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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9895#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1331 fasta sequence
[TACTGGTTCCAGTTTCGGTTTTGTGTGTGTGT-AA-CCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA-CGGTACGATGAG-CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG-AGATGCCCCACGC-TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG-ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC-AGCTCGG-AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT-CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA-CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT-CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA-GGGT--CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT-CCGGCTTACGGAAGCGCTGCACTCTGGGGGATTCGTGGTTTTCTTCAATTTTTGATTATCAATCG]
[+] EMBL CNS09I86 [TACTGGTTCCAGTTTCGGTTTTGTGTGTGTGTAAA CCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGAAGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAAATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGGGG ]
[+] EMBL CNS09DOY [ gcacCGGTTTTGTGTGTGTGT AACCCAACATGCTTTTATTCCGAAGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGC GCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGG ]
[+] EMBL CNS09OAN [ GGTTTTGTGTGTGTGT AA CCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTTTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGAAGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGC GCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTTTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCA GCAGG AGAAGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCGGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGCACGGGTCGAGAATGCCCAGGTACAGCA ]
[+] EMBL CNS09PCG [ tttttTTTTGTGTGTTTGTAAA CCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTTTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGAAGACCGCCGGCAGCCGCCCTCGAGCTGCTGGCTGAGAGATTTCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATTGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTTTTGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGAAGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTTGCGCTCCCGGAACACCTTGTCCAGTTACATCTTGCCC AGCTCGG AGCGCATTGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGG ]
[+] EMBL CNS08NXD [ GT AA CCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGC GCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGCCAGG AGATGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACT ]
[+] EMBL CNS09Q9R [ A CCAACATTCTTTTATTTCGAAGGAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTTGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAGTCGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTTTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGATGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCG ]
[+] EMBL CNS09OCG [ TATTTCG AGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTTTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGTCAGG AGATGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTtt ]
[+] EMBL CNS09K8A [ ATTTCG AGAAGAACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGTATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCA GCAGG AGATGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCT ]
[+] EMBL CNS09RSV [ CCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTTTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGATCGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCG ]
[-] EMBL CNS09PCF [ CCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTA TTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCTCGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGA CGGTACGATGAG CGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATTGCGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCG TCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGATG CCCGCCC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTT ]
[-] EMBL CNS09OCF [ TCGGCCACGATTTTCAGACTTTTCGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCCGTTGCGCCG TCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGATGCCCCACCC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTATCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAAGCGCTGCACTCTGGGGGATTCGTGG ]
[-] EMBL CNS09Q9Q [ CGCACGCGCATCGGCCAGCGCCATGAT GCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCAACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCCGTTGCGCCG TCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGATGCCCCCCCC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGACCTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATAAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCTCCCGGCTTACGGAAGCGCTGCACTCTGGGGGATTCG ]
[-] EMBL CNS09K89 [ CGCATCGGCCAGCGCCATGATTGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTCGGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCG TCCGCCTCCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGATG CCCTCCC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGAAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAAGCGCTGCACTCTGGGGGATTC ]
[-] EMBL AGA284726 [ TGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGG AGATGCCCCACGC TTCGCTCGCCTGTTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGTACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATGACCGT ]
[-] EMBL CNS09DOX [ TGATGTCGCGGATTTCGTACCGCAGGCAGG AGATGCCCCCCCC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAATCGCTGCACTCTGGGGGATGCGTGGTTTTCTTCAATTTTTGATTATCAATCG]
[-] EMBL BX607095 [ TGATGTCGCGGATTTCGTACCGCAGGCAGG AGATGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGCTTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GTGTCGCTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATCTTATGTACCTTTGATCGGGACCGTGGGCTTTCGGATGTTTTCT CCGGCTTACGGAATCGCTGCACTCTGGGGGATTCGTGGTTTTCTTCAATTTTTGAT ]
[-] EMBL CNS09OAM [ GGATTTCGTACCGCAGGCAGG AGATG CCCACGCATTCGCTCGCCTTGTTGATCGACTCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAAGCGCTGCACTCTGGGGGATTCGTGGTTTTCT ]
[-] EMBL BM594264 [ CAGGAAGATGCCCCACGC TTCGCTCGCCTTGTTGATCGACTCCACGATGCTGAATGTTGAGCGACTCGCGCTCCCGGAACACTTTTTCCAGTGACATCTTGCCCAAGCTCGGAACCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGATCCCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGTTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGCTTGCAGTGCCGCCAGGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGTCGCTGCCGCGATACCACGCAACGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAATCGCcgg ]
[-] EMBL CNS09F6R [ TCCACGATGCTG ATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCC AGCTCGG AGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGT CCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCC TTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGAGGGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT C ]
[-] EMBL CNS09I85 [ tTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGA CTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGAT CCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGATTGCAGTGCCGCCAGGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGA GGGT CTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAAATGCTGCACTCT GGGGATTCGTGG TTTCTTCAAT ]
[-] EMBL BX625878 [ AATTNGCCCATCCGTTCCACGATCCCATNCTTCTTGCTGGGGCACAACCATTATGACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGTGTTGCTTGCAGTGCTGCCAAGCTGGGTGGCGATTGCAACAGACCACTATTGCTGTTGA GTGTCGCTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCT CCGGCTTACGGAATCGCTGCACTCTG ]
consensusID : consensus_9895#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence
[CCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGGAGATGCCCTCTCTTCGCTCGCCTTGTTGATCGACTCCACGATGCTGATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCCAGCTCGGAGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGTCCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGACTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGATCCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGAGGGTCTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCTCCGGCTTACGGAAGCGCTGCACTCTGGGGGATTCGTGGTTTTCT]
[-] EMBL CNS08NXC [CCACCTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCGCAGGCAGGAGATGCCCTCTCTTCGCTCGCCTTGTTGATCGACTCCACGATGCTGATGTTGAGCGATTCGCGCTCCCGGAACACCTTGTCCAGTGACATCTTGCCCAGCTCGGAGCGCATCGTCGTTTGGGCGAGCTGGGTGATGGCAAACTCCGGGTCCTCCACACCGTACGACGCGAGGTACGGGTCGAGAATGCGCAGGTACAGCACACCGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATTGCGATTTCCTTCAGACTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTCAGGCCGGGCTCGAGGATGCGGTGAAATTTGCCCATCCGTTCCACGATCCATGCCTCTTGCTGGGGCACAAACATTATCACCGTGTTGAGGGTCTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATTATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCTCCGGCTTACGGAAGCGCTGCACTCTGGGGGATTCGTGGTTTTCT]
consensusID : consensus_9895#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence
[CATGCTGCTTTTTTGNTGGATTTTTTTTGTGTGTGTAAACCCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTATCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCCCGCCTGATGTCCGCCGGCAGCTGCCCTCGAGCTGGCTGAGAGATTGCTGTANATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGAAGGTACGATGAGCGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGNACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTTGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGC]
[+] EMBL BX466649 [CATGCTGCTTTTTTGNTGGATTTTTTTTGTGTGTGTAAACCCAACATGCTTTTATTTCGAAGAAGAACCACCCCCCATACTGCTATCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCCCGCCTGATGTCCGCCGGCAGCTGCCCTCGAGCTGGCTGAGAGATTGCTGTANATCTGCATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGAAGGTACGATGAGCGTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGCCGNACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTTGCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTGCTTCTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9895#0 TACTGGTTCCAGTTTCGGTTTTGTGTGTGTGTAACCAACATGCTTTTATTTCGAAGAAGA 60
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 ACCACCCCCCATACTGCTGTCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTGTCGCGTC 120
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGTCACCGCT 180
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CGCCTGATGACCGCCGGCAGCTGCCCTCGAGCTGCTGGCTGAGAGATTGCTGTAGATCTG 240
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CATTGCTTGTGCCACCATCGACGTCACGTCGGACGCGGTCGACGGTACGATGAGCGTGTT 300
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 GTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGCGATGC 360
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CGCACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTCGCACG 420
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCCTCCTG 480
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CTTCTGCGCCTCGGAGGCAAGGATGCGCGACTGTCGCTTACCCTCGGCCACGTTAATGTC 540
consensus_9895#1 ------------------------------------------------------------
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 GGCCGCCCGGACACCCTCCGACTCGAGGATCGCGGCCCGCTTGCGCCGCTCCGCCTCCAC 600
consensus_9895#1 --------------------------------------------------------CCAC 4
consensus_9895#2 --------------------------------------------------------CATG 4
*
consensus_9895#0 CTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCG 660
consensus_9895#1 CTGCATCTGCATCGCTTCGTGCACCCGGCTCGGCAGCTTGATGTCGCGGATTTCGTACCG 64
consensus_9895#2 CTGCTTTTTTGNTGGATTTT-TTTTGTGTGTGTAAACCCAACAT----GCTTTTATTTCG 59
**** * * * * * * * * * * * * *** * **
consensus_9895#0 CAGGCAGGAGATGCCCCACGCTTCGCTCGCCTTGTTGATCGACTCCA--CGATGCTGATG 718
consensus_9895#1 CAGGCAGGAGATGCCCT-CTCTTCGCTCGCCTTGTTGATCGACTCCA--CGATGCTGATG 121
consensus_9895#2 AAGAAGAACCACCCCCCATACTGCTATCCCCGTGGTGATGGCTATCGAGCGGTGGCAGTG 119
** * *** ** * ** ** ** **** * * ** ** **
consensus_9895#0 TTGAG-------------------CGATTCGCGCTCCCGGAACACCTTGTCCAGTGACAT 759
consensus_9895#1 TTGAG-------------------CGATTCGCGCTCCCGGAACACCTTGTCCAGTGACAT 162
consensus_9895#2 TCGCGTCCAGCTTCGAACTAGTTTCACTCAGCGTCCCCAGCAGGTTCTGCGTGTTGTCGT 179
* * * * * *** *** * * ** ** * *
consensus_9895#0 CTTGCCCAGCTCGGAGCGCATCGTCGTTTGGGC--GAGCTGGGTGATGGCAAACTCCGGG 817
consensus_9895#1 CTTGCCCAGCTCGGAGCGCATCGTCGTTTGGGC--GAGCTGGGTGATGGCAAACTCCGGG 220
consensus_9895#2 CACCGCCCGCCTGATGTCCGCCGGCAGCTGCCCTCGAGCTGGCTGAGAGATTGCTGTANA 239
* ** ** * * * ** * ** * ******* *** * **
consensus_9895#0 TCCTCCACACC-GTACGACG--CGAGGTACGGGTCGAGAATG--CGCAGGTACAGCACAC 872
consensus_9895#1 TCCTCCACACC-GTACGACG--CGAGGTACGGGTCGAGAATG--CGCAGGTACAGCACAC 275
consensus_9895#2 TCTGCATTGCTTGTGCCACCATCGACGT-CACGTCGGACGCGGTCGAAGGTACGATGAGC 298
** * * ** * ** *** ** * **** * ** ****** *
consensus_9895#0 -CGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATT 931
consensus_9895#1 -CGTCGATGCTGAGCGTTACGTTGTCGGACGTGATGGCGGACTGTTTCGGCACGTCTATT 334
consensus_9895#2 GTGTTGTTGTGTTTGGCCAGCTTCTCGAACGCGACCACGTACTTTTCCGCCACGCTCAGC 358
** * ** * * ** *** *** ** ** *** ** ** **** *
consensus_9895#0 GCGATTTCCTTCAGACTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTC 991
consensus_9895#1 GCGATTTCCTTCAGACTCTGCACGTACTTCACCCGGTCCACCACGGGCAGCAGGACGTTC 394
consensus_9895#2 GATGCCGNACTGCGGCCATGCTCGTTCGCCAGCGATTCGGCCACGATTTTCAGACTTTTT 418
* * * * *** *** * ** * ** ***** *** **
consensus_9895#0 AGGCCGGGCTCGAGGA----TGCGGTGAAATTTGCCCATCCGTTC-CACGATCCATG-CC 1045
consensus_9895#1 AGGCCGGGCTCGAGGA----TGCGGTGAAATTTGCCCATCCGTTC-CACGATCCATG-CC 448
consensus_9895#2 GCACGCGCATCGGCCAGCGCCATGATGGCGGCCGCCTCACCATTCGCCCGATTGATCTCC 478
* * *** * * ** *** ** *** * **** ** **
consensus_9895#0 TCTTGCTGGGGCACAAACATTATCACCGTGTTGATCGGTGTCGATCGGTGGCGGACCTGT 1105
consensus_9895#1 TCTTGCTGGGGCACAAACATTATCACCGTGTTGA-------------------------- 482
consensus_9895#2 TCCTGCTTCTGC------------------------------------------------ 490
** **** **
consensus_9895#0 GTTGATTGCAGTGCCGCCAAGCTGGGTGGCGATTGCAACAGACCACCATTGCTGTTGAGG 1165
consensus_9895#1 ----------------------------------------------------------GG 484
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 GTCTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATT 1225
consensus_9895#1 GTCTGCCGCGATACCACGCAGCGGTAGCCGGCTGATGAACGCACTGGAACGTATCATATT 544
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 ATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCTCCGGCTTACGGAAGCGCTG 1285
consensus_9895#1 ATGTACCTTTGATCGGGACCGTGTGCTTTCGGATGTTTTCTCCGGCTTACGGAAGCGCTG 604
consensus_9895#2 ------------------------------------------------------------
consensus_9895#0 CACTCTGGGGGATTCGTGGTTTTCTTCAATTTTTGATTATCAATCG 1331
consensus_9895#1 CACTCTGGGGGATTCGTGGTTTTCT--------------------- 629
consensus_9895#2 ----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||