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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1257 fasta sequence
[GGCCAGAATCGGGCACGAGTGG--GGGGACGGC-AACGTA-CCAGACAG-C-AAAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA-CGAAAACACTT--G--TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC-GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA-GCAAACGTTTAAAACAGATGAATCCAACCA-GAAGCTGTACGTTTCTATAATGGCCGG-CGTTACGCTTGGTCGACT-GGAGCA-GGGGCTGG-CG-AT-GTTT-CAGCCATGC-TTGATAG-CCCG-TG-CCAT-GCCCAACACTCCG-AT-GCAGGT-CGG-TGTTGGC-TGTAC-GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT-AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACGGGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATAACTCATACCATGCCATTGTTTTTTTTTCATATTCATCAATATAAAGACAAATAAATCGATCCTTTTTTCTTGATATGGTTAAAAAAAA]
[+] EMBL BX469003 [GGCCAGAATCGGGCACGAGTGGACGGGGACGGC AACGTAGCCAGACAGAA AAAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATACCGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGGCAAACGTTTAAAACAGATGAATCCAACCAGGAAGCTGTACGTTTCTATAATGGCCGGNCGTTACGCTTGGTCGACTGGGAGCA GGGGCTGGACGAATAGTTTNCAGCCATGCTTTGATAGNCCCGTTG CCATGGCCCAACACTCCG ATGGCAGGTCCGGAGGTAGGCATGTACGGGTGTA ]
[+] EMBL AL932558 [ tcgccgaGG GGGGACGGC AACGTAGCCAGACAG CAAAAAAAACGAAGGC AAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTTTGGTTTCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCG ]
[+] EMBL CNS09KH4 [ GGGACGGCAAACGTA CCAGATAG C AAAAAAACG AGGCAAAGATTATCTTTCATCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGGTTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCATTC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAAAGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGG ]
[+] EMBL BX605461 [ GACGGCAAACGTAGTCAGACAG CAAAAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCCTCCGATA CGAAAACGCTT G TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGTTTGTTTATCGTCAACATTGTCGCGCCCCT GCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACGATCAATTAGGAACCGATTTCTACGGAACCAATTCCGGCCAGGCAAAATGTCATCCCCTGCTGCGCTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCGTACGCCATCGCGTCCGGATTATTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAA ]
[+] EMBL CNS09A9W [ aGGC AACGTG CCAGATAG C AAAAAAACG AGGCAAAGATTATCTTTCATCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGGTTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATTGCA ]
[+] EMBL BX607536 [ tag CCAGATAG C AAAAAAACGAAGGCAAAGATTATCTTTCATCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGCGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCATTC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGTT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCG ]
[+] EMBL BM595859 [ c cgAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCAGGGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCGAATGGCAGGT CGG TG ]
[+] EMBL BX622008 [ TACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACG ]
[+] EMBL BX626150 [ AGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGC ]
[+] EMBL AGA282225 [ GACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGT ]
[+] EMBL BX624701 [ CCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAAGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCANGGCATTCCGCGTGACATGGCGCTGCAGCT ]
[+] EMBL BX611474 [ AGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTT ]
[+] EMBL BX614320 [ CCGGCTAGTCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGTAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTTAAAGCAGG ]
[+] EMBL BX616780 [ TGCTGCGCTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCGTACGCCATCGCGTCCGGATTATTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTATAAAGCGGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCTGG TGTTACGCTTGATCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCT AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTTGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCTGGCTGTGGTCCGGCGTACGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCCCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGAAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACTGGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATG ]
[-] EMBL CNS09KH5 [ GTTGAGCAAAGGAGTGCTGCAACCGGATCAAATTACTGTGTCCGCCACACGGCTGGAAAATCTGAAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCATTC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TGTCCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACGCGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATAACTCATACCATGCCATTGTTTTTTTTTCATATTCATCAATATAAAGACAAATAAATCGATCCTTTTTTCT ]
[-] EMBL AGA280522 [ GGCGCTGCAGCTGGCCGCCCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACGGGGTACATGCGCTCGAGCAAGGTTCGATGCGAGGCACGGTCATGAATGCGGTCGAGAGTGCCACTAAACGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATAACTCATACCATGCCATTG TTTTTATCATATTCATCAATATAAAGACAAATAAATAGATCCTTTTTTTCTGATATGGTTAAAAAAAA]
[-] EMBL CNS09A9X [ CATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATCACTCATACCAT ]
consensusID : consensus_9790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 608 fasta sequence
[AATCCGCACGANNGTACATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTCTATAATGGCCGGCGTTACGCTTGGTCGAC-TG-GAGCAGGGGCTGGCGATGTTTCAGGCCATGC-TTGAT-AGCCCGTGCC-ATGCCCAACACGTCCGATGCAGGTCGGTGTT-GGC-TGT-ACGGTGTACTGTC-GCACGGGATCGGACCATCACTTGTTCCCGGCCACTGTACCCGCGGATATGCAACACCANTGTTTTGNGGNGGCTAAGGCCGGTTTGTTGCACGAGGTTGGCAGGAAAACGTAAAGATTGAACGCCCTGTAACCGGGCTGGGGCGGGCTGTGGTTCCNGGGTAATTGTGTACGAGTTTT]
[+] EMBL BX466268 [AATCCGCACGANNGTACATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTCTATAATGGCCGGCGTTACGCTTGGTCGAC TG GAGCAGGGGCTGGCGATGTTTCAGGCCATGC TTGAT AGCCCGTGCC ATGCCCAACACGTCCGATGCAGGTCGGTGTT GGC TGT ACGGTGTACTGTC GCACGGGATC ]
[+] EMBL AL694585 [ gagGTTCGGATTGTTGAGC AAGGAGTGCTGCAA CGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGCAAACGTTT ACAGATGAATCCAA CAGAAGCTGTACG TCTATAATGG CGG GTTACGCTTGGTCGACTTGTGAGCAGGGGCTGGCGATGTTTCA AACATGCTTTGATAAGCCCGTGCCAATGNCCAACACTCCCGATGCAGGTCGGTGTTGGGCTTGTAACGGTGTACTGTCGGCACGGGATCGGACCATCACTTGTTCCCGGCCACTGTACCCGCGGATATGCAACACCANTGTTTTGNGGNGGCTAAGGCCGGTTTGTTGCACGAGGTTGGCAGGAAAACGTAAAGATTGAACGCCCTGTAACCGGGCTGGGGCGGGCTGTGGTTCCNGGGTAATTGTGTACGAGTTTT]
consensusID : consensus_9790#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence
[GCAAGAATCCGCACGAGTGGCGCGTCGGCGTTTGTTAGGATAACCTCCCGATACGAAAACACTTGTCGTCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTAGTTGATCGTCCAACATTGTCGCGCCCCTGGCCTNAAGTAGCGCGGTGTAGAGTNAATCGAAANACCGGAGNCACAATGCACTTTGGAACCGCATTTACCACGGGGGAACATAAATTACCGGGGCAGGGGCGAAGAAATGGTTCGGNGCCGTCCTGCACGTTGGGCGANCTTTAACACAACAACAGGTTGTNCAAAAAAATCTCGGGGTCCGANGGTACCTGTCCAATTTATCGCGACTGAGGCNGGGTACACTTAATTGGGGCGCATTTAACAGACCCCNAATCCGGACGGGTTATCGGGNGAACTATTATGGNTTTGGCANGGGCACAGAAGCGAGNAAGGGTNCTCTGGCAGGAACCAGGGGAGTTCCACGCGCNAGTTTGTAC]
[+] EMBL BX468776 [GCAAGAATCCGCACGAGTGGCGCGTCGGCGTTTGTTAGGATAACCTCCCGATACGAAAACACTTGTCGTCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTAGTTGATCGTCCAACATTGTCGCGCCCCTGGCCTNAAGTAGCGCGGTGTAGAGTNAATCGAAANACCGGAGNCACAATGCACTTTGGAACCGCATTTACCACGGGGGAACATAAATTACCGGGGCAGGGGCGAAGAAATGGTTCGGNGCCGTCCTGCACGTTGGGCGANCTTTAACACAACAACAGGTTGTNCAAAAAAATCTCGGGGTCCGANGGTACCTGTCCAATTTATCGCGACTGAGGCNGGGTACACTTAATTGGGGCGCATTTAACAGACCCCNAATCCGGACGGGTTATCGGGNGAACTATTATGGNTTTGGCANGGGCACAGAAGCGAGNAAGGGTNCTCTGGCAGGAACCAGGGGAGTTCCACGCGCNAGTTTGTAC]
consensusID : consensus_9790#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence
[TTGCCCCAGGGTTTTACTGGAAAATCTTGCAGGCACGCTGGGCCCGCTTGNGGTACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGACACAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAGGGGCTGGCGATGTNTCAGCCATGCTTGATAGCCCGTGCATGCCAAACACATCCGATGCAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCAACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGNCGCTAGGCGTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGTACCGGGCT]
[+] EMBL AL697597 [TTGCCCCAGGGTTTTACTGGAAAATCTTGCAGGCACGCTGGGCCCGCTTGNGGTACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGACACAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAGGGGCTGGCGATGTNTCAGCCATGCTTGATAGCCCGTGCATGCCAAACACATCCGATGCAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCAACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGNCGCTAGGCGTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGTACCGGGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 GGCCAGAATCGGGCACGAGTGGGGGGACGGCAACGTACCAGACAGCAAAAAAACGAAGGC 60
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 AAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA 120
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 CGAAAACACTTGTCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTC 180
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 AACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACA 240
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 ATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGC 300
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 --------------AATCCGCACGANNGTACATTGGTGGCGGTAATATGGCATACGCCAT 46
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 TGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCAT 360
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 CGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCAC 106
consensus_9790#3 -----------------------------------------------TTGC-CCCAGGGT 12
consensus_9790#0 CGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCAC 420
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ACGGCTGGAAAATCT-GCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTG 165
consensus_9790#3 TTTACTGGAAAATCTTGCAGGCACGCTGGGCCC-GCTTGNGGTA-CGCGAACGACCATTG 70
consensus_9790#0 ACGGCTGGAAAATCT-GCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTG 479
consensus_9790#2 ------GCAAGAATCCGCACGAGTGGCGCGTCG-GCGTTTGTTAGGATAACCTCCCGATA 53
* ** * *** * * * * * ** * * ** * * ** *
consensus_9790#1 ACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGAT-G 224
consensus_9790#3 ACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGAT-G 129
consensus_9790#0 ACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGAT-G 538
consensus_9790#2 CGAAAACACTTGTCGTCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTAGTTGATCG 113
** * *** ** * * * * * * ** ** * *** *
consensus_9790#1 TTCGACCACGTGTTGAAA--GACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAAT 282
consensus_9790#3 TTCGACCACGTGTTGACACAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAAT 189
consensus_9790#0 TTCGACCACGTGTTGAAA--GACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAAT 596
consensus_9790#2 TCCAACATTGTCGCGCCCCTGGCCTNAAGTAGC-GCGGTGTA-GAGTNAATCGAAANACC 171
* * ** ** * * * * ** * * * * * ** * * *
consensus_9790#1 CCAACCAGAA-GCTGTACGTT-CTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAG 340
consensus_9790#3 CCAACCAGAA-GCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAG 248
consensus_9790#0 CCAACCAGAA-GCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAG 655
consensus_9790#2 GGAGNCACAATGCACTTTGGAACCGCATTTACCACGGGGGAACATAAATTACCGGGGCAG 231
* ** ** ** * * * * * ** * * * ** ** ****
consensus_9790#1 GGGCTG-GCGATGTTTCAGGCCATGCTTGATAGCCCGTGCCATGCCCAACACGTCCGATG 399
consensus_9790#3 GGGCTG-GCGATGTNTCAG-CCATGCTTGATAGCCCGTGC-ATGCCAAACACATCCGATG 305
consensus_9790#0 GGGCTG-GCGATGTTTCAG-CCATGCTTGATAGCCCGTGCCATGCCCAACAC-TCCGATG 712
consensus_9790#2 GGGCGAAGAAATGGTTCGG-NGCCGTCCTGCACGTTGGGCGANCTTTAACACAACAACAG 290
**** * *** ** * * * * ** * ***** * *
consensus_9790#1 CAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCA-CGGGATCGGACCATCACTTGTTCCC 458
consensus_9790#3 CAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCAACGGGATCGGACCATC--CTGTCCC- 362
consensus_9790#0 CAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCA-CGGGATCGGACCATC--CTGTCCC- 768
consensus_9790#2 GTTGTNCAAAAAAATCTCGGGGTCCGANGGTACCTGTCCAATTTATCGCGACTGAGGCNG 350
** *** * * * * * *
consensus_9790#1 GGC-CACTGTACCCGCGGATATGCAACA--CCANTGTTTTGNGGNGGCTAAGGCCGGTTT 515
consensus_9790#3 -GC-CACTGTACC-GCG-ATATGCA-CA--CCATG--TTTGCGGNCGCTAGGCGTG---- 409
consensus_9790#0 -GC-CACTGTACC-GCG-ATATGCA-CA--CCATG--TTTGCGGC-GCTAGGCGTTG--- 815
consensus_9790#2 GGTACACTTAATTGGGGCGCATTTAACAGACCCCNAATCCGGACGGGTTATCGGGNGAAC 410
* **** * * * ** * ** ** * * * **
consensus_9790#1 GTTGCACGAGGTTGGCAGGAAAACGTAAAGATTGAACGCCCTGTAACCGGGCTGGGGCGG 575
consensus_9790#3 --TGCACGAGGTGG--AGGAAAGT---AAGAT-GAACGCCGT---ACCGGGCT------- 451
consensus_9790#0 --TGCACGAGGTGG--AGGAAAGT---AAGAT-GAACGCCGC--TACCGGGCTG--GCCG 863
consensus_9790#2 TAT-TATGGNTTTGGCANGGGCACAGAAGCGAGNAAGGGTNC----TCTGGCAGGAACCA 465
* * * * * * * * ** * * ***
consensus_9790#1 GCTGTGGTTCCNGGGTAATTGTGTACGAGTTTT--------------------------- 608
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 GCTGTGGTCC---GGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTTA 920
consensus_9790#2 GGGGAGTTCCACGCGCNAGTTTGTAC---------------------------------- 491
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 AGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGG 980
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 CCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGC 1040
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 CCGGCGGTGCAACGATACACGGGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGG 1100
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 TGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGT 1160
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 ------------------------------------------------------------
consensus_9790#3 ------------------------------------------------------------
consensus_9790#0 TTGAGTATAACTCATACCATGCCATTGTTTTTTTTTCATATTCATCAATATAAAGACAAA 1220
consensus_9790#2 ------------------------------------------------------------
consensus_9790#1 -------------------------------------
consensus_9790#3 -------------------------------------
consensus_9790#0 TAAATCGATCCTTTTTTCTTGATATGGTTAAAAAAAA 1257
consensus_9790#2 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||