGAAGCTGAACTGGGCTCGCT 817 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TCAAGGATGTGATC---AACAACTTTGCCGTCGAGCTGCAGGTGGAAACGAGCGTCGATC 804 consensus_9753#0 GGAAGTGAACTTTGTGCGAGATGGAAATTGGACTATAGGGCAGCACCTACTTTGA-ATAG 876 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TCGATTTGGAAATGTTCAAGGCGCATCTGAACAAAGCTGGCGGCGCTAACTACGGCACTG 864 consensus_9753#0 ACACATGGCAATTCCTATAGGATTCCCAATGAGCTTGTCCAAAAAGGATGCCGTAGAGTC 936 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 GCGTGCGGGAG---CTGTAACACTACCCAGGCGGTCGTAAAAAAAAGGAGAAGCAAGG-- 919 consensus_9753#0 AGCTGCCCGCCACAGAAAAAGTCCACCTTCCCCTTTAAGAAAGAGTCAAGCAAGTGTCCC 996 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 AGATGTTCGGCG------GGCTCCTTAACATATCGCAATAGAACGTGAGCCGGCTGCCGG 973 consensus_9753#0 TAAATTATGAAAACCCCTGACAAAAAAAACCCTGTATTATTCGATTCACTCATAAACGGT 1056 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 CCGGGTTTGGC--CCTTCGACAGA------CTCACGCAACCCG--CCAACCGTGTTCGGA 1023 consensus_9753#0 GTTGAAATTT--TTGGAAAACAATTATTTTGGAATTGTGATAAACCAACA-GCAACGATA 1113 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 GATGAAATGTGATCGCGTTACGGTAACATTCAAG--ACAGCAGTCCGTGGTATTGTGTTT 1081 consensus_9753#0 GGCGATTTAAAAAATCT--TTTGTTTCATTATATGTTTCTTTCGTTTGTTTGTTTTAAAT 1171 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 CGCAACGGCACAAATTCGCTTAAAATCTTTTGATCTTTTTTTATCGAAATGAGGTAAAAT 1141 consensus_9753#0 TA-AGCATCATTCTACGCGCCCATTAAATTCATCAAAATTAGTAACTAAATCTACTCAAA 1230 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 CGTAAAATCAACCTAT-TAACGGTGTCACTCGCTAAAATTCACGAGTCAA--GAATTGAG 1198 consensus_9753#0 TAATGAACATGCTC----TCAACTTTAAAGGCAGCGTGTATGTGTGTGTTGTTGTTGTTG 1286 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 TGACACACATGCATGAGTTTTACTATAGACTTTCGGCTCATTCGTTCATTTACATTTGTC 1258 consensus_9753#0 CATCGTGAACGTTTTTTTCGCACCAACGGGTGCCGTAAGGTAAAATTGTGAGTGGAAACA 1346 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 CATTTTGACTGATTAATTTGTATTACATGGTGGGGAAAGCGGTAACTTAATCAAACATTT 1318 consensus_9753#0 GAAACAAGAACAATCGGATAATAATAAACATGCCTCAAGCAATTGTGACACGGCGGAAAA 1406 consensus_9753#2 ------------------------------------------------------------ consensus_9753#1 GTTATTTGTGCAATCAATTTTAGCTCATCCTCTCGCTATCGCCAATAGGATATCGGAATT 1378 consensus_9753#0 ---------- consensus_9753#2 ---------- consensus_9753#1 GGTATCGTCT 1388 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||