These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1257 fasta sequence [GGCCAGAATCGGGCACGAGTGG--GGGGACGGC-AACGTA-CCAGACAG-C-AAAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA-CGAAAACACTT--G--TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC-GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA-GCAAACGTTTAAAACAGATGAATCCAACCA-GAAGCTGTACGTTTCTATAATGGCCGG-CGTTACGCTTGGTCGACT-GGAGCA-GGGGCTGG-CG-AT-GTTT-CAGCCATGC-TTGATAG-CCCG-TG-CCAT-GCCCAACACTCCG-AT-GCAGGT-CGG-TGTTGGC-TGTAC-GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT-AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACGGGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATAACTCATACCATGCCATTGTTTTTTTTTCATATTCATCAATATAAAGACAAATAAATCGATCCTTTTTTCTTGATATGGTTAAAAAAAA] [+] EMBL BX469003 [GGCCAGAATCGGGCACGAGTGGACGGGGACGGC AACGTAGCCAGACAGAA AAAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATACCGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGGCAAACGTTTAAAACAGATGAATCCAACCAGGAAGCTGTACGTTTCTATAATGGCCGGNCGTTACGCTTGGTCGACTGGGAGCA GGGGCTGGACGAATAGTTTNCAGCCATGCTTTGATAGNCCCGTTG CCATGGCCCAACACTCCG ATGGCAGGTCCGGAGGTAGGCATGTACGGGTGTA ] [+] EMBL AL932558 [ tcgccgaGG GGGGACGGC AACGTAGCCAGACAG CAAAAAAAACGAAGGC AAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTTTGGTTTCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCG ] [+] EMBL CNS09KH4 [ GGGACGGCAAACGTA CCAGATAG C AAAAAAACG AGGCAAAGATTATCTTTCATCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGGTTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCATTC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAAAGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGG ] [+] EMBL BX605461 [ GACGGCAAACGTAGTCAGACAG CAAAAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCCTCCGATA CGAAAACGCTT G TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGTTTGTTTATCGTCAACATTGTCGCGCCCCT GCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACGATCAATTAGGAACCGATTTCTACGGAACCAATTCCGGCCAGGCAAAATGTCATCCCCTGCTGCGCTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCGTACGCCATCGCGTCCGGATTATTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAA ] [+] EMBL CNS09A9W [ aGGC AACGTG CCAGATAG C AAAAAAACG AGGCAAAGATTATCTTTCATCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGGTTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATTGCA ] [+] EMBL BX607536 [ tag CCAGATAG C AAAAAAACGAAGGCAAAGATTATCTTTCATCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGCGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCATTC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGTT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCG ] [+] EMBL BM595859 [ c cgAAAAACGAAGGCAAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA CGAAAACACTT G TCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCAGGGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCGAATGGCAGGT CGG TG ] [+] EMBL BX622008 [ TACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACG ] [+] EMBL BX626150 [ AGCGCGACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGC ] [+] EMBL AGA282225 [ GACGCGTGTGTGTTGATTGTTTATCGTCAACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGT ] [+] EMBL BX624701 [ CCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACAATCAATTAGGAACCGATTTCCACGGAACTAATTCCGGCCAAGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCANGGCATTCCGCGTGACATGGCGCTGCAGCT ] [+] EMBL BX611474 [ AGGTGAATCGAAAACCGACCACAATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTT ] [+] EMBL BX614320 [ CCGGCTAGTCAAAATGTCGTCCTCTGCTGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGTAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTTAAAGCAGG ] [+] EMBL BX616780 [ TGCTGCGCTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCGTACGCCATCGCGTCCGGATTATTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCAATC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTATAAAGCGGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCTGG TGTTACGCTTGATCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TG CCAT GCCCAACACTCCT AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTTGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCTGGCTGTGGTCCGGCGTACGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCCCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGAAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACTGGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATG ] [-] EMBL CNS09KH5 [ GTTGAGCAAAGGAGTGCTGCAACCGGATCAAATTACTGTGTCCGCCACACGGCTGGAAAATCTGAAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCGTTGACAACGCGGAAGTCATCCTGCATTC GGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAA GCAAACGTTTAAAACAGATGAATCCAACCA GAAGCTGTACGTTTCTATAATGGCCGG CGTTACGCTTGGTCGACT GGAGCA GGGGCTGG CG AT GTTT CAGCCATGC TTGATAG CCCG TGTCCAT GCCCAACACTCCG AT GCAGGT CGG TGTTGGC TGTAC GGTGTACTGTCGCACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGCGCTAGGCGTTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGCTACCGGGCTGGCCGGCTGTGGTCCGGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTT AAGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACGCGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATAACTCATACCATGCCATTGTTTTTTTTTCATATTCATCAATATAAAGACAAATAAATCGATCCTTTTTTCT ] [-] EMBL AGA280522 [ GGCGCTGCAGCTGGCCGCCCAGACGGTGATGGGTGCGGCCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGCCCGGCGGTGCAACGATACACGGGGTACATGCGCTCGAGCAAGGTTCGATGCGAGGCACGGTCATGAATGCGGTCGAGAGTGCCACTAAACGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATAACTCATACCATGCCATTG TTTTTATCATATTCATCAATATAAAGACAAATAAATAGATCCTTTTTTTCTGATATGGTTAAAAAAAA] [-] EMBL CNS09A9X [ CATGCGCTCGAGCAGGGTTCGATGCGCGGCACGGTGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGTTTGAGTATCACTCATACCAT ] consensusID : consensus_9790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 608 fasta sequence [AATCCGCACGANNGTACATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTCTATAATGGCCGGCGTTACGCTTGGTCGAC-TG-GAGCAGGGGCTGGCGATGTTTCAGGCCATGC-TTGAT-AGCCCGTGCC-ATGCCCAACACGTCCGATGCAGGTCGGTGTT-GGC-TGT-ACGGTGTACTGTC-GCACGGGATCGGACCATCACTTGTTCCCGGCCACTGTACCCGCGGATATGCAACACCANTGTTTTGNGGNGGCTAAGGCCGGTTTGTTGCACGAGGTTGGCAGGAAAACGTAAAGATTGAACGCCCTGTAACCGGGCTGGGGCGGGCTGTGGTTCCNGGGTAATTGTGTACGAGTTTT] [+] EMBL BX466268 [AATCCGCACGANNGTACATTGGTGGCGGTAATATGGCATACGCCATCGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTCTATAATGGCCGGCGTTACGCTTGGTCGAC TG GAGCAGGGGCTGGCGATGTTTCAGGCCATGC TTGAT AGCCCGTGCC ATGCCCAACACGTCCGATGCAGGTCGGTGTT GGC TGT ACGGTGTACTGTC GCACGGGATC ] [+] EMBL AL694585 [ gagGTTCGGATTGTTGAGC AAGGAGTGCTGCAA CGGATCAGATTACTGTGTCCGCCACACGGCTGGAAAATCTGCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGAAAGACTTGGCAAAGTTGAAGCAAACGTTT ACAGATGAATCCAA CAGAAGCTGTACG TCTATAATGG CGG GTTACGCTTGGTCGACTTGTGAGCAGGGGCTGGCGATGTTTCA AACATGCTTTGATAAGCCCGTGCCAATGNCCAACACTCCCGATGCAGGTCGGTGTTGGGCTTGTAACGGTGTACTGTCGGCACGGGATCGGACCATCACTTGTTCCCGGCCACTGTACCCGCGGATATGCAACACCANTGTTTTGNGGNGGCTAAGGCCGGTTTGTTGCACGAGGTTGGCAGGAAAACGTAAAGATTGAACGCCCTGTAACCGGGCTGGGGCGGGCTGTGGTTCCNGGGTAATTGTGTACGAGTTTT] consensusID : consensus_9790#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence [GCAAGAATCCGCACGAGTGGCGCGTCGGCGTTTGTTAGGATAACCTCCCGATACGAAAACACTTGTCGTCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTAGTTGATCGTCCAACATTGTCGCGCCCCTGGCCTNAAGTAGCGCGGTGTAGAGTNAATCGAAANACCGGAGNCACAATGCACTTTGGAACCGCATTTACCACGGGGGAACATAAATTACCGGGGCAGGGGCGAAGAAATGGTTCGGNGCCGTCCTGCACGTTGGGCGANCTTTAACACAACAACAGGTTGTNCAAAAAAATCTCGGGGTCCGANGGTACCTGTCCAATTTATCGCGACTGAGGCNGGGTACACTTAATTGGGGCGCATTTAACAGACCCCNAATCCGGACGGGTTATCGGGNGAACTATTATGGNTTTGGCANGGGCACAGAAGCGAGNAAGGGTNCTCTGGCAGGAACCAGGGGAGTTCCACGCGCNAGTTTGTAC] [+] EMBL BX468776 [GCAAGAATCCGCACGAGTGGCGCGTCGGCGTTTGTTAGGATAACCTCCCGATACGAAAACACTTGTCGTCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTAGTTGATCGTCCAACATTGTCGCGCCCCTGGCCTNAAGTAGCGCGGTGTAGAGTNAATCGAAANACCGGAGNCACAATGCACTTTGGAACCGCATTTACCACGGGGGAACATAAATTACCGGGGCAGGGGCGAAGAAATGGTTCGGNGCCGTCCTGCACGTTGGGCGANCTTTAACACAACAACAGGTTGTNCAAAAAAATCTCGGGGTCCGANGGTACCTGTCCAATTTATCGCGACTGAGGCNGGGTACACTTAATTGGGGCGCATTTAACAGACCCCNAATCCGGACGGGTTATCGGGNGAACTATTATGGNTTTGGCANGGGCACAGAAGCGAGNAAGGGTNCTCTGGCAGGAACCAGGGGAGTTCCACGCGCNAGTTTGTAC] consensusID : consensus_9790#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence [TTGCCCCAGGGTTTTACTGGAAAATCTTGCAGGCACGCTGGGCCCGCTTGNGGTACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGACACAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAGGGGCTGGCGATGTNTCAGCCATGCTTGATAGCCCGTGCATGCCAAACACATCCGATGCAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCAACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGNCGCTAGGCGTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGTACCGGGCT] [+] EMBL AL697597 [TTGCCCCAGGGTTTTACTGGAAAATCTTGCAGGCACGCTGGGCCCGCTTGNGGTACGCGAACGACCATTGACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGATGTTCGACCACGTGTTGACACAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAATCCAACCAGAAGCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAGGGGCTGGCGATGTNTCAGCCATGCTTGATAGCCCGTGCATGCCAAACACATCCGATGCAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCAACGGGATCGGACCATCCTGTCCCGCCACTGTACCGCGATATGCACACCATGTTTGCGGNCGCTAGGCGTGTGCACGAGGTGGAGGAAAGTAAGATGAACGCCGTACCGGGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 GGCCAGAATCGGGCACGAGTGGGGGGACGGCAACGTACCAGACAGCAAAAAAACGAAGGC 60 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 AAAGATTATCTTTCGTCGGCGGAAAAGTGCGCGTCGCGTTTGTTAGATAACCTCCCGATA 120 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 CGAAAACACTTGTCGCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTGTTTATCGTC 180 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 AACATTGTCGCGCCCCTGGCCCTGAAGTTGCGCGTGTAGGTGAATCGAAAACCGACCACA 240 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 ATCAATTTGGAACCGATTTCCACGGAACTAATTCCGGCCAGGCAAAATGTCGTCCTCTGC 300 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 --------------AATCCGCACGANNGTACATTGGTGGCGGTAATATGGCATACGCCAT 46 consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 TGCACTACAAAAGTGCAAAGCGGTCGGTTTCATTGGTGGCGGTAATATGGCATACGCCAT 360 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 CGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCAC 106 consensus_9790#3 -----------------------------------------------TTGC-CCCAGGGT 12 consensus_9790#0 CGCGTCCGGATTGTTGAGCAAAGGAGTGCTGCAACCGGATCAGATTACTGTGTCCGCCAC 420 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ACGGCTGGAAAATCT-GCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTG 165 consensus_9790#3 TTTACTGGAAAATCTTGCAGGCACGCTGGGCCC-GCTTGNGGTA-CGCGAACGACCATTG 70 consensus_9790#0 ACGGCTGGAAAATCT-GCAGGCACGCTGGGCCCCGCTTGGGGTAACGCGAACGACCATTG 479 consensus_9790#2 ------GCAAGAATCCGCACGAGTGGCGCGTCG-GCGTTTGTTAGGATAACCTCCCGATA 53 * ** * *** * * * * * ** * * ** * * ** * consensus_9790#1 ACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGAT-G 224 consensus_9790#3 ACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGAT-G 129 consensus_9790#0 ACAACGCGGAAGTCATCCTGCAATCGGACGTCGTTTTCATCTGCGTAAAGCCACAGAT-G 538 consensus_9790#2 CGAAAACACTTGTCGTCGTTGATATACAAGCGCGACGCGTGTGTGTTGATTAGTTGATCG 113 ** * *** ** * * * * * * ** ** * *** * consensus_9790#1 TTCGACCACGTGTTGAAA--GACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAAT 282 consensus_9790#3 TTCGACCACGTGTTGACACAGACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAAT 189 consensus_9790#0 TTCGACCACGTGTTGAAA--GACTTGGCAAAGTTGAAGCAAACGTTTAAAACAGATGAAT 596 consensus_9790#2 TCCAACATTGTCGCGCCCCTGGCCTNAAGTAGC-GCGGTGTA-GAGTNAATCGAAANACC 171 * * ** ** * * * * ** * * * * * ** * * * consensus_9790#1 CCAACCAGAA-GCTGTACGTT-CTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAG 340 consensus_9790#3 CCAACCAGAA-GCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAG 248 consensus_9790#0 CCAACCAGAA-GCTGTACGTTTCTATAATGGCCGGCGTTACGCTTGGTCGACTGGAGCAG 655 consensus_9790#2 GGAGNCACAATGCACTTTGGAACCGCATTTACCACGGGGGAACATAAATTACCGGGGCAG 231 * ** ** ** * * * * * ** * * * ** ** **** consensus_9790#1 GGGCTG-GCGATGTTTCAGGCCATGCTTGATAGCCCGTGCCATGCCCAACACGTCCGATG 399 consensus_9790#3 GGGCTG-GCGATGTNTCAG-CCATGCTTGATAGCCCGTGC-ATGCCAAACACATCCGATG 305 consensus_9790#0 GGGCTG-GCGATGTTTCAG-CCATGCTTGATAGCCCGTGCCATGCCCAACAC-TCCGATG 712 consensus_9790#2 GGGCGAAGAAATGGTTCGG-NGCCGTCCTGCACGTTGGGCGANCTTTAACACAACAACAG 290 **** * *** ** * * * * ** * ***** * * consensus_9790#1 CAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCA-CGGGATCGGACCATCACTTGTTCCC 458 consensus_9790#3 CAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCAACGGGATCGGACCATC--CTGTCCC- 362 consensus_9790#0 CAGGTCGGTGTTGGCTGTACGGTGTACTGTCGCA-CGGGATCGGACCATC--CTGTCCC- 768 consensus_9790#2 GTTGTNCAAAAAAATCTCGGGGTCCGANGGTACCTGTCCAATTTATCGCGACTGAGGCNG 350 ** *** * * * * * * consensus_9790#1 GGC-CACTGTACCCGCGGATATGCAACA--CCANTGTTTTGNGGNGGCTAAGGCCGGTTT 515 consensus_9790#3 -GC-CACTGTACC-GCG-ATATGCA-CA--CCATG--TTTGCGGNCGCTAGGCGTG---- 409 consensus_9790#0 -GC-CACTGTACC-GCG-ATATGCA-CA--CCATG--TTTGCGGC-GCTAGGCGTTG--- 815 consensus_9790#2 GGTACACTTAATTGGGGCGCATTTAACAGACCCCNAATCCGGACGGGTTATCGGGNGAAC 410 * **** * * * ** * ** ** * * * ** consensus_9790#1 GTTGCACGAGGTTGGCAGGAAAACGTAAAGATTGAACGCCCTGTAACCGGGCTGGGGCGG 575 consensus_9790#3 --TGCACGAGGTGG--AGGAAAGT---AAGAT-GAACGCCGT---ACCGGGCT------- 451 consensus_9790#0 --TGCACGAGGTGG--AGGAAAGT---AAGAT-GAACGCCGC--TACCGGGCTG--GCCG 863 consensus_9790#2 TAT-TATGGNTTTGGCANGGGCACAGAAGCGAGNAAGGGTNC----TCTGGCAGGAACCA 465 * * * * * * * * ** * * *** consensus_9790#1 GCTGTGGTTCCNGGGTAATTGTGTACGAGTTTT--------------------------- 608 consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 GCTGTGGTCC---GGCGTATGTGTACGAGTTTATCGAAGCGCTGGCGGACGGTGGCGTTA 920 consensus_9790#2 GGGGAGTTCCACGCGCNAGTTTGTAC---------------------------------- 491 consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 AGCAGGGCATTCCGCGTGACATGGCGCTGCAGCTGGCCGCTCAGACGGTGATGGGTGCGG 980 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 CCAAGACGGTACTGGACACGGGTAAGCATCCCGCCGTACTGAAGGACGAGGTGTGCTCGC 1040 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 CCGGCGGTGCAACGATACACGGGGTACATGCGCTCGAGCAGGGTTCGATGCGCGGCACGG 1100 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 TGATGAATGCGGTCGAGAGTGCCACTAAGCGGGCTGCAGAGCTTTCTTAGAATGCTTTGT 1160 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------------------------------ consensus_9790#3 ------------------------------------------------------------ consensus_9790#0 TTGAGTATAACTCATACCATGCCATTGTTTTTTTTTCATATTCATCAATATAAAGACAAA 1220 consensus_9790#2 ------------------------------------------------------------ consensus_9790#1 ------------------------------------- consensus_9790#3 ------------------------------------- consensus_9790#0 TAAATCGATCCTTTTTTCTTGATATGGTTAAAAAAAA 1257 consensus_9790#2 ------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||