These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9896#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1945 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGCCGAAGCCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA-GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT-GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGCGGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAA-TTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACTGAATCTGACCGGGCAGAAACAGCCCAGTGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGT] [+] EMBL BM576741 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCCGAAGCCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATA ] [+] EMBL BM623485 [ ccgGCCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTGGCTATTATTATCCCAGGGCGCACCAACTATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAATCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATCGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGGTTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCTGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTCATACTGGCCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGC ] [+] EMBL BM607658 [ ccgCGACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCGGAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAAGAGAGCCTG ] [+] EMBL BX601787 [ GACTCTACGTCGTTCGCTTGCAGTGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACACCGACCTCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGg ] [+] EMBL BM640818 [ ccgCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTACTCCAACGCCCCGGTCTCCTCCCAGCCAGCTTCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCTGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAAGGGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGGCTGGCCCAATCGTCCGTATCGTTTGAGGAGATACAGCTGCTCCAGAAGCTTAGCATGGGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATG ] [+] EMBL BM622414 [ ccgCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCAGGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGAT ] [+] EMBL BM635524 [ ccgGTTGCGAGAGGGGACGGAAACTAGTGGCTATTATTATCCCAGGGCGCACCAACTATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAATCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATCGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGGTTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCTGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTCATACTGGCCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAAGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCA ] [+] EMBL AGA285699 [ TCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTCGTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGTCTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCCCACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCCGAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCATGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAACAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGA ] [+] EMBL BX608467 [ ACCATCACCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGAATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCAATCGATCGAGAACAA GGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGCGGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGT ] [+] EMBL BM645836 [ ccgGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCCGACCGCGTCCTTCATACTGGCCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGCCGGCTGTCGGGTGAGCTAGCGGCGGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAGATTGGCCGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTCGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTT ] [-] EMBL AGA284393 [ ACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGCCCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCAT GGAGCACAGCCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCG ] [+] EMBL BX605293 [ CGATGCGCAAGAACTTTACCTCCATACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCAGCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGCGGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAATTTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCA ] [+] EMBL AGA280797 [ ACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATG ] [+] EMBL AGA280500 [ ACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCTGCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTACGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTCCAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGC ] [+] EMBL BX617166 [ TGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAA TTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGTCCGGTGAAAAGAGCCGCATTTTGGGCGA ] [+] EMBL BX608730 [ ATGCGTAAAGTATATGTCGATGAGATCAA TTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACTGAATCTGACCGGGCAGAAACAGCCCAGTGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGT] [+] EMBL BM577951 [ ccgGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACTGAATCGGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTGCAGCAGGCTACATCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTCAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCGCACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAA ] consensusID : consensus_9896#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 715 fasta sequence [CAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTTTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGAGGAAGAGCAGCCGCAAACTGTTAT] [+] EMBL BX612858 [CAACAAGCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCTGAAGCAAATCGAGCGACGCTTTTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATATGCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGG ] [+] EMBL BX614321 [ AGGCAAACCTGAAAACAGCGGAACAAGTGTACGCAGCGGGCCGCGACGAGGCCCAGCAGCAGTCCGATGACAGCAAGGCGCGGGACG ] [-] EMBL AGA282421 [ CCCAGCGGCAGTTCGATGACATCAAGGCGCGTGACGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCATCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATT ] [+] EMBL BM583445 [ ccggGAAAGGGTACAGATGCTTACCGTGCAGTCGGACATTTTCCAGAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGGCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCGGACCGAGCAGAAACAGCCCAGCGGGCAGCAAAAATGGTACAGCAAGCTACATCAAGCCAGGAAGCCGCCGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTCAGTCTGCTGCGCTGTCCACTCTGTCTGAAGGGCTACAAGGATTTCAGCTCACTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGAGGAAGAGCAGCCGCAAACTGTTAT] [-] EMBL AGA282203 [ CGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGTGATTGAGTAGGATTTGTGGAAGAACCACACCTGTATTACCCGgg ] consensusID : consensus_9896#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence [AGCAGATACCCACACTCGAAAGAAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACGTTAGTCTTAAGAGCGATGGGTGGGGGAGATGTGTAATGTAATTTAATCTTGGTATGTTTTTGTCCCATTTTACAGTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGTCATGAATTATA] [-] EMBL BM591453 [AGCAGATACCCACACTCGAAAGAAAAGGGTACAGATGCTTACCGTGCAGTCGGACATCTTCCAGAAAGGATTTCGAAGCCGAACGTACGGCGCGCGAAGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAATGCCGAACTTACTGCGCAAGTTTCCCAAACGTTAGTCTTAAGAGCGATGGGTGGGGGAGATGTGTAATGTAATTTAATCTTGGTATGTTTTTGTCCCATTTTACAGTGAATCTGACCGGGCAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTGCAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTCTGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACGCTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGGGTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATCTTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGTCATGAATTATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9896#0 CCGCCCACGCGTCCGCCCACGCGTCCGCGCCGAAGCCGACTCTACGTCGTTCGCTTGCAG 60 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 TGAAGAAAATCCCGGAATAGTTGCGAGAGGGGACGGAAACTAGTAGCTATTATTATCCCA 120 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GGGCGCACCAACCATGTCTCTGGTCGAATCGTCCCAACGCTCGTTGGAGGATGATGAGTC 180 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GTTCATCATACTCGGCACCACGCCGACACCCTCGATGGACATCTATTCCATTGCCCCGGT 240 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CTCCTCCCAGCCAGCATCGGTGGTTGAGCGAGAAATAGCCGAATTAGCAAAATCGTTGCC 300 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CACCGTCACCAAGATGGAAACCTCCACCCAGCTCGATTCCACCACCTACAGCCTGCTGCC 360 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GAACGCCGGACCAGTGCTAAGTGCCTCGACGATTGCGTCGCAGCCAGCAAAATCGCTGCA 420 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 TGAATCATCGTCATCACCATCAGCCTCCCCGAAAGTGTCGATGATGGTTGCGTCAACCGA 480 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 ATCGGTGCAGCAGGTGCCGCCGTCACTGCGCTCGACCAAAGGCTCGCTGAAAAGCTTGCA 540 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 ATCGATCGAGAACAAGGAAAACAGCGTGCCGCCGATGGTGACGAGCGTTAGCCAAACGCC 600 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GACCGCGTCCTTTATACTGGGCGAAACGCAATCGATTCTGCACCAGTTCCCGAGCCTGGC 660 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CCAATCGTCCGTATCGTTCGAGGAGATACAGCTGCTCCAGAAGCTTAGCATGGAGCACAG 720 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CCAGCTGAAGGAGAGCCTGCAGCGGGCGAATGTGGCGATGCGCAAGAACTTTACCTCCAT 780 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 ACAGCAGCTGCAGGACGAAACGAAGGCGCGCTGTGCCGCCCAGGATGCGCTGATCGAGCA 840 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GCAGAAGCAGCAGATTGAGCAGCTTACCGAAGCAAACGGTCGGCTGGCGGGTGAGCTAGC 900 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GGCCGCGCGAAAGGAACACACCGAAAAGGAAAAAGAGCACCAGAACACGATCGTGGAGCT 960 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GCAGACGGAACTGAGCGAAATTGGACGGGTGCGTGAGGTGGAGCGCAACGCGGCCCAGTA 1020 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CGAGGTGGACGAGCTGAAGAAGGAATCGTCCGAGCGGCAGGCCATCATACAGAATCTGTC 1080 consensus_9896#1 ------------------------------------------------------------ consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CAAGCACATCGAACGCTTGGAGCTTCAAATTAAGGGCTTCGTGGTGGTGAACACCAACAA 1140 consensus_9896#1 ------------------------------------------------------CAACAA 6 consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCT 1200 consensus_9896#1 GCCGGAGGGCGATGATGGTAAGGCTAGCTTTGTTTCGGAAGAAACGCACAAGCGAGAGCT 66 consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GAAGCAAATCGAGCGACGCTTGTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATAT 1260 consensus_9896#1 GAAGCAAATCGAGCGACGCTTTTCGGTGGAGGTGGCCAAAAACTTGGAGTTTGAGGATAT 126 consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 GCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACA 1320 consensus_9896#1 GCGTAAAGTATATGTCGATGAGATCAATTGCCTGAAGGCAAACCTGAAAACAGCGGAACA 186 consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 AGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGA 1380 consensus_9896#1 AGTGTACGCAGCGGGCCGCGTCGAGGCCCAGCAGCAGTTCGATGACATCAAGGCGCGTGA 246 consensus_9896#2 ------------------------------------------------------------ consensus_9896#0 CGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAG--AAAGGGTACAGATG 1438 consensus_9896#1 CGAAACGATTGCTCAGCTGCGCCAGCAGATAACCACACTCGAAG--AAAGGGTACAGATG 304 consensus_9896#2 -----------------------AGCAGATACCCACACTCGAAAGAAAAGGGTACAGATG 37 ******** *********** ************** consensus_9896#0 CTTACCGTGCAGTCGGACATCTTCCAGAA-GGATTTCGAAGCCGAACGTACGGCGCGCGA 1497 consensus_9896#1 CTTACCGTGCAGTCGGACATCTTCCAGAA-GGATTTCGAAGCCGAACGTACGGCGCGCGA 363 consensus_9896#2 CTTACCGTGCAGTCGGACATCTTCCAGAAAGGATTTCGAAGCCGAACGTACGGCGCGCGA 97 ***************************** ****************************** consensus_9896#0 AGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAA 1557 consensus_9896#1 AGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAA 423 consensus_9896#2 AGAGCTGGCCGGTGAAAAGAGCCGCATTTTGGGCGAGTTTGAAGTGCTGCAGCGTCGCAA 157 ************************************************************ consensus_9896#0 TGCCGAACTTACTGCGCAAGTTTCCCAAAC------------------------------ 1587 consensus_9896#1 TGCCGAACTTACTGC--------------------------------------------- 438 consensus_9896#2 TGCCGAACTTACTGCGCAAGTTTCCCAAACGTTAGTCTTAAGAGCGATGGGTGGGGGAGA 217 *************** consensus_9896#0 ----------------------------------------------TGAATCTGACCGGG 1601 consensus_9896#1 ----------------------------------------------TGAATCTGACCGGG 452 consensus_9896#2 TGTGTAATGTAATTTAATCTTGGTATGTTTTTGTCCCATTTTACAGTGAATCTGACCGGG 277 ************** consensus_9896#0 CAGAAACAGCCCAGTGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTG 1661 consensus_9896#1 CAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTG 512 consensus_9896#2 CAGAAACAGCCCAGCGGGCAGCGAAAATGGTACAGCAGGCTACGTCTAGCCAGGAGGCTG 337 ************** ********************************************* consensus_9896#0 CAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTC 1721 consensus_9896#1 CAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTC 572 consensus_9896#2 CAGGAACGAACAACACTCCCGCCAATCAACCCGAGGAGGAGCAGAAGGAACCGCTTAGTC 397 ************************************************************ consensus_9896#0 TGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACG 1781 consensus_9896#1 TGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACG 632 consensus_9896#2 TGCTGCGCTGTCCGCTCTGTCTGAAGGGCTACAAGGATTTCAGCTCGCTGCAGAGCCACG 457 ************************************************************ consensus_9896#0 CTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGG 1841 consensus_9896#1 CTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGAG 692 consensus_9896#2 CTGCCGACTGTATGGGGATTGAGTAGGATTTTTGGAAGAACCACACCTGTATTACCCGGG 517 ********************************************************** * consensus_9896#0 GTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATC 1901 consensus_9896#1 GAAGAGCAGCCGCAAACTGTTAT------------------------------------- 715 consensus_9896#2 GTAGAGCAGCCGTAAACTGTTATCTTGTAATGTTAAGCTACACCTCTTATTGAGTGCATC 577 * ********** ********** consensus_9896#0 TTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGT----------- 1945 consensus_9896#1 ------------------------------------------------------- consensus_9896#2 TTAAGAAGAGTTTAATTGTGTTACAATAAAAAAAAAAATAGTGTCATGAATTATA 632 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||