These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9871#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1231 fasta sequence [CCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAG-AAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA-CCGGTGCTGCG-AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG-CTGCAAC-ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG-CCGTG-CCGGTGCATGAAATCTTTCGA-CCAGTTCTTGT-CCGCCTCGA-TCTGTGCACCGCGTCG-CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC-GGCCAGCGGGTCCTCCGG-CCCGACCGCTACCAG-ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGGGTCCGCCCACGCGTCCGCGGACGCGTGGGCGG] [+] EMBL CNS08F7V [CCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAGCAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA CCGGTGCTGCG AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTCCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAA ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCAC ] [+] EMBL CNS08HKW [ CTGCTCACTGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAG AAATGTGCATCGAACAAACGAAAAAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCCGGTGCTGCGCAACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGG ] [+] EMBL CNS08T0F [ AAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAA AAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA CCGGTGCTGCG AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTTATAACGCAGCCCTTGGTGGATTTTTCTGGGTAGCCCTTGCTGGCCATCACTAAACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTTTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTTTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTAAAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTCCC ] [+] EMBL CNS090AB [ AAAG AAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAA CCGGTGCTGCG AACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTTTGATAACGCAGCCCTTGGGGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCA ] [-] EMBL CNS08F7U [ CCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ] [-] EMBL CNS090AA [ CCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ] [-] EMBL CNS08T0E [ AGATCGGTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATG TTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGTTTTTT TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ] [-] EMBL CNS08X6S [ GACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG TTGCAAC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACGGCGGGCCATCTTCCAGCAGATGGTTTTTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ] [+] EMBL CNS08X6T [ ACCGTTGTTCTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACG CTGCAAC ACCAGTTCCGGGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTTT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTC ] [-] EMBL BM613681 [ ctagcCCGCTCGCCTTCCACGACCAGTGCCGCGTACGGTGCGCTGCGGATGAACGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CTGCCTCGA TCTGTGCACCACGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCACTCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTTGTTCTCTGGCCAATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGG ] [-] EMBL BX628840 [ CACC ACCAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGG ] [-] EMBL CNS08HKV [ CAGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAATTCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGTTCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ] [-] EMBL BM595161 [ GCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGCCCACGCGTCCGCCCACGCGTCCGCGG ] [-] EMBL BM575266 [ GCGGATGAATGTTTTCGCTTCGGCTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCAA TCTGTGCACCGCGCCG CCCGGGGCCGAAGCATTTGATGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG GCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACATCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACAACTGATTCTAGCACTGAATCGATGTCGAATTTGTACTACACCAAGGCCTACTTCGTTCGTTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTcgg ] [-] EMBL BM602776 [ CTGCATCGGTGAAGCTGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGG ] [-] EMBL BM590694 [ TCGGTGAAGCTGGCGTACCGGGCCGTCGGTATGCCCGTG CCGGTGCATGAAATCTTTCGACCCAGTTCTTGT CCGCCTCGATTCTGTGCACCGCGTCGCCCCCGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATCGGGCCAGCGGGTCCTCCGGCCCCGACCGCTACCAGAATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCGACGGATTCGG ] [-] EMBL CNS08LNG [ TGGCGTACCGGGCCGTCGGTATG CCGTG CCGGTGCATGAAATCTTTCGA CCAGTTCTTGT CCGCCTCGA TCTGTGCACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGT CTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCA CTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGTATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCG ] [-] EMBL BM631476 [ TG CCGTGCCCGGTGCATGAAATCTTTCGA CCAGTTCTTGTCCCGCCTCAA TCTGTGCACCGCGCCG CCCGGGGCCGAAGCATTTAATGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG GCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCACTCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTTGTTCTCTGGCCAATCTTGGCGATCCGTGTTAGCTGATCGACGcgg ] [-] EMBL BM607578 [ CACCGCGTCG CCCGGGGCCGAAGCATTTGAGGCCGGCCGTCTGCAGCGCGTCGGCCAGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGACGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTG ] [-] EMBL BM594776 [ AGCCCATC GGCCAGCGGGTCCTCCGG CCCGACCGCTACCAG ATCGATCTGGTTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGCTGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCACTCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTACTACACCAAGGCCTACTTCGTTTGTTCTCTGGCCAATCTTGGCGATCCGTGTTAGCTGATCGACGGATT GAG CCG GACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL AL694790 [ ACGTGCACCGTGTCCACCCGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACCAGCACCTTCTTGAGTGCACCACTGTCCTGTACCATTTTCGGCCGCGCGGTTATGGCGTCCAACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGCGAAGGGACGCTTGCACCAAGAGGAAGGTCACTGAATGCTACAACTGATTCTAGCACTGAATCGATGTCGAATTTGTACTACACC AGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGATCtaaacctc ] consensusID : consensus_9871#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence [TTTTTTGAGCTTTAACGCCCCCCCCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAACCGTCGAAGCTGATCGCGGTGCTGCAGGCGGACGTAGCGTGCGCCGCAGCCTGCTTCAGGTCGCTGTGCAGCACGACGGTGATCAGCACCCGGCCACCGTTCGTCACGAACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGACATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACCTCCCGCACGACCAGATCCAGCTG] [+] EMBL CNS08LNH [TTTTTTGAGCTTTAACGCCCCCCCCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTCCGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATGCTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAACCGTCGAAGCTGATCGCGGTGCTGCAGGCGGACGTAGCGTGCGCCGCAGCCTGCTTCAGGTCGCTGTGCAGCACGACGGTGATCAGCACCCGGCCACCGTTCGTCACGAACTCTCCGCGCTCGTTCCGGGCCACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATAACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCGCTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCCATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCGAACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGACATCATGCCAGCGTACAAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACCTCCCGCACGACCAGATCCAGCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9871#0 -----------------------CCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTC 37 consensus_9871#1 TTTTTTGAGCTTTAACGCCCCCCCCTACTGCTCACGGGGAAGCATTTATTTCCAAATTTC 60 ************************************* consensus_9871#0 CGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATG 97 consensus_9871#1 CGAACAAAAAAATGAAAAAGAAATGTGCATCGAACAAACGAAATAGACGAACAAACGATG 120 ************************************************************ consensus_9871#0 CTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAAC----------- 146 consensus_9871#1 CTTTACTGTTTGAATGCTTTCTGCGCGATGTCCAACCGGTGCTGCGAACCGTCGAAGCTG 180 ************************************************* consensus_9871#0 ------------------------------------------------------------ consensus_9871#1 ATCGCGGTGCTGCAGGCGGACGTAGCGTGCGCCGCAGCCTGCTTCAGGTCGCTGTGCAGC 240 consensus_9871#0 ---------------------------------------TCTCCGCGCTCGTTCCGGGCC 167 consensus_9871#1 ACGACGGTGATCAGCACCCGGCCACCGTTCGTCACGAACTCTCCGCGCTCGTTCCGGGCC 300 ********************* consensus_9871#0 ACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATA 227 consensus_9871#1 ACTCCCGAATGGAACACGAGATGCTCCGGGCGTGCAGCAACAGCGTCCAGTCCTGTGATA 360 ************************************************************ consensus_9871#0 ACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCG 287 consensus_9871#1 ACGCAGCCCTTGGTGGATGTTTCTGGGTAGCCCTTGCTGGCCATCACTACACCGACCGCG 420 ************************************************************ consensus_9871#0 CTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCC 347 consensus_9871#1 CTCAGCCCGGCCCGGAACTTGAGATTGATCTCGTGCAGCCGATCGTCGCAGGTCGCCTCC 480 ************************************************************ consensus_9871#0 ATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCG 407 consensus_9871#1 ATCACCTCGTACAGATCGCTCTCGAGCAGTGGCAGGATGACCTGTGTCTCCGGATCGCCG 540 ************************************************************ consensus_9871#0 AACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGAGCATCATGCCAGCGTAC 467 consensus_9871#1 AACCGGCAGTTGAATTCGAGTGTTTTTGGCCCGTTCGGCGTGA-CATCATGCCAGCGTAC 599 ******************************************* **************** consensus_9871#0 AAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACC 527 consensus_9871#1 AAAACACCGTTGTACTTGATGCCTTCCGCTCGCAGTCCATCCACCGCACGCTGCAACACC 659 ************************************************************ consensus_9871#0 AGTGCCGCGTACGGTGCGCTGCGGATGAATGCTTTCGCTTCGGCTGCATCGGTGAAGCTG 587 consensus_9871#1 ----TCCCGCACGACCAGATCCAGCTG--------------------------------- 682 * ** *** * * * * ** consensus_9871#0 GCGTACCGGGCCGTCGGTATGCCGTGCCGGTGCATGAAATCTTTCGACCAGTTCTTGTCC 647 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 GCCTCGATCTGTGCACCGCGTCGCCCGGGGCCGAAGCATTTGAGGCCGGCCGCCTGCAGC 707 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 GCGTCGGCCAGCCCATCGGCCAGCGGGTCCTCCGGCCCGACCGCTACCAGATCGATCTGG 767 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 TTCAGCTTGCACCAGGCTACGATGGCACTAAAGTCCTTCACGCTAACACCGGACACTAGC 827 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 TGCACCTTCGGAAGGGCCGCAATGCCGGGACTGCCGGGGAGCACGTGCACCGTGTCCACC 887 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 CGTTCACTGCGGGCCATCTTCCAGCAGATGGCATGTTCACGGCCACCGCCACCGATCACC 947 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 AGCACCTTCTTGAGGGCACCACTGTCCTGTACCATTTTCGGCGGCGCGGTTATGGCGTCC 1007 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 AACACAATCAGCAACCCTAATTGAGCTTGATTAGACCTTGCGTGAAGGGACGCTTGCACC 1067 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 AAGAGGAAGGTCACTGAATGCTACGACTGATTCCAGCACTGAATCGATGGGGAATTTGTA 1127 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 CTACACCAAGGCCTACTTCGTTCGCTCTCTGGCCGATCTTGGCGATCCGTGTTAGCTGAT 1187 consensus_9871#1 ------------------------------------------------------------ consensus_9871#0 CGACGGATTCGGGTCCGCCCACGCGTCCGCGGACGCGTGGGCGG 1231 consensus_9871#1 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||