These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9831#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1068 fasta sequence [CATCAACCAAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAAC-AAACTGCTAATCAGCAGG-TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG-AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG-CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAATTGGGTTAAAAAAAAAAAAAAAAAAGGCCCAGGTCCCCGGC] [+] EMBL CNS08W2X [CATCAACCAAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGTTTGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGAAAAAAACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCAGGTCCCCGGC] [+] EMBL CNS08UAD [ ccAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACGTAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAAAGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCAATTCAC ] [+] EMBL CNS09RC4 [ tCAT CA CCCGCACCGATACGGAA CAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTT ] [+] EMBL CNS08VQD [ CACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAAAAAAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAAaa ] [+] EMBL CNS08TGM [ ACCCCGCACCGATACGGAACCAAC AAACTGCTAATCAGCAGGATGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGG ] [-] EMBL CNS09RC5 [ ATACGGAACCAACAAAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT GACCGACAGAATTG ] [+] EMBL BM610062 [ ccgCGGAACCAAC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGACACCGTCGCGTGCCGCCAGCAAGCAGGCC ] [+] EMBL BM624622 [ ccgC AAACTGCTAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGC ] [+] EMBL CNS097NP [ cAATCAGCAGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGGAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCA ] [+] EMBL BM619392 [ ccGG TGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCA ] [+] EMBL CNS09HDL [ CTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGCCAAG AAAACATTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAACAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCA ] [-] EMBL CNS08W2Y [ ATTTTTTTTAATTGTGTATCAAAAAGTACGCTTCCAGCCACG AAAACCTTCCAAAAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGGACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTTTCGCACGGAAAAGTACCAAAAGCTGAAGGGGGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAAACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAAAAACCGCGGTTTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTTTGGCCCCCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGGTGAGCCATCGAAACCTGCCCGGCGATAACTACACCGAGTGTTCCTTCTTTTTTTTCTACATCCTCTGCACGATGTCCATCCGGCAAAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGAAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTAACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT GACCGACAGAAaa ] [-] EMBL CNS097NQ [ TGGGAGAAGGATTAACCTGGGTGATGGTTTTTCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAAACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGGAAAGCTGAAGAACAACAACCGCGTTCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCCCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT GACCGACAGAATTGGGTTttctagg ] [+] EMBL BX608446 [ AATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAATTGGGg ] [-] EMBL CNS08TGN [ GCGATGAGGAAAAGCTGAAGAACAACAACCGCGGTCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCCCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCGACAGAATTGGGTTgg ] [+] EMBL BX608812 [ CGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGAT ] [-] EMBL CNS08VQE [ CTGCACGATGTCCACCCGGCAGAACATCCAGAATTTGTTGGGCTTTG CACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGACCG ] consensusID : consensus_9831#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 972 fasta sequence [CCCCAGGTTTACTGAAGGAGAAAAAACAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCA-GGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAACACTCCACCACACCACGACCGGACGGGTTTGACTACCACCACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGAATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAATCTTTCGTTTCAAAGATGGACCGACAGAATTGGGGTTTGTCTAG] [+] EMBL AL694231 [CCCCAGGTTTACTGAAGGAGAAAAAACAATTGCTGTTGATTATTCCTATAAATTGTGTATCAAAAAGTACGCTTCCAGGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCA GGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGC ] [+] EMBL BM634670 [ ccGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAACACTCCACCACACCACGACCGGACGGGTTTGACTACCACCACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGAATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAATCTTTCGTTTCAAAGATGGACCGACAGAATTGGGGTTTGTCTAG] consensusID : consensus_9831#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 968 fasta sequence [CCAATTGCTGTTGATTATTCCTATAAATTGTGTATAAAAAGTACGCTTCCAGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCAAAAAAACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACTGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGC-GCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATGTTCTC] [+] EMBL CNS09EUO [CCAATTGCTGTTGATTATTCCTATAAATTGTGTATAAAAAGTACGCTTCCAGCCACGAAAACCTTCCAACAAGCTCGACCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGGGAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAGAAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAGACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCGATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCAAAAAAACTGCTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCAATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACTGAGTGTTCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATGCTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGC GCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATGTTCTC] [-] EMBL CNS09HDM [ TGCCGCAAGAAAGCAGGCCGGAGGATTGTTCGGACCAACGCCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACATAAACCGGGGGCAACGAAACAATTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGCGGGGGGGGGGGGGGATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTAGTAGTAGTAGGATTTGTGTGTGTT ] [-] EMBL CNS08UAE [ TGACCGGACGGGTTTGACTACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAGCAACAAAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATTTAAACGGGCGC GCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAAAAAGTAGTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAAGA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9831#0 CATCAACCAAAGCAGATGACACTTTTCCATCCACCCCGCACCGATACGGAACCAACAAAC 60 consensus_9831#2 ------------------------------------------------------------ consensus_9831#1 ------------------------------------------------------------ consensus_9831#0 TGCTAATCAGCAGGTGCTAACACACTTGAAGGAGAAAAAACCAATTGCTGTTGATTATTC 120 consensus_9831#2 ----------------------------------------CCAATTGCTGTTGATTATTC 20 consensus_9831#1 ---------------CCCCAGGTTTACTGAAGGAGAAAAAACAATTGCTGTTGATTATTC 45 ******************* consensus_9831#0 CTATAAATTGTGTATCAAAAAGTACGCTTCCAG-CCACGAAAACCTTCCAACAAGCTCGA 179 consensus_9831#2 CTATAAATTGTGTAT-AAAAAGTACGCTTCCAG-CCACGAAAACCTTCCAACAAGCTCGA 78 consensus_9831#1 CTATAAATTGTGTATCAAAAAGTACGCTTCCAGGCCACGAAAACCTTCCAACAAGCTCGA 105 *************** ***************** ************************** consensus_9831#0 CCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGG 239 consensus_9831#2 CCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGG 138 consensus_9831#1 CCAACATGTGGGCCGATACGCTGCTAATTGTTTTCATATCCATTTTCACCGCACTGCTGG 165 ************************************************************ consensus_9831#0 GAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAG 299 consensus_9831#2 GAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAG 198 consensus_9831#1 GAGAAGGATTAACCTGGGTGATGGTTTATCGCACGGAAAAGTACCAAAAGCTGAAGGGAG 225 ************************************************************ consensus_9831#0 AAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAG 359 consensus_9831#2 AAGTCGAAAAGCAGAGCAAAAAATTGGAAAAACGGAAAGAAACGCTCGGCGAATCGTTAG 258 consensus_9831#1 AAGTCGAAAAGCAGAGCAAAAAATTGGAAAA-CGGAAAGAAACGCTCGGCGAATCGTTAG 284 ******************************* **************************** consensus_9831#0 ACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCG 419 consensus_9831#2 ACAAGAACCACAAAAAGAAAATCGAACGCGATGAGGAAAAGCTGAAGAACAACAACCGCG 318 consensus_9831#1 ACAAGAACCACAAAAAGAAAATCGAACGCGACGAGGAAAAGCTGAAAAACAACAACCGCG 344 ******************************* ************** ************* consensus_9831#0 ATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCA-CTG 478 consensus_9831#2 ATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCAAAAAAACTG 378 consensus_9831#1 ATCTGTCGCTGGTCAAGATGAAGTCAATGTTTGCCATCGGTTTCGCGTTCACCGCA-CTG 403 *************************************************** * *** consensus_9831#0 CTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCA 538 consensus_9831#2 CTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCGTTCGTGCCA 438 consensus_9831#1 CTCAGCATGTTCAACAGCATTTTCGATGGGCGAATTGTGGCCCGCCTACCCTTCGTGCCA 463 ************************************************** ********* consensus_9831#0 ATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGT 598 consensus_9831#2 ATCTCGTGGATCCAGGGGCTGAGCCATCGAAACCTGCCCGGCGATGACTACACTGAGTGT 498 consensus_9831#1 ATCTCGTGGATCCAGGG-CTGAGCCATCGAAACCTGCCCGGCGATGACTACACCGAGTGT 522 ***************** *********************************** ****** consensus_9831#0 TCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATG 658 consensus_9831#2 TCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATG 558 consensus_9831#1 TCCTTCATCTTTCTCTACATCCTCTGCACGATGTCCATCCGGCAGAACATCCAGAAGATG 582 ************************************************************ consensus_9831#0 CTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACG 718 consensus_9831#2 CTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACG 618 consensus_9831#1 CTGGGCTTTGCACCGTCGCGTGCCGCCAGCAAGCAGGCCGGAGGATTGTTCGGACCAACG 642 ************************************************************ consensus_9831#0 CCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGAC 778 consensus_9831#2 CCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAGCACTTCACCACAGCATGACCGGAC 678 consensus_9831#1 CCGGGACAGTTTAAGTAAATGTGGCTGATCGTGGAACACTCCACCACACCACGACCGGAC 702 *********************************** **** ******* ** ******** consensus_9831#0 GGGTTTGACTACCACCACCACCA------ATCGCCTTTTGTGGCAACTAATATTTAACAG 832 consensus_9831#2 GGGTTTGACTACCACCACCACCA------ATCGCCTTTTGTGGCAACTAATATTTAACAG 732 consensus_9831#1 GGGTTTGACTACCACCACCACCACCACCAATCGCCTTTTGTGGCAACTAATATTTAACAG 762 *********************** ******************************* consensus_9831#0 CAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATT 892 consensus_9831#2 CAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATT 792 consensus_9831#1 CAACATAAACCGGGGGCAACGAAACAGTTTATTTAAAAGACCAACGAATAACGCGCCATT 822 ************************************************************ consensus_9831#0 TAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTA 952 consensus_9831#2 TAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTA 852 consensus_9831#1 TAAACGGGCGCGCGCGTTCGTTACATTTGTTTTCATTGCATTTTGTTTTGTTAATAAGTA 882 ************************************************************ consensus_9831#0 GTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAA 1012 consensus_9831#2 GTAGTAGTAGGATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAAGCTTTCGTTTCAAA 912 consensus_9831#1 GTAGTAGTAGAATTTGTGTGTGTTTCAGCGATCGAGATTAAATAAATCTTTCGTTTCAAA 942 ********** *********************************** ************* consensus_9831#0 GATGGACCGACAGAATTGGGTTAAAAAAAAAAAAAAAAAA---GGCCCAGGTCCCCGGC 1068 consensus_9831#2 GATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATGTTCTC--- 968 consensus_9831#1 GATGGACCGACAGAATTGGGGTTTGTCTAG----------------------------- 972 ****** * * ** * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||