These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9823#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2073 fasta sequence [CCGCTGTGTGTGTGTTTTTCTGTTTTGTGCAAAACCGCATCCAAAATCGATCGACCGCTCGCCATCGTGTGTGCCATCGAAAACAAATCGCGTTGAATTTTGTGTGCATTTCTCCCTCCCCCGAGGTTGCAAAAGTGCAAGACAACTGCATTCAGCGTGTAACGATCCCGATCTATCCTGTGTCAATTGTGTGTGTGTGTCTCTCTCTCTCTCTCTGTGTATGCCCACACTAATCAAGCCCTCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATCCCGCGGAGAGGAATGCTGGTAGTGTGGTGCGCTGAAAATTGATAAAATTAAGCTGACTAACGGGAAACCTGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTGAGTGGCTGCAATTTACATAAGTCTCAGGCAAACCGGGGAATCCAAAGTCCGATCCCGACAACGCACCGAAAGAGAACAGAACTAAACCTCCTCAAAAAAATGACAAAATACTATGAAAGTGAAACCGTGTACAACTACTCCTGGGAGCAGGTCACACAGGGGCTTCTGGAACCGATACCCGAACCCGTTCAGCTCGCACGTACTCTCCGAGGACACGGTCAGCCGGGAGGTGCGGAATGGGAAGCTGCACAGCAAGCGGCTCCTCACCAAGACGAACCACGTGCCGAAGTGGGGCGAGCGCTTCTTCAAGGCAAAGTCGGTCAACATCGTGGAGGAGTCGGTGGTCGATCCGAACGAGCGAACGCTCGTCACGTACACGCGTAACATTGGCTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATCGCTCCCGGACCAGCCGGGCAAAACCATCGCCATCCGGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGGTCGCGCTGGCAGCGGCCGCCGCCGCTGCCGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTAGGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC-AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCAGAAAGAGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTTTCAAAAGTAGTTATTCCCATCTTGGATCCGCAGACGTAAAGCCGACGCAAAGAAGGTCGTGTTCCACATCTCAGCAGTATTGTCATGCGTGTGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGAGCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCTCCCGGGAGGAAAGCAAACGAGAGACAGGGTAGATTATACATTTGGAATAGCGCGAATAGGACGTAAACTAGAATATTCAATTGTACGCTACTTTAAACATAACTGGAATAAATCCATCC] [+] EMBL BM607157 [CCGCTGTGTGTGTGTTTTTCTGTTTTGTGCAAAACCGCATCCAAAATCGATCGACCGCTCGCCATCGTGTGTGCCATCGAAAACAAATCGCGTTGAATTTTGTGTGCATTTCTCCCTCCCCCGAGGTTGCAAAAGTGCAAGACAACTGCATTCAGCGTGTAACGATCCCGATCTATCCTGTGTCAATTGTGTGTGTGTGTCTCTCTCTCTCTCTCTGTGTATGCCCACACTAATCAAGCCCTCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATCCCGCGGAGAGGAATGCTGGTAGTGTGGTGCGCTGAAAATTGATAAAATTAAGCTGACTAACGGGAAACCTGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTGAGTGGCTGCAATTTACATAAGTCTCAGGCAAACCGGGGAATCCAAAGTCCGATCCCGACAACGCACCGAAAGAGAACAGAACTAAACCTCCTCAAAAAAATGACAAAATACTATGAAAGTGAAACCGTGTACAACTACTCCTGGGAGCAGGTCACACAGGGGCTTCTGGA ] [+] EMBL AGA284923 [ AATCGATCGACCGCTCGCCATCGTGTGTGCCATCGAAAACAAATCGCGTTGAATTTTGTGTGCATTTCTCCCTCCCCCGAGGTTGCAAAAGTGCAAGACAACTGCATTCAGCGTGTAACGATCCCGATCTATCCTGTGTCAATTGTGTGTGTGTGTCTCTCTCTCTCTCTCTGTGTATGCCCACACTAATCAAGCCCTCGCATCGTTGCTATCGA ] [+] EMBL BX626819 [ GCATTTCTCCCTCCCCCGAGGTTGCAAAAGTGCAAGACAACTGCATTCAGCGTGTAACGATCCCGATCTATCCTGTGTCAATTGTGTGTGTGTGTCTCTCTCTCTCTCTCTGTGTATGCCCACACTAATCAAGCCCTCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATCCCGCGGAGAGGAATGCTGGTAGTGTGGTGCGCTGAAAATTGATAAAATTAAGCTGACTAACGGGAAACCTGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTGAGTGGCTGCAATTTACATAAGTCTCAGGCAAACCGGGGAATCCAAAGTCCGATCCCGACAACGCACCGAAAGAGAACAGAACTAAACCTCCTCAAAAAAATGACAAAATACTATGAAAGTGAAACCGTGTACAACTACTCCTGGGAGCAGGTCACACA GGGCTTCTGGAACCGATACCCGAACCCGTTCAGCTCGCACGTACTCTCCGAGGACACGGTCAGCCGGGAGGTGCGGAATGGGAAGCTGCACAGCAAGCGGCTCCTCACCAAGACGAACCACGTGCCGAAGTGGGGCGAGCGCTTCTTCAAGGCAAAGTCGGTCAACATCGTGGANGAGTCGGTGGTCGATCCGAACGAGCGAACGCTCGTCACGTACACGCGTAACATTGGCTTCAACAAAATAATGAGTGTGGTGGAAAANGNGGTCTACAAATCGCTCCCGGACCAGCCGGGC ] [-] EMBL AGA280991 [ ACGTACTCTCCGAGGACACGGTCAGCCGGGAGGTGCGGAATGGGAAGCTGCATAGCAAGCGGCTCCTCACCAAGACGAACCACGTGCCGAAGTGGGGCGAGCGCTTCTTCAAAGCAAAGTCGGTCAACATCGTGGAGGAGTCGGTGGTCGATCCGAACGAGCGAACGCTCGTCACGTACACGCGTAACATTGGTTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATCGCTCCGGGACCAGCCGGGCAAAACCATCGCCATCCGGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGGTC ] [-] EMBL AGA283633 [ GCGCTTCTTCAAGGCAAAGTCGGTCAACATCGTGGAGGAGTCGGTGGTCGATCCGAACGAGCGAACGCTCGTCACGTACACGCGTAACATTGGCTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATCGCTCCCGGACCAGCCGGGCAAAACCATCGCCATCCGGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGGTC ] [+] EMBL BX601994 [ ATCGTGGAGGAGTCGGTGGTCGATCCGAACGAGCGAACGCTCGTCACGTACACGCGTAACATTGGTTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATCGCTCCCGGACCAGCCGGGCAAAACCATCGCCATCCGGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGGTCGCGCTGGCAGCGGCCGCCGCCGCTGCCGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCGTCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTAGGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGTTTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCCAAAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAG ] [+] EMBL AGA283784 [ CGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTAGGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCAGAAAGAGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTTTCAAAAGTAGTTATTCCCATCTTGGATCCGCAGACGTAAAGCCGACGCAAAGAAGGTCGTGTTCCACATCTCAGCAGTATTGTCATGCGTGTGTGG ] [+] EMBL AGA283967 [ CGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTANGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCATAAAGAGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTTTCAAA ] [+] EMBL AGA284118 [ CGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTAGGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCAGAAAGAGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTTTC ] [+] EMBL AGA283617 [ CGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTATGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCAGAAAGAGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTT ] [+] EMBL AGA283565 [ CGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTAGGAAGGAGGGGACACACACGGGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGTTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCA ] [+] EMBL BX617102 [ TTGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTGTTACCC AAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCAGAAAGAGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTTTCAAAAGTAGTTATTCCCATCTTGGATCCGCAGACGTAAAGCCGACGCAAAGAAGGTCGTGTTCCACATCTCAGCAGTATTGTCATGCGTGTGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCGATGATCGAGCGGAGGAGGCGACAGCAG ] [+] EMBL BX611947 [ GTTTCAAAAGTACTTTTTCCCATCTTGGATCCGCAGACGTAAAGCCGACGCAAAGAAGGTCGTGTTCCACATCTCAGCAGTATTGTCATGCGTGTGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGAGCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCTCCCGGGAGGAAAGCAAACGAGAGACAGGGTAGATTATACATTTGGAATAGCGCGAATAGGACGTAAACTAGAATATTCAATTGTACGCTACTTTAAACATAACTGGAATAAATCCATCC] [-] EMBL AGA285263 [ TGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGAGCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCT ] [-] EMBL AGA285415 [ ATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATCCCACTTGATTGTGTGCGCATTGTGTGCNCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGAGCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCT ] [-] EMBL AGA285075 [ GCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGAGCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCT ] [-] EMBL AGA284854 [ AATTTCCAAAGGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAATCGAATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTGCTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGATAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGAGCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCTCCCGGGAGGAAAGCAAACGAGAGACAGGGTAGATTATACATTTGGAATAGC ] consensusID : consensus_9823#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 515 fasta sequence [CATCGTGTGTGCCATCGAAAACAAATCGCGTTGTAATTTGTGTGCATTTCTCCCTCCCCCGAGGCGGCAAAAGTGCAAGACAACTGCATTCAGCGTGCAACGATCCCGATCTGTCCTGTGTGAATTGTGTGTGTGTCTCTCTCTGTGTATGCCCACACTAATCAAGCCCCCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATCCCGCGAAGAGGAATGTTGGTAGTGTGGTGCGCTGAAAATTGATAAAATTAAGCTGACTAACGGCAAACCCGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTGAGTGGCTGCAATTTACATAAGTCTCAGGCAAACCGGGAAATCCAAAGTCCGATCCCGACAACGCACCGAAAGAGAACAGAACTAAACCTCCTCAAAAAAATGACAAAATACTATGAAAGTGAAACCGTCTACAACTACTCCTGGGAGCAGGTCACACAGGGCTTCTGGAACCGATACC] [+] EMBL BX605642 [CATCGTGTGTGCCATCGAAAACAAATCGCGTTGTAATTTGTGTGCATTTCTCCCTCCCCCGAGGCGGCAAAAGTGCAAGACAACTGCATTCAGCGTGCAACGATCCCGATCTGTCCTGTGTGAATTGTGTGTGTGTCTCTCTCTGTGTATGCCCACACTAATCAAGCCCCCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATCCCGCGAAGAGGAATGTTGGTAGTGTGGTGCGCTGAAAATTGATAAAATTAAGCTGACTAACGGCAAACCCGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTGAGTGGCTGCAATTTACATAAGTCTCAGGCAAACCGGGAAATCCAAAGTCCGATCCCGACAACGCACCGAAAGAGAACAGAACTAAACCTCCTCAAAAAAATGACAAAATACTATGAAAGTGAAACCGTCTACAACTACTCCTGGGAGCAGGTC ] [+] EMBL AGA282621 [ AAAAGTGCAAGACAACTGCATTCAGCGTGCAACGATCCCGATCTGTCCTGTGTGAATTGTGTGTGTGTCTCTCTCTGTGTATGCCCACACTAATCACGCCCCCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATCCCGCGGAGAGGAATGCTGGTAGTGTGGTGCGCTGAAAATTGATAAAATTAAGCAGACTAACGGCAAACCCGACATCGCAATCAATTTGAAAAGTGAAAACGAGCTCGCTTGAGTGGTTGCAATTTACATAAGTCTCAGGCAAACCGGGGAATCCAAAGTCCGATCCCGACAACGCACCGAAAGAGAACAGAACTAACCCTCCTCAAAAAAATGACAAAATACTATGAAAGTGAAACCGTGTACAACTACTCCTGGGAGCAGGTCACACAGGGCTTCTGGAACCGATACC] consensusID : consensus_9823#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 398 fasta sequence [CAGATCGCAGAGGTNTANCGAACGCTCGTCACGTACACGCGTAACATTGGCTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATCGCTCCCGGACCAGCCGGGCAAAACCATCGCCATCCGGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGGTCGCGCTGGCAGCGGCCGCGCCGCTGCCGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACCATTTGGTACAGAACCTGTC] [+] EMBL AL696905 [CAGATCGCAGAGGTNTANCGAACGCTCGTCACGTACACGCGTAACATTGGCTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATCGCTCCCGGACCAGCCGGGCAAAACCATCGCCATCCGGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGGTCGCGCTGGCAGCGGCCGCGCCGCTGCCGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACCATTTGGTACAGAACCTGTC] consensusID : consensus_9823#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence [CAGTATTGTCATGCGTGTGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCTCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAAAAAAGTGATCTCAGGCGAAAACTTAACATCAAATAAA] [-] EMBL AGA284907 [CAGTATTGTCATGCGTGTGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCACAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCGTCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATTGTGTGCGCATTGTGTGCTCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGATCACTTCTTTCTGCGCCTGAGAAAAAAGTGATCTCAGGCGAAAACTTAACATCAAATAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CCGCTGTGTGTGTGTTTTTCTGTTTTGTGCAAAACCGCATCCAAAATCGATCGACCGCTC 60 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 --CATCGTGTGTGCCATCGAAAACAAATCGCGTTGTAATTTGTGTGCATTTCTCCCTCCC 58 consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GCCATCGTGTGTGCCATCGAAAACAAATCGCGTTGAATTTTGTGTGCATTTCTCCCTCCC 120 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 CCGAGGCGGCAAAAGTGCAAGACAACTGCATTCAGCGTGCAACGATCCCGATCTGTCCTG 118 consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CCGAGGTTGCAAAAGTGCAAGACAACTGCATTCAGCGTGTAACGATCCCGATCTATCCTG 180 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 TGTGAATTGTGTGTGTGT----------CTCTCTCTGTGTATGCCCACACTAATCAAG-- 166 consensus_9823#3 ---------------------------------------------CAGTATTGTCATG-- 13 consensus_9823#0 TGTCAATTGTGTGTGTGTGTCTCTCTCTCTCTCTCTGTGTATGCCCACACTAATCAAG-- 238 consensus_9823#2 -------------------------CAGATCGCAGAGGTNTANCGAACGCTCGTCACGTA 35 * * *** * consensus_9823#1 CCCCCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATC 226 consensus_9823#3 CGTGTGTGGCCTTGTT---GGAAAGC-ATGCCCCATGACCCCCCGGTATACCACAAAGTC 69 consensus_9823#0 CCCTCGCATCGTTGCTATCGAAAAGTGATAAGGCAAGGTGTGTGTGTGCACCAGCCAATC 298 consensus_9823#2 CACGCGTAACATTGGCTTCAACAAAATAATGAGTGTGGTGGAAAAGGTGGTCTACAAATC 95 * * * *** ** * * * * * ** consensus_9823#1 CCGCGAAGAGGAATGTTGGTAGTGTGGTGCGCTGAAAATTGATA-AAATTA--AGCTGAC 283 consensus_9823#3 CCATGAAAAAAAGCCACAAAACC----TACACAAAATGCCGGCA-GGGCCGCCGCCCGTC 124 consensus_9823#0 CCGCGGAGAGGAATGCTGGTAGTGTGGTGCGCTGAAAATTGATA-AAATTA--AGCTGAC 355 consensus_9823#2 GCTCCCGGACCAGCCGGGCAAAACCATCGC-CATCCGGTCGGCGTGGATCG--ATTCGTC 152 * * * * * * * * * consensus_9823#1 TAACG-GCAAACCCGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTG--AGT 340 consensus_9823#3 CAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTG--ATT 182 consensus_9823#0 TAACG-GGAAACCTGACATCGCAATCAATTTGAAAAGTGAAACCGAGCTCGCTTG--AGT 412 consensus_9823#2 CG-TGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGCTGGAGCGGTTCAAGAAGAATT 211 * ** ** * * * consensus_9823#1 GGCTGCAATTTACATAAGTCT-CAGGCAAACCGGGAAATCCAAAGTCCGATCCCGACAA- 398 consensus_9823#3 GTGTGCGCATTGTGTG---CT-CAGGGAAGAACGGCACTCGATGATCTCATTT------- 231 consensus_9823#0 GGCTGCAATTTACATAAGTCT-CAGGCAAACCGGGGAATCCAAAGTCCGATCCCGACAA- 470 consensus_9823#2 GCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGCACATGTTCCCGAACAATCCGG 271 * ** ** * * * * ** consensus_9823#1 -CGCACCGAAAGAGAACAGAACTAAACCTCC--TCAAA-----AAAATGACAAAATACTA 450 consensus_9823#3 --GCGCCT---GAGATCACTTCTTTCTGCGC--CTGAG-----AAAAAAGTGATCTCAGG 279 consensus_9823#0 -CGCACCGAAAGAGAACAGAACTAAACCTCC--TCAAA-----AAAATGACAAAATACTA 522 consensus_9823#2 TCGCGCTGGCAGCGGCCGCGCCGCTGCCGCCAGCCAGGCCTCCAAGGCCCAGAAGCTGCG 331 ** * * * * * * ** * consensus_9823#1 TGAAA--GTGAAACC-GTCTACAACTACTCCTGGGAGCAGGTCACACAGGG-CTTCTGGA 506 consensus_9823#3 CGAAA--ACTTAACA-TCAAATAAA----------------------------------- 301 consensus_9823#0 TGAAA--GTGAAACC-GTGTACAACTACTCCTGGGAGCAGGTCACACAGGGGCTTCTGGA 579 consensus_9823#2 CGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGCAGGCAGAACCATTTGGTACAGA 391 *** *** * consensus_9823#1 ACCGATACC--------------------------------------------------- 515 consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 ACCGATACCCGAACCCGTTCAGCTCGCACGTACTCTCCGAGGACACGGTCAGCCGGGAGG 639 consensus_9823#2 ACCTGTC----------------------------------------------------- 398 consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TGCGGAATGGGAAGCTGCACAGCAAGCGGCTCCTCACCAAGACGAACCACGTGCCGAAGT 699 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GGGGCGAGCGCTTCTTCAAGGCAAAGTCGGTCAACATCGTGGAGGAGTCGGTGGTCGATC 759 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CGAACGAGCGAACGCTCGTCACGTACACGCGTAACATTGGCTTCAACAAAATAATGAGTG 819 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TGGTGGAAAAGGTGGTCTACAAATCGCTCCCGGACCAGCCGGGCAAAACCATCGCCATCC 879 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GGTCGGCGTGGATCGATTCGTCCGTGTACGGCTTCGGTACCGCCATTCGCGCGTTCGGGC 939 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TGGAGCGGTTCAAGAAGAATTGCGCCAAAACGGTGAGCGGCTTCAACTACGTCCTGCAGC 999 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 ACATGTTCCCGAACAATCCGGTCGCGCTGGCAGCGGCCGCCGCCGCTGCCGCCAGCCAGG 1059 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CCTCCAAGGCCCAGAAGCTGCGCGAAGCGGCCAAACACGCATCGGACCACATGAAGGCGC 1119 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 AGGCAGAACATTTGGTACAGAACCTGTCCGTCAAGGGCTAGGAAGGAGGGGACACACACG 1179 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GGGGGAGGATACCATGCATCAATTCCAACGGTAACGGAGCAGTCCCCCAGGTACACAAGT 1239 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TGATGCCGTAGGTTTGATTTTAAGTCTTTGGTGTGGGGTTTTGTTCGGTACCGGGTTTTG 1299 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TTACCCAAAAAAAGAGCTGTGGTTAGTACGTTAGAGAGAGAGGAAGAGAGAAGCAGAAAG 1359 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 AGAGCGAGAGATAGGAAATAGGAAAAGTTTTTAAAACAGCCGTTTCAAAAGTAGTTATTC 1419 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CCATCTTGGATCCGCAGACGTAAAGCCGACGCAAAGAAGGTCGTGTTCCACATCTCAGCA 1479 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GTATTGTCATGCGTGTGTGGCCTTGTTGGAAAGCATGCCCCATGACCCCCCGGTATACCA 1539 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CAAAGTCCCATGAAAAAAAGCCACAAAACCTACACAAAATGCCGGCAGGGCCGCCGCCCG 1599 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TCCAAAGAGCCCGTTGAATTGTGCAATTTCCAAACGATTGGTTAATCATTCCACGTGATT 1659 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GTGTGCGCATTGTGTGCCCAGGGAAGAACGGCACTCGATGATCTCATTTGCGCCTGAGAT 1719 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CACTTCTTTCTGCGCCTGAGAATCGGATCGCACGAAGTAGGTTGCTTGCTGCTGTTACTG 1779 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 CTGCTTCTGCTGCCGCTAAGCTGCTACTACTAGCAACCAGAACAAAAAACAGACGTTTGA 1839 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 TAGTCTTTATTGTTAATCCATTAGTCTCTACTGTTCAAAAACCGAAGGGGCAATGATCGA 1899 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GCGGAGGAGGCGACAGCAGTTGTGCGCGAAAGATGGTAATACTGGGTTGAATTCTCCCGG 1959 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------------ consensus_9823#3 ------------------------------------------------------------ consensus_9823#0 GAGGAAAGCAAACGAGAGACAGGGTAGATTATACATTTGGAATAGCGCGAATAGGACGTA 2019 consensus_9823#2 ------------------------------------------------------------ consensus_9823#1 ------------------------------------------------------ consensus_9823#3 ------------------------------------------------------ consensus_9823#0 AACTAGAATATTCAATTGTACGCTACTTTAAACATAACTGGAATAAATCCATCC 2073 consensus_9823#2 ------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||