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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9820#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1447 fasta sequence
[TATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC-GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAACGTTAGCGCAGG-GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT-CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAG-TTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTT-CCCATCAGACTCCAAAACTGTGTCCAAA-TTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGTTAGCCTCGCTCA------TGTTTGACTTATGCAAGGATTCTACAA-TGCA-TGCACAAAAATAAATGGTTACTTTTAAACAAAA]
[+] EMBL CNS08GNV [TATCGGTGCACAGAATTAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTAAATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTG AACCATGCGACA CTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA CGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGTAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCAC GTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGC ]
[+] EMBL CNS08GMT [ GTGCA ACGATTAGCAGCAAATATATATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTGAAA CATGCGACA CTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA CGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACAGAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGTAACGTTAGCGCAGGCGGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTA CCGGCAC GTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAG ]
[+] EMBL BM616426 [ ccgCGATTTGCAGCAAATATAAATGCAGCTGGTGAATTATTAACAACCACCGACGTGCG TCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACAAAAACAGCGAGGGGGTGAAACCATGCGACAGCTCGTCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCACTTGCTCAGACCGCAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCA ]
[+] EMBL BX607710 [ TAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGTAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGC ]
[+] EMBL BX605332 [ ATTATTAACAACCACCGACGTGCG TCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACAAAAACAGCGAGGGGGTGAAACCATGCGACAGCTCGTCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCACTTGCTCAGACCGCAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCG ]
[+] EMBL BM642495 [ CCG GGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAGCGTTAACGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAAACAGTTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCACGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTCGAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAGAGCATCGGTGCCAAGGCGGACAAGCATCTGGTGGACAACGAAACGGACCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGGCACACGAACGGTTGCATGACGT ]
[+] EMBL CNS098QM [ TCAACAACCTGTTCACTTGCTCAGACCGCAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGTTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTAAAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTGCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTT ]
[+] EMBL BX615291 [ TTGCTCAGACCGCAACGTTAGCGCATG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATCCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAG ]
[+] EMBL CNS08S46 [ CAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGTTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCAGAATACTCACATGCACGCAGAACATGTCACCGGAACCGGTTTCCT ]
[+] EMBL BX618117 [ AGCCCTTCACGGAAGAATTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCGGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTTATCAAG ]
[-] EMBL CNS08GMU [ CAATCCCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAACTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTCGCCTGCGAAAAGCCGGAAGTATTTACGTTGTTGGACGTCACAGGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAGTTTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTTCCCCATCAGACTCCAAAACTGTGTCCAAA TTGGAATTTCACCTGCAAAAGAGCTGTAGTTGGGTTAGCCTCATTCACGTTTTTTTTTTAATTATACAAGGATTtttgat tag ]
[+] EMBL AGA281992 [ TTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTATTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAAGGCATTGCGTTTACTGGCG ]
[-] EMBL CNS08GNW [ GACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAACTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTCGCCTGCGAAAAGCCGGAAGTATTTACGTTGTTGGACGTCACAGGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAGTTTTTTTTCTTTCTTTTTGGGATCATCTTGGGTTTTCCCCATCAGACTCCAAAACTGTGTCCAAA TTGGAATTTCACTTGCAAAAGAGCTGTAGTTGGGTTAGCCTCATTCACGTTTTTTTTTTAATTATACAAGGATTTT TGCA T TACAAAAATAAATGGTT ]
[+] EMBL BX610813 [ TGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGTTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACA ]
[-] EMBL CNS098QN [ CGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCTTCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGTTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAATCGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAATAG CTTTTTTCTTTCCTTTTGGGATCTTCTTGGGGTTT TCCATCAGACTCCAAAACTGTGTCCAAATTTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGG TATCGTCGCTCA TGTTTGACTTATGCAA GATTCTACAA TGCA TGCAa ]
[+] EMBL BX618765 [ cgGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGGGCCAAGGCGGACAATTATCTAGGGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGC ]
[+] EMBL BX610814 [ ACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGGGCCAAGGCGGACAAGCATCTAGGGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGAAGTCCACGCCCGGCCACACGAACGGGTGCATGACGTCCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGAAACGC ]
[+] EMBL BX615479 [ AGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGTCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAATCGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAG CTTTTTTCTTTCCTTTTGGGATCTTCTTGGGGTTT TCCATCAGACTCCAAAACTGTGTCCAAATTTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGTTAGCTTCGCTCA TGTTTGACTTATGCAAGGATTCTACA ]
[-] EMBL AGA280296 [ TGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAATCGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAG CTTTTTTCTTTCCTTTTGGGATCTTCTTGGGGTTT TCCATCAGACTCCAAAACTGTGTCCAAATTTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGTTAGCTTCGCTCA TGTTTGACTTATGCAAGGATTCTACAATTGCATTGCA AAAATAAAACGGTTACTTTTAAACAAAA]
[-] EMBL CNS090E3 [ GAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAGTTTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTTCCCCATCAGACTCCAAAACTGTGTCCAAA TTGGAATTTCAC ]
consensusID : consensus_9820#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[CCGCGCTATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGTGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGACTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACCAAAACAGCGAAGGGGCGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGACAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTGCGTACGATTGCTAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCGTTCACGGAAGATTTCTTCTTCAGACAGGTGAGCTCGTATATTTACGTATATTTATCATCGTCGTCACTGGAATCGGCAGCTTTCTTCGGACGAACAACTAATGTAGGAAGACAAAATAGGAGTGCATTGGGTCTGACAAGAGTCATTACATTCGTGGTGGGGGTCATCATGAAGAGCATAGCATGGTTTCGTTTTGTATGTATTGATGCTGTAATATGATTTCCGCTGTGTCATGTTAGGAGCAAGCTTGGCCAAATTAATTTCCTG]
[+] EMBL BM623481 [CCGCGCTATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGTGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGACTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACCAAAACAGCGAAGGGGCGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGACAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTGCGTACGATTGCTAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCGTTCACGGAAGATTTCTTCTTCAGACAGGTGAGCTCGTATATTTACGTATATTTATCATCGTCGTCACTGGAATCGGCAGCTTTCTTCGGACGAACAACTAATGTAGGAAGACAAAATAGGAGTGCATTGGGTCTGACAAGAGTCATTACATTCGTGGTGGGGGTCATCATGAAGAGCATAGCATGGTTTCGTTTTGTATGTATTGATGCTGTAATATGATTTCCGCTGTGTCATGTTAGGAGCAAGCTTGGCCAAATTAATTTCCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9820#0 ------TATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGA 54
consensus_9820#1 CCGCGCTATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGTGAATTATTAAGA 60
***************************************** ************
consensus_9820#0 ACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGC 114
consensus_9820#1 ACCACCGACGTGCGATCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGACTCGC 120
***************************** ****** ***************** *****
consensus_9820#0 AAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGA 174
consensus_9820#1 AAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACCAAAACAGCGA 180
************************** ********************** ***** ****
consensus_9820#0 GGGGGTGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA 234
consensus_9820#1 AGGGGCGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA 240
**** ******************************************************
consensus_9820#0 GCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTG 294
consensus_9820#1 GCGACAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTG 300
*** ********************************************************
consensus_9820#0 CGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCT 354
consensus_9820#1 CGTACGATTGCTAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCT 360
*********** ************************************************
consensus_9820#0 CAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAA 414
consensus_9820#1 CAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCGTTCACGGAA 420
************************************************** *********
consensus_9820#0 GATTTCTTCTTCAGACAGCTGTTCGATGAGCAATCCCACACCTATTCGTACCTGTTGGCA 474
consensus_9820#1 GATTTCTTCTTCAGACAG-------GTGAGC--TCGTATATTTACGTATATTTATCATC- 470
****************** ***** ** * * ** ** * * *
consensus_9820#0 GACATCACGACGAA-GGAAGCCATCCT-GATCGATCCCGTACTAGAGCAGGCGAAACGTG 532
consensus_9820#1 GTCGTCACTGGAATCGGCAGCTTTCTTCGGACGAACAACTAATGTAGGAAGACAAAATAG 530
* * **** * ** *** ** * * *** * ** * ** * * *** *
consensus_9820#0 ATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGC 592
consensus_9820#1 GAGTGCATTGGGTCTGACAA----GAGTCA---TTACATTCGTGGTGGGGGTCATCATGA 583
* ** * ** * ** * * * * ** * ** ****
consensus_9820#0 ACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCG 652
consensus_9820#1 A----GAGCATAGCAT-GGTTTCGTTTTGTATGTATTGATGCTGT--AATATGATTTCCG 636
* ** *** ** ** ** *** * **** * * * **
consensus_9820#0 TCATCTCGCAA-AGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTC 711
consensus_9820#1 CTGTGTCATGTTAGGAGCAA-GCTTGGCCAAATTAATTTCCTG----------------- 678
* ** ** *** ** * * * * ** *
consensus_9820#0 CAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATG 771
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 ACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGCTGATTCGAGGT 831
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 TGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAG 891
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 CGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAAC 951
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 ATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAA 1011
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 GCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCT 1071
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 GTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTG 1131
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 ATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTA 1191
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 TTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATA 1251
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 TTTTGTGTGTATGATGTAGTAGTTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTTCCC 1311
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 ATCAGACTCCAAAACTGTGTCCAAATTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGT 1371
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 TAGCCTCGCTCATGTTTGACTTATGCAAGGATTCTACAATGCATGCACAAAAATAAATGG 1431
consensus_9820#1 ------------------------------------------------------------
consensus_9820#0 TTACTTTTAAACAAAA 1447
consensus_9820#1 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||