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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9759#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1345 fasta sequence
[TTTAGGAGTTTTTCGAGCGTACTGAAGAGTTTATTTCTTGCTCCATTGCAGAGCGATTTAGAGATAATAATTTTAAGCTGATACATATAAAG-TCGATATCAATCGTGGAGCCTTAGGCCACGAAAG-CCGCTTCAACCGTTAATCGCTTTGCTAATGACTGGAAGGAATGCCACTTTCGATAATCTCTAGTTTTGTCTCATGGAACCATTAAAAAAACGGTAAATAAACAAATACGTTGCATACTTTAGAAC-AAAACAAAA-CCATT-CCAACATGTATATTACACACTTCCTCAACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCATAGATTCATTCTCCACACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTGAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTCAAC-TTTCCCTTCAGATACTCTCCGTTCAGATTGCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCAGC-TCC-ATCACACCGTAGTTTAACGTTT-CCGC-TCCGATGCGGAACTTTTGATATC-GTGCCGCCAC-GCTCACTCC-ATCAAAATC-C-TCCATCACC-AC-AGCCAGCTCGTG-C-GGGGCCACAT-TCGTCAGCCGGTAGATC-TGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTC-GCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGG-ATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA-CGGCAGGACGCTCCC-AC-GGGCA-CT-GCCAAGCCCGGTA-CT-GCTGCTGGA-TTGCCCGACCCGTTCAA-CTGCATTCGCGTGAGCA-GCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTA-GGTGAGCAGATCCGACTCCAGA-CC-CTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGC-CAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAA-ACTAACATCAACTGCACGATTCAGACCTCGTGGCGATTCTGGCCT]
[+] EMBL CNS09C29 [TTTAGGAGTTTTTCGAGCGTACTGAAGAGTTTATTTCTTGCTCCATTGCAGAGCGATTTAGAGATAATAATTTTAAGCTGATACATATAAAGATCGATATCAATCGTGGAGCCTTAGGCCACGAAAGCCCGCTTCAACCGTTAATCGCTTTGCTAATGACTGGAAGGAATGCCACTTTCGATAATCTCTAGTTTTGTCTCATGGAACCATTAAAAAAACGGTAAATAAACAAATACGTTGCATACTTTAGAAC AAAACAAAA CCATT CCAACATGTATATTACACACTTCCTCAACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCATAGATTCATTCTCCACACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTTAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTCAAC TTTCCCTTCAGATACTCTCCGTTCAGATTGCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCA ]
[+] EMBL CNS09QXG [ GAGCGTACTGAAGAGTTTATTTCTTGCTCCATTGCAGAGCGATTTAGAGATAATAATTTTAAGCTGATACATATAAAG TCGATATCAATCGTGGAGCCTTAGGCCACGAAAG CCGCTTCAACCGTTAATCGCTTTGCTAATGACTGGAAGGAATGCCACTTTCGATAATCTCTAGTTTTGTCTCATGGAACCATTAAAAAAACGGTAAATAAACAAATACGTTGCATACTTTAGAAC AAAACAAAA CCATT CCAACATGTATATTACACACTTCCTCAACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCATAGATTCATTCTCCACACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTGAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTCAAC TTTCCCTTCAGATACTCTCCGTTCAGATTGCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCAGC TCC ATCACACCGTAGTTTAACGTTT CCGC TCCGATGCGGAACTTTTGATATC GTGCCGCCAC GCTCACTCC ATCAAAATC C TCCATCACC AC AGCCAGCTCGTG CGGGGGCCACAT TCGTCAGCCGGTAGATC TGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGAC ]
[-] EMBL BM617802 [ GAACAAAAACAAAACCCATTCCCAACATGTATATTAACCACTTCCTCAACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCATAGATTCATTCTCCACACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTGAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCTTCGGTTAAC TTTCCCTTCAGATACTCTCCGTTCAGATTGCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCAGC TCC ATCACACCGTAGTTTAACGTTT CCGC TCCGATGCGGAACTTTTGATATC GTGCCGCCAC GCTTACACC GTCAAAATC C TCCATCACC AC AGCCAGCTCGTG C GGGGCCACAT TCGTCAGCCGGTAGATC TGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTC GCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGG ATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA Ccgg ]
[-] EMBL BX619231 [ nACATTATCACTCTTCACTACAAACAGGCAACTGTGTCNTCTTACGGTCAAAGTAGTAGCAGCCAGCACAGATTCATTCTCNGCACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTGGATATTTGTCCCCACGGNAATCCATCCACATCAAACCCTGGGAGTCCT GGCCTCGGTTAACTTTTCCCTTCAGATACTCTCCGTTCAGATTGCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTATGTCGAGAAGCTTTCGTTCAGATGGATCCGCATCGCATCCCCCGCACCGCAAGGATTACAGCTGCCCAGC TCC ATCACACCGTAGTTTAACGTTT CCGC TCCGATGCGGAACTTTTGATATC GTGCCACCAC GCTCACTCC ATCAAAATC C TCCATCACC AC AGCCAGCTCGTG C GGGGCCACAT TCGTCAGCCGGTAGATC TGCTCTAATCCCAGCCAAAA ]
[-] EMBL CNS09QXF [ TTTGAGTGAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTCAAC TTTCCCTTCAGATACTCTCCGTTCAGATTGCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCAGC TCC ATCACACCGTAGTTTAACGTTT CCGC TCCGATGCGGAACTTTTGATATC GTGCCGCCAC GCTCACTCC ATCAAAATC C TCCATCACC AC AGCCAGCTCGTG C GGGGCCACAT TCGTCAGCCGGTAGATC TGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGTACCGTC GCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGG ATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA CGACAGAACGCTCCC AC GGGCA CT GCCAAGCCCGGTA CT GCTGCTGGA TTGCCCGACCCGTTCAA CTGCATTCGCGTGAGCA GCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTA GGTGAGCAGATCCGACTCCAGA CC CTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCATGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGC CAAGAATGGAACGCATCTCCAGGCGTGTTTTGTGCACTAA ACTAACATCAACTGCACGATTC ]
[-] EMBL AL693498 [ tGCAA GATTACATCTGCCCAGCTTCCAATCACACCGTAGTTNTACGTTTNCCGCTTCCGATGCGGAACTTTTGATATCGGTGCCGCCACTGCTTACACCGGTCAANATCGCGNCCATCACCAACAAGCCAGCTCGTGCC GGGNCCACATNTCGTTAGACGGTAGATCGTGCTCCAATCCTAGCC AACTCACCGTGCAGTGTGCCGAACCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCAGTTGAATGACGGTCCATCCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGAT GTCCGG ATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA CGGCAGGACGCTCCC ACAGGGCA CT GCCAGGCCCGGTA CT GCTGCAGGA TTGCCCGACCCGTTCAA CTGCATTCGCGTGAGCA GCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTA GGTGAGCAGATCCGACTCCAGA CCACTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCACAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAA ACTAACATCAACTGCACGATT ANACCTCG GGCGATTC ]
[-] EMBL BX469585 [ GATATC GTGCCGCCAC GCTTACACC GTCAAAATC C TCCATCACC AC AGCCAGCTCGTG C GGGGCCACAT TCGTTAGACGGTAGATC TGCTCCAATCCTAGCCAAAACTCACCGTGCAGTGTGCCGAACCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTC GTTGAATGACGGTCCATCCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGTATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA CGGCAGGACGCTCCC AC GGGCA CT GCCAGGCCCGGTA CT GCTGCAGGA TTGCCCGACCCGTTCAA CTGCATTCGCGTGAGCA GCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTA GGTGAGCAGATCCGACTCCAGA CC CTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGC CAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTNA ACTAACATCAACTGCACGATTCCGACCTCGTGNCGA ]
[-] EMBL CNS09C28 [ TC GTGCCGCCAC GCTAACTCC ATCAAAATC C TCCATCACC AC AGCCAGCTCGTG C GGGGCCACAT TCGTCAGCCGGTAGATC TGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGTACCGTC GCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGG ATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA CGACAGAACGCTCCC AC GGCA CT GCCAAGCCCGGTA CT GCTGCTGGA TTGCCCGACCCGTTCAA CTGCATTCGCGTGAGCA GCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTA GGTGAGCAGATCCGACTCCAGA CC CTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCATGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGC CAAGAATGGAACGCATCTCCAGGCGTGTTTTGTGCACTAA ACTAACATCAACTGCACGATTCGGAtatacaaaa ]
[-] EMBL BX605568 [ C TCCATCACC AC AGCCAGCTCGTG C GGGGCCACAT TCGTCAGCCGGTAGATC TGCTCTAATCCCAGCCAAAACTCACCGTGCAGTGTGCCAAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTC GTTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGG ATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCA CGACAGGACGCTCCC AC GGGCA CT GCCAAGCCCGGTA CT GCTGCTGGA TTGCCCGACCCGTTCAA CTGCATTCGCGTGAGCA GCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTA GGTGAGCAGATCCGACTCCAGA CC CTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAAATGATAAACACTATTAACAAGCTGC CAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAA ACTAACATCAACTGCA ]
[-] EMBL BX466523 [ CATCACCGNCAGGACGCTCCCTAC GGGCATCTCGCCAAGCCCGGTACCTNCCTGCTGGATTTGCCCGACCCGTTCAACCTGCATTCGCGTGAGCATGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTACGGTGAGCAGATCCGACTCCAGATCC CTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAAATGATAAACACTATTAACAAGCTGC CAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAGACTAACATCAACTGCACGATTTAGACCTCGT GCGATTCTGGCCT]
consensusID : consensus_9759#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1138 fasta sequence
[GTATATTAAACACTTCCTCAACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCACAGATTCATTCTCCGCACTATCACTTTATCGGGCGTATCATCATCTTTGTTGATTTGAGTGAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTTAACTTTCCCTTCAGATACTCTCCGTTCAGATTGCTGAAAGTATAC-AAAGTTCACACAAAACTGTACCCTCTACACCAGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTATGTCGAGAAGCTTTCGTTCAGATGGATCCGCATCGCATCCCCCGCACCGCAAGGATTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTCACTCCA-TCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTCAGCCGGTAGATCTGCTCTAATCCCAGCCAAAACTCACCGTGCAGTGTGCCAAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCGTTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGGCAGGACGCT-CCCACGGGCACTGCCAGGCC-CGGTACTGCTGCAGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATCAACTGCACGATTCGGATTTACTTCAACACCC]
[+] EMBL CNS09CY5 [GTATATTAAACACTTCCTCAACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCACAGATTCATTCTCCGCACTATCACTTTATCGGGCGTATCATCATCTTTGTTGATTTGAGTGAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTTAACTTTCCCTTCAGATACTCTCCGTTCAGATTGCTGAAAGTATAC AAAGTTCACACAAAACTGTACCCTCTACACCAGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTATGTCGAGAAGCTTTCGTTCAGATGGATCCGCATCGCATCCCCCGCACCGCAAGGATTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTCACTCCA TCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTCAGCCGGTAGATCTGCTCTAATCCCAGCCAAAACTCACCGTGCAGTGTGCCAAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCGTTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGAAAGGACGCT CCCACGGGCACTGCC ]
[+] EMBL CNS09DSP [ ACATTATCACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCACAGATTCATTCTCCGCACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTAAATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTTAACTTTCCCTTCAGATACTCTCCGTTCAGATTGCTGAAAGTATAC AAAGTTCACACAAAACTGT ]
[-] EMBL CNS09CY4 [ ACCCTGGGAGTCCTGGGCCTCGGTTAACTTTCTTTTTTTATACTCTCCGTTCAGATTGCTGAAAGTATACAAAAGTTCACACAAAACTGTACCCTCTACACCAGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTATGTCGAGAAGCTTTCGTTCAGATGGATCCGCATCGCATCCCCCGCACCGCAAGGATTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTCACTCCA TCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTCAGCCGGTAGATCTGCTCTAATCCCAGCCAAAACTCACCGTGCAGTGTGCCAAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCGTTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGACAGGACGCTGCCCACGGGCACTGCCAAGCCGCGGTACTGCTGCTGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAAATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCAC ]
[-] EMBL CNS09DSO [ TCTCCGTTCAGATTGCTGAAAGTATAC AAAGTTCACACAAAACTGTACCCTCTACACCAGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTATGTCGAGAAGCTTTCGTTCAGATGGATCCGCATCGCATCCCCCGCACCGCAAGGATTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTCACTCCATTCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTCAGCCGGTAGATCTGCTCTAATCCCAGCCAAAACTCACCGTGCAGTGTGCCAAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCGTTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGACAGGACGCT CCCACGGGCACTGCCAAGCC CGGTACTGCTGCTGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGGGAGTCGAGTCGGGCCGTGATCATCTCGTATCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAAATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATCAACTGCACGATTCGGATTTACTTCAACACCC]
[-] EMBL BM648760 [ TTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTTACACCG TCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTTAGACGGTAGATCTGCTCCAATCCTAGCCAAAACTCACCGTGCAGTGTGCCGAACCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCGTTGAATGACGGTCCATCCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGGCAGGACGCT CCCACGGGCACTGCCAGGCC CGGTACTGCTGCAGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATCAACTGCACGATTCGGcgg ]
[-] EMBL BX628992 [ TATCGTGCCGCCACGCTTACACCG TCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTTAGACGGTAGATCTGCTCCAATCCTAGCCAAAACTCACCGTGCAGTGTGCCGAACCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAACCGTCGTTGAATGACGGTCCATCCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGGCAGGACGCT CCCACGGGCACTGCCAGGCC CGGTACTGCTGCAGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACA ]
[-] EMBL BX604041 [ CGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGGCAGGACGCT CCCACGGGCACTGCCAGGCC CGGTACTGCTGCAGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATC ]
[-] EMBL BX605272 [ ACGGATGGTCGGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGGCAGGACGCT CCCACGGGCACTGCCAGGCC CGGTACTGCTGCAGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTATGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAA ]
[-] EMBL BX606805 [ CCCACGGGCACTGCCAGGCC CGGTACTGCTGCAGGATTGCCCGACCCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCGTTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATCATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATTAACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATCAACTGCACGATTC ]
consensusID : consensus_9759#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence
[CCACCCACGCGTCCGAAGCTATCTCACGCTTCATAAAGAAGAAGCGCCCTGCACAGCGTGGGGGTTTTAGACACCGCGAGGGAGCGAGCTCGGAAGGGGCGAACGTAACGGTCTCATCCGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTCACTCCATCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTCAGCCGGTAGATCTGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGTACCGTCGCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGACAGGACGCTCCC]
[+] EMBL BM655145 [CCACCCACGCGTCCGAAGCTATCTCACGCTTCATAAAGAAGAAGCGCCCTGCACAGCGTGGGGGTTTTAGACACCGCGAGGGAGCGAGCTCGGAAGGGGCGAACGTAACGGTCTCATCCGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAGAACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGATCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGATTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTTTGATATCGTGCCGCCACGCTCACTCCATCAAAATCCTCCATCACCACAGCCAGCTCGTGCGGGGCCACATTCGTCAGCCGGTAGATCTGCTCCAATCCCAGCCAAAACTCACCGTGCAGTGTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGTACCGTCGCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATCGGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACATCACGACAGGACGCTCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9759#0 TTTAGGAGTTTTTCGAGCGTACTGAAGAGTTTATTTCTTGCTCCATTGCAGAGCGATTTA 60
consensus_9759#1 ------------------------------------------------------------
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 GAGATAATAATTTTAAGCTGATACATATAAAGTCGATATCAATCGTGGAGCCTTAGGCCA 120
consensus_9759#1 ------------------------------------------------------------
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 CGAAAGCCGCTTCAACCGTTAATCGCTTTGCTAATGACTGGAAGGAATGCCACTTTCGAT 180
consensus_9759#1 ------------------------------------------------------------
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 AATCTCTAGTTTTGTCTCATGGAACCATTAAAAAAACGGTAAATAAACAAATACGTTGCA 240
consensus_9759#1 ------------------------------------------------------------
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 TACTTTAGAACAAAACAAAACCATTCCAACATGTATATTACACACTTCCTCAACATTATC 300
consensus_9759#1 --------------------------------GTATATTAAACACTTCCTCAACATTATC 28
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 ACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCAT 360
consensus_9759#1 ACTCTTCACTACAAACAGGCAACTGTGTCCTCTTACGGTCAAAGTAGTAGCAGCCAGCAC 88
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 AGATTCATTCTCCACACTATCACTTTATCGGTCGTATCATCATCTTTGTTGATTTGAGTG 420
consensus_9759#1 AGATTCATTCTCCGCACTATCACTTTATCGGGCGTATCATCATCTTTGTTGATTTGAGTG 148
consensus_9759#2 -------------------CCACCCACGCGTCCGAAGCTATCTCACGCTTCATAAAGAAG 41
*** ** ** * * ** ** ** *
consensus_9759#0 AATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTCA 480
consensus_9759#1 AATATTTGTCCCCACGGAAATCCATCCACATCAAACCCTGGGAGTCCTGGGCCTCGGTTA 208
consensus_9759#2 AA-----GCGCCCTGCACAGCGTGGGGGTTTTAGACACCGCGAGGGAGCGAGCTCGGAAG 96
** * *** * * * ** * * *** * *****
consensus_9759#0 ACTTTCCCTTCAGATACTCTCCGTTCAGATTGC--------------------------- 513
consensus_9759#1 ACTTTCCCTTCAGATACTCTCCGTTCAGATTGCTGAAAGTATACAAAGTTCACACAAAAC 268
consensus_9759#2 GGGCGAACGTAACGGTCTCATCCGGTGAATTGC--------------------------- 129
* * * *** * *****
consensus_9759#0 -------------------------------------------ATCGATGGCAGCGATAG 530
consensus_9759#1 TGTACCCTCTACACCAGGTGAATTGCAACACTTCTCACATACCATCGATGGCAGCGATAG 328
consensus_9759#2 --------------------------AACACTTCTCACATACCATCGATGGCAGCGATAG 163
*****************
consensus_9759#0 AACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGA 590
consensus_9759#1 AACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGA 388
consensus_9759#2 AACCACCAGCCGCCCTTAAACACCGCAGCACAGTTAAACGCCGCCTTGCTTCGATCGCGA 223
************************************************************
consensus_9759#0 TCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGA 650
consensus_9759#1 TCGTATGTCGAGAAGCTTTCGTTCAGATGGATCCGCATCGCATCCCCCGCACCGCAAGGA 448
consensus_9759#2 TCGTACGTCGAGAAGCTTTCGTTCAGGTGGATTCGCATCGAATCCCCCGCACCGCAAGGA 283
***** ******************** ***** ******* *******************
consensus_9759#0 TTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTT 710
consensus_9759#1 TTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTT 508
consensus_9759#2 TTACAGCTGCCCAGCTCCATCACACCGTAGTTTAACGTTTCCGCTCCGATGCGGAACTTT 343
************************************************************
consensus_9759#0 TGATATCGTGCCGCCACGCTCACTCCATCAAAATCCTCCATCACCACAGCCAGCTCGTGC 770
consensus_9759#1 TGATATCGTGCCGCCACGCTCACTCCATCAAAATCCTCCATCACCACAGCCAGCTCGTGC 568
consensus_9759#2 TGATATCGTGCCGCCACGCTCACTCCATCAAAATCCTCCATCACCACAGCCAGCTCGTGC 403
************************************************************
consensus_9759#0 GGGGCCACATTCGTCAGCCGGTAGATCTGCTCCAATCCCAGCCAAAACTCACCGTGCAGT 830
consensus_9759#1 GGGGCCACATTCGTCAGCCGGTAGATCTGCTCTAATCCCAGCCAAAACTCACCGTGCAGT 628
consensus_9759#2 GGGGCCACATTCGTCAGCCGGTAGATCTGCTCCAATCCCAGCCAAAACTCACCGTGCAGT 463
******************************** ***************************
consensus_9759#0 GTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAAC 890
consensus_9759#1 GTGCCAAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGAAC 688
consensus_9759#2 GTGCCGAATCCACGCTTGTAGTCCTGCCAGTCGCGGAAGAAGTTTACCGACCCATCGTAC 523
***** *************************************************** **
consensus_9759#0 CGTCGCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATC 950
consensus_9759#1 CGTCGTTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATC 748
consensus_9759#2 CGTCGCTGAATGACGGTCCAACCGCCACCTTCGTACTGCTGATCGCACAGTACCGTCATC 583
***** ******************************************************
consensus_9759#0 GGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACA 1010
consensus_9759#1 GGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACA 808
consensus_9759#2 GGCTCGTTGAACGGATGGTCCGGATCGATACGATAGATGCCGGACACGCGGGAGGGAACA 643
************************************************************
consensus_9759#0 TCACGGCAGGACGCTCCCACGGGCACTGCCAAGCCCGGTACTGCTGCTGGATTGCCCGAC 1070
consensus_9759#1 TCACGGCAGGACGCTCCCACGGGCACTGCCAGGCCCGGTACTGCTGCAGGATTGCCCGAC 868
consensus_9759#2 TCACGACAGGACGCTCCC------------------------------------------ 661
***** ************
consensus_9759#0 CCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCG 1130
consensus_9759#1 CCGTTCAACTGCATTCGCGTGAGCAGCTGTACCATCTTGGACAGCTGCTGTACCGTGTCG 928
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 TTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGGGAGTCGAGTCGGGCCGTGATC 1190
consensus_9759#1 TTGGTGTAGGTGAGCAGATCCGACTCCAGACCCTGCAGCGAGTCGAGTCGGGCCGTGATC 988
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 ATCTCGTATCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATT 1250
consensus_9759#1 ATCTCGTACCCATAGCCGGAACCTTGTGATTCAGTCTCGAAACAGATGATAAACACTATT 1048
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 AACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATCA 1310
consensus_9759#1 AACAAGCTGCCAAGAATGGAACGCATCTCCAGGCGTGTTTTGCGCACTAAACTAACATCA 1108
consensus_9759#2 ------------------------------------------------------------
consensus_9759#0 ACTGCACGATTCAGACCTCGTGGCGATTCTGGCCT 1345
consensus_9759#1 ACTGCACGATTCGGATTTACTT-CAACACCC---- 1138
consensus_9759#2 -----------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||