These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9825#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 993 fasta sequence [CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAAAGGCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATTAATTCTGTACTTAAAATCGAACATCCTTTTTGGCAAGCCATTTGTGGC] [+] EMBL BM578402 [CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAA ] [+] EMBL BM615467 [ ccgATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGC ] [+] EMBL BX610136 [ CAATTTTATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTT ] [+] EMBL BX624121 [ ATTTTATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTT ] [+] EMBL BX629022 [ CATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCT ] [+] EMBL BM584181 [ cCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACT ] [+] EMBL BX621793 [ tATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATTAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTANCACCTAACGCNCAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGNGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAANAGCTACGAGGGGATTGGCGAANCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGANTTGTTTGTTGGGGCTCGCAACATGGCANGTGCTATATTTGAGACGCTACTTTATCGCGANGAAATTAATTTAAACATGTATGCAGNTGGACTGTCTTACATCTTGATGTGGCTGCNTTAA ] [+] EMBL BM634929 [ ccgATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATC ] [+] EMBL BX624793 [ GTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAAAGG ] [+] EMBL BM642312 [ ccgCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAGAGGCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATTAATTCTGTACTTAAAATCGAACATCCTTTTTGGCAAGCCATTTGTGGC] consensusID : consensus_9825#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 707 fasta sequence [CCCACGCGTCCGGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT-AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC] [+] EMBL BM612383 [CCCACGCGTCCGGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC] [+] EMBL AL694349 [ ccgaggtnTTGTGGTGCGTTACGTAGAACCGTTAT AACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGG ACTGGATGTAAAGAAAGGGATTGAAACTAAAGAGCTACGAGGGGATTGG GAAGCAG AAAAT ] [+] EMBL AL932117 [ ccgaggtaGTAGAA CGTTATAAACTACAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGAT ] [+] EMBL BX619029 [ GTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCAACAAACGAACGCGATTATGTTCCGACTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAAT ] [-] EMBL CNS093J2 [ TGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTC ] [+] EMBL BX617128 [ CATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATCAAAACGGC ] consensusID : consensus_9825#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 663 fasta sequence [CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCGCGACACT] [+] EMBL BM635809 [CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCGCGACACT] [+] EMBL CNS093J1 [ AAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTACTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAG AGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTA ] [+] EMBL BM650817 [ GCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGga ] consensusID : consensus_9825#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 346 fasta sequence [GCAGAATCGCCACGAGGNGATATTTTTGCCTTACACAATTTCATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCGACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGATACC] [+] EMBL BX469095 [GCAGAATCGCCACGAGGNGATATTTTTGCCTTACACAATTTCATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCGACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGATACC] consensusID : consensus_9825#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 87 fasta sequence [CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGATTTTATCATTGGTTTGCCTCTATGGTGTATGTACTTTGT] [+] EMBL BM630431 [CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGATTTTATCATTGGTTTGCCTCTATGGTGTATGTACTTTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9825#1 ---------------------------------------------CC-CACGCGTCCG-- 12 consensus_9825#3 --------------GCAGAATCGCCACGAGGNGATATTTTTGCCTTA-CACAATTTCATC 45 consensus_9825#2 CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATC 60 consensus_9825#0 ----------CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATC 50 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 ---GTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTA 69 consensus_9825#3 ATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTA 105 consensus_9825#2 ATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTA 120 consensus_9825#0 ATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTA 110 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 GAGTGTAACTTTCGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 127 consensus_9825#3 GAGTGTAACTTTCGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 163 consensus_9825#2 GAGTGTAACTTTTGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 178 consensus_9825#0 GAGTGTAACTTTTGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 168 consensus_9825#4 -----------CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGAT 49 * * ** ** * ** ** *** ** * ** * * * ** consensus_9825#1 ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 187 consensus_9825#3 ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 223 consensus_9825#2 ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 238 consensus_9825#0 ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 228 consensus_9825#4 TTTATCATTGGTTTGCCTCTATGGTGTATGTACTTTGT---------------------- 87 *** ***** ** * ** * * * consensus_9825#1 GCTAGCACCTAACGC-ACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 246 consensus_9825#3 GCTAGCACCTAACGCGACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 283 consensus_9825#2 GCTAGCACCTAACGC-ACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 297 consensus_9825#0 GCTAGCACCTAACGC-ACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 287 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATT-ATGTGGTTCGTGAT 305 consensus_9825#3 CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGAT 343 consensus_9825#2 CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATT-ATGTGGTTCGTGAT 356 consensus_9825#0 CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATT-ATGTGGTTCGTGAT 346 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 ACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACG 365 consensus_9825#3 ACC--------------------------------------------------------- 346 consensus_9825#2 ACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACG 416 consensus_9825#0 ACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACG 406 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 TCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGA 425 consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 TCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGA 476 consensus_9825#0 TCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGA 466 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 GGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAG 485 consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 GGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAG 536 consensus_9825#0 GGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAG 526 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 GGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGAT 545 consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 GGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGAT 596 consensus_9825#0 GGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGAT 586 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 TTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGG-AAGAAGAAATGCG 604 consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 TTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCG 656 consensus_9825#0 TTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGG-AAGAAGAAATGCG 645 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 CGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTG 664 consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 CGACACT----------------------------------------------------- 663 consensus_9825#0 CGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTG 705 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 TTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC----------------- 707 consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 ------------------------------------------------------------ consensus_9825#0 TTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAA 765 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 ------------------------------------------------------------ consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 ------------------------------------------------------------ consensus_9825#0 ATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATA 825 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 ------------------------------------------------------------ consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 ------------------------------------------------------------ consensus_9825#0 AATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTT 885 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 ------------------------------------------------------------ consensus_9825#3 ------------------------------------------------------------ consensus_9825#2 ------------------------------------------------------------ consensus_9825#0 TATTTTTTTATAAAGGCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATT 945 consensus_9825#4 ------------------------------------------------------------ consensus_9825#1 ------------------------------------------------ consensus_9825#3 ------------------------------------------------ consensus_9825#2 ------------------------------------------------ consensus_9825#0 AATTCTGTACTTAAAATCGAACATCCTTTTTGGCAAGCCATTTGTGGC 993 consensus_9825#4 ------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||