These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1250 fasta sequence [GTTGGTTTTATTATTTGCTAAA-TTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAGCTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGACATACACACA-CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT-GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA-GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATCGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAATTTCTGGTGCGACCGGTGCGCGAATGCGGCACAAAACTGTTTACATAATGTTTACAGCGA] [+] EMBL CNS09D9S [GTTGGTTTTATTATTTGCTAAA TTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAGCTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGAAATACACACA CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCC ] [+] EMBL CNS093HU [ TGGTTTTATTATTTGCTAAA TTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAGCTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTTTTTTTTTTTTAAGGGAGACATACACACA CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCA CTTGGTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCT ] [+] EMBL CNS09EZW [ TTTATTATTTGCTAAA TTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAGCTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTATTGCAATAACCATAATAA ] [+] EMBL CNS08O2J [ TATTTGCTAAATTTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAGCTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGACATACACACA CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAACTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGCCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGTTTTTCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCA CTTGGTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGG ] [-] EMBL CNS08O2I [ AAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGACATACACACA CACATACAAACAAAACACATGCTTAACAAAAAACCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGCCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGACGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATCGCATTAGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTT ] [-] EMBL CNS09D9R [ CCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGACATACACACA CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATCGCATTAGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAATTTCTGGTGCGACCGGTGCGCGAATGCGG ] [-] EMBL CNS093HT [ GTGCGCCAACAGTTAACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGACATACACACA CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATCGCATTAGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAATTTCTGGTGCGACCGGTGCGCGAATGCGGCACAAAACTGTTTACATAATGTTTACAGCGA] [-] EMBL BM609896 [ TCATTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTAAGGGAGACATACACACACCACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCAcgg ] [-] EMBL BX617342 [ ACATACACACA CACATACAAACAAAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCC ] [+] EMBL AGA284334 [ ttttttTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCT ] [-] EMBL BX616518 [ AACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCGCTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGAAGCTCCTTCTCGGGGATCGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCTTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGT ] [-] EMBL BX603973 [ CAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAATTCCATCACGAA GGCGCGCAACGATAGGCCCAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATTGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGAATGCATGTTTTA ] [-] EMBL BX612426 [ CAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTTTCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCGCGCCTCCGTGTGTATCCCCTTT ] [-] EMBL CNS09EZV [ TGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATCGCATTAGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAATTTCT GTGCGACCGGTGCcg ] [-] EMBL CNS08I4D [ CATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCGCCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAATTCCATCACGAAGGGCGCGCAACGATAGGCCCAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATTGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGAATGCATGTTTTAATCGGTACCGTCACCATTTTGCGTGCAATTGCGGGTGCGACCGGTGCGCGAATGCGGCACAAAACTGTTTA ] [-] EMBL CNS08P1P [ GCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCACTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAATTCCATCACGAA GGCGCGCAACGATAGGCCCAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGTCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATTGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGG ] [-] EMBL AGA285637 [ TTGGGCACTTTCAGTTCGGGGTTGAGAGGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTT GTAGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGAAGCTCCTTCTCGGGGATCGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCTTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTT ] [-] EMBL CNS090BQ [ CTCGTCCTTAAACTCCATCACGAA GGCGCGCAACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGCCGGG ] consensusID : consensus_9792#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 981 fasta sequence [CTGGTTTTTGTTGGTTTTATTATTTGCTAAATTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAACTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACTGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCATGTGTGTGTTTTTAAGGAAGACAT--ACACACACACATACAAACAGAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACTGCTTGCCAGCAGGTGCAGGTTAGACTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGAAGTCGGGCCAGAAACTGCACTTCGGCGGACTGGAGCCCCTTCTCGGGGATTGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAATTTCTG] [+] EMBL CNS08XUW [CTGGTTTTTGTTGGTTTTATTATTTGCTAAATTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAACTGCAGCCTAAAAACGCTCGTGGCACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACTGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCATGTGTGTTTTTTTAAGGAAGACAT ACACACACACATACAAACAGAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACTGCTTGCCAGCAGGTGCAGGTTAGACTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGAAGTCGGGCCAGAAACTGCACTTCGGCGGACTGGAGCCCCTTCTCGGGGATTGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCG ] [+] EMBL CNS08I4E [ TTGGTTTTATTATTTGCTAAATTTACACTAACAGCCATCAACAATTTCCTCTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAACTGCAGCCTAAAAACGCTCGTGGCACAAGAGCGGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCACAAGCACAAATCTCTAACCCTTCCCCCTTAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCATTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCGTGTGTGTGTTTTTAAGGAAGACATACACACACACACATACAAACAGAACACATGCTTAACAAGTGGCCGATTT ] [-] EMBL CNS08XUV [ AGCTGGATCGATCAAACCGAGCAAACT GCGATCGCCATCGTTGGGAAATGAATAAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTACTGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAACCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCCAACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGCATGTGTGTGTTTTTAAGGAAGACAT ACACACACACATACAAACAGAACACATGCTTAACAAGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACTGCTTGCCAGCAGGTGCAGGTTAGACTTTTCCGATTCATAATGTCCGTGTACACGATCCCATTCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTTGCCGGTTGCCGGTGGCATCGAAGCCCTGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCGTAAGATGTCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATTGCATTGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGTCGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGCTGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAATTTCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9792#0 ---------GTTGGTTTTATTATTTGCTAAATTTACACTAACAGCCATCAACAATTTCCT 51 consensus_9792#1 CTGGTTTTTGTTGGTTTTATTATTTGCTAAATTTACACTAACAGCCATCAACAATTTCCT 60 *************************************************** consensus_9792#0 CTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAGCTGCAGCCTAAAAACGCTCGTGG 111 consensus_9792#1 CTTACTGTAGTGTTTCTACTCATTTGGTTTAGCTTAACTGCAGCCTAAAAACGCTCGTGG 120 ************************************ *********************** consensus_9792#0 CACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAAT 171 consensus_9792#1 CACAAGAGCTGGATCGATCAAACCGAGCAAACTGGCGATCGCCATCGTTGGGAAATGAAT 180 ************************************************************ consensus_9792#0 AAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTA 231 consensus_9792#1 AAAGCGCAAAGACATTGACGCTACATCATTGGTTCATTGACAAATTGGTAGCCGTGGTTA 240 ************************************************************ consensus_9792#0 CCGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAA 291 consensus_9792#1 CTGTTTAGATAATCGTACATTCGTTACCAAACCATAAACCATGCTAACCATAAGCACAAA 300 * ********************************************************** consensus_9792#0 CCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCC 351 consensus_9792#1 CCTCTAACCCTTCCCCCTCAACCTCTGGGGCTTAATTCATGTTGCTTTGTTGTGTGCGCC 360 ************************************************************ consensus_9792#0 AACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGC 411 consensus_9792#1 AACAGTTCACTCGTTTCATACGTTAGTGCAATAACCATAATAAACAGCTAACCGGTGTGC 420 ************************************************************ consensus_9792#0 GTGTGTGTGTTTT-AAGGGAGACATACACACACACATACAAACAAAACACATGCTTAACA 470 consensus_9792#1 ATGTGTGTGTTTTTAAGGAAGACATACACACACACATACAAACAGAACACATGCTTAACA 480 ************ **** ************************* *************** consensus_9792#0 AGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACCG 530 consensus_9792#1 AGTGGCCGATTTATTTGCTGGCAAACGATAGCTGAATGCGCCCACTCTTAGCATTGACTG 540 ********************************************************** * consensus_9792#0 CTTGCCAGCAGGTGCAGGTTAGGCTTTTCCGATTCATAATGTCCGTGTACACGATCCCAT 590 consensus_9792#1 CTTGCCAGCAGGTGCAGGTTAGACTTTTCCGATTCATAATGTCCGTGTACACGATCCCAT 600 ********************** ************************************* consensus_9792#0 TCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTT 650 consensus_9792#1 TCAGATGGTCCATCTCGTGCTGGGCAATGCGGGCATTCCAGCCGCTCAGTCGCAGCTCTT 660 ************************************************************ consensus_9792#0 GCCGGTTGCCGGTGGCATCGAAGCCCTGCAGCAGTATCTCCCGGTACCGGGGCACGTCCG 710 consensus_9792#1 GCCGGTTGCCGGTGGCATCGAAGCCCTGC------------------------------- 689 ***************************** consensus_9792#0 CCCGATAGCCGCGCACACTTTCGCACGCCTCCGTGTGTATCACCTTTTCGTAGTTGAGCA 770 consensus_9792#1 ------------------------------------------------------------ consensus_9792#0 CTTTCAGTTCGGGGTTGAGAAGAATCGTCAATGGCAATGGTTCCATCTCGCGCAGCTTGT 830 consensus_9792#1 ------------------------------------------------------------ consensus_9792#0 AGTCCGCCTTGGTGTACTGGTCCCGCAGCTCGTCCTTAAACTCCATCACGAAGGCGCGCA 890 consensus_9792#1 ------------------------------------------------------------ consensus_9792#0 ACGATAGGCCAAGCTGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCG 950 consensus_9792#1 --------------TGTGGGGCGGCCAATCCGACGCACCGGTACGCTCGCATCACTTTCG 735 ********************************************** consensus_9792#0 TAAGATGCCGGGCCAGATACTGCACTTCGGCGGACTGGAGCTCCTTCTCGGGGATCGCAT 1010 consensus_9792#1 TAAGAAGTCGGGCCAGAAACTGCACTTCGGCGGACTGGAGCCCCTTCTCGGGGATTGCAT 795 ***** * ********* *********************** ************* **** consensus_9792#0 TGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGT 1070 consensus_9792#1 TGGCCGGCACGCGTAGTACGGGATCGCCTAGCTGCACGATGTGATCGTACGGTGGTTCGT 855 ************************************************************ consensus_9792#0 CGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGC 1130 consensus_9792#1 CGTTGCCTTTCGGTTGCCACAAACTTCGATACCACTTGGCAAACGATTTGTCCATCCGGC 915 ************************************************************ consensus_9792#0 TGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAA 1190 consensus_9792#1 TGGTGGTGCTGAGTGTTCGGATGCATGTTTTAATCGGGACCGTTACCATTTTGCGTGCAA 975 ************************************************************ consensus_9792#0 TTTCTGGTGCGACCGGTGCGCGAATGCGGCACAAAACTGTTTACATAATGTTTACAGCGA 1250 consensus_9792#1 TTTCTG------------------------------------------------------ 981 ****** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||