These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9904#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1203 fasta sequence [CTACTGGAATTCAGCTCTGTGCAACTTCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACG-ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA-TGCCCAG-CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA-GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA-CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG--TGCGGGT--GGGG-C-CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCC-GGGGCCGGTTCGGTTTCGCTGGACACACGGGCGC-ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCT-TATTTATTTGTGTCGCATTGGTTTGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCTCAGGCAAAAGCACCATGAATCGATGCTCTTAATTTGGCCCGAAGAAATAGAGCCGG-TGAGGTTCAAGCAGTGT-GGACAAAGGAAATAAATTAAATC-ATGAAAGCATACCAAAAAAAAAAAAAA] [+] EMBL CNS08OKG [CTACTGGAATTCAGCTCTGTGCAACTTCTGGTTTGTTTGGTCGGCAACATTGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATCAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG TGCGGGT GGGG C CGGCGGTGACATTCCGGCCTCCGCACCGACCAAATTTGCGT ] [+] EMBL CNS09GEB [ CTTCTGGTTTGTTTGGGCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCAGGGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAACTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAGTTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATC ] [+] EMBL CNS08NV9 [ TTCTGGTTTGTTTGGTCGGCAACATTGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGC GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG TGCGGGT GGGG C CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCAGCACATGTCGATGGGTGCC GGGGCCGGTTCGGTTTCGCTGGACACACGGGCGC ACAAG ] [+] EMBL CNS09MEN [ TCTGGTTTGTTTGGTCGGCAACATTGTCGAA AACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGTATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCACTGCCCAGCCTGGTAGAGCTGCTCGTGCTGAAGGA ] [+] EMBL BM634355 [ ccgCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGGCTCCTGGCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCTACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAA ] [+] EMBL CNS09P8E [ actggGGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAAGCGGCCGGTCTCGTCGGAGGAGCTCATCAAGTTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG TGCGGGT GGGG C CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCC GGGGCCGGTTCGGTTTCGCTGGACACACGGGCGC ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCT TATTTATTTGTGTCGCATTGGTTTGGGTGGGTAAC ] [+] EMBL BM607307 [ ccgCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAGTTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGGGTTGCCGGTGGGGGG C CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCG ] [+] EMBL CNS0972L [ ctggagggACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGCATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGTTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATC ] [+] EMBL AGA284680 [ GCCATCATAAACG ATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGA ] [+] EMBL BX612653 [ AATGTCCAGCACCGACCA TGCCCAG CTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCA GGTTCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCTCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG TGCGGGT GGGG C CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCC GGGGCCGGTTCGGTTTCGCTGGACACACGGGCGC ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATC ] [-] EMBL CNS09P8F [ CGAACAAGCCGGCATCGAGAAAAACATGAACGCACTGCGGGAGAA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAGTTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG TGCGGGT GGGG C CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCC GGGGCCGGTTCGGTTTCGCTGAACAAACGGGCGC ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTACTGATATTTCTACTCGAGATGCT TATTTATTTTTGTCGCATTGGTTTGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCTCAGGCAAAAGCACCATGAATCGATGCTCTTAATTTGGCCCGAAGAAATAGAGCCGGTTGAGGTTCAAGCAGTGT GGACAAAGGAAATAAATTTAATC ATGAAAGCATACCAAAAAAAAAAAAAA] [-] EMBL CNS08NVA [ GGACGCACTGCGGGAGCA GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGTTCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG TGCGGGT GGGGCC CGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCC GGGGCCGGTTCGGTTTCGCTGGACACACGGGCGC ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCT TATTTATTTGTGTCGCATTGGTTTGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCTCAGGCAAAAGCACCATGAATCGATGCTCTTAATTTGGCCCGAAGAAATAGAGCCGG TGAGGTTCAAGCAGTGTGGGACAAAGGAAATA ] [+] EMBL CNS096MR [ ACTGCGGGAGC GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGTAAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAA CGGCCGGTCTCGTCGGAGGAGCTCATCAAATTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCA ] [-] EMBL CNS08OKH [ AACGATATGCATCGGAACGCGTCGACCGTGGG TGCGGGT GGGG CGCGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGGCCGGTTCGGTTTCGCTGGACAAACGGGCGC ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCAGGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCT TATTTATTTGTGTCGCATTGGTTTGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCTCAGGCAAAAGCACCATGAATCGATGCTCTTAATTTGGCCCGAAGAAATAGAGCCGG TGAGGTTCAAGCAGTGTGGGACAAAGGAAATAAATTAAATCGATGAAAGCATTCCAAA ] [-] EMBL CNS0972M [ TGCC GGGGCCGGTTCGGTTTCGCTGGACACACGGGCGCAACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCT TA TTATTTGTGTCGCATTGGTTTGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCTCAGGCAAAAGCACCATGAATCGATGCTCTTAATTTGGCCCGAAGAAATAGAGCCGGTTGAGGTTCAAGCAGTGT GGACAAAGGAAATAAATTA ] [-] EMBL AGA283388 [ ACACACGGGCGC ACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCT TATTTATTTGTGTCGCATTGGTTTGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCTCAGGCAAAAaaaa ] [-] EMBL CNS09MEO [ GCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCTGTATTTATTTGTGTCGCA ] consensusID : consensus_9904#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 909 fasta sequence [AAACACCATTCAGGTCTGTGCAAACTTCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCCCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGC-GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCG-CCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGGTGCGGGTGGGGCCGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCGGTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTAAAAAAAAAAAAAAAAAAA] [+] EMBL CNS09PP7 [AAACACCATTCAGGTCTGTGCAAACTTCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCCCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGC GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCG CCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGGTGCGGGTGGGGCCGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCGGTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACGAATCCCCCTTTCTGATATTTCTAAAAAAAAAAAAAAAAAAA] [+] EMBL CNS09BF0 [ GGTCTGTGC AACTTCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTGCTGAAGGATGGGGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGC GGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCG CCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAAATGCATCGG ] [-] EMBL CNS09PP8 [ GGTTTGTTTGGTCGGCAACATCGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCCCATATCATCTCAGCACCCGAGAACAACTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAAAAAAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCAGGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGGACAGATTCTGGCGACGTCAATTTTTCAAGCGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCG CCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGGTGCGGGTGGGGCCGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCGGTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGA ] [-] EMBL CNS09BF1 [ ACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGGTGCGGGTGGGGCCGGCGGTGACATTCCGGCCTCCGCACCGAACCAATTAACGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCGGTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGA ] [-] EMBL CNS096MS [ ACCAATTTGCGTGGCATCCGTCGGGGGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCGGTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCGACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGAACTGGTGATGAATGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAAACG ATCCCCCTTTCTGATATTTTTAAAAAAAAA ] consensusID : consensus_9904#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [CCGCCCACGCGTCCGGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCAGGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAACGGCCGGTCTCGTCGGAGGAGCTCATCAAGTTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG] [+] EMBL BM607509 [CCGCCCACGCGTCCGGTCGAAGAACGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGACTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATCGCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTGCTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAGAAAAACATGGACGCACTGCGGGAGCAGGTGCGGAAACAGGACGAGGAAATCAACCAGCTCCAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAAAAGCTGGCCAGCATTGCGAAGGCCAACAAACGGCCGGTCTCGTCGGAGGAGCTCATCAAGTTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGCGATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCGGACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGGAACGCGTCCACCGTGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9904#0 CTACTGGAATTCAGCTCTGTGCAACTTCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAA 60 consensus_9904#2 ------------------------------------CCGCCCACGCGTCCGGTCGAAGAA 24 consensus_9904#1 AAACACCATTCAGGTCTGTGCAAACTTCTGGTTTGTTTGGTCGGCAACATCGTCGAAGAA 60 * * ********* consensus_9904#0 CGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGA 120 consensus_9904#2 CGTTTCGTGCCGTCGTACAATATCGCCATGTCCTCATATCATCTCAGCACCCGAGAACGA 84 consensus_9904#1 CGTTTCGTGCCGTCGTACAATATCGCCATGTCCCCATATCATCTCAGCACCCGAGAACGA 120 ********************************* ************************** consensus_9904#0 CTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATC 180 consensus_9904#2 CTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATC 144 consensus_9904#1 CTCCTGGCCATCATAAACGATATAGAAATCGTTGCCAAGGAACTGATCGAAAACACAATC 180 ************************************************************ consensus_9904#0 GCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTG 240 consensus_9904#2 GCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTG 204 consensus_9904#1 GCACCCAAGGCGCAGAAAATGTCCAGCACCGACCATGCCCAGCTGGTAGAGCTGCTCGTG 240 ************************************************************ consensus_9904#0 CTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAGCAAGCCGGCATCGAG 300 consensus_9904#2 CTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAG 264 consensus_9904#1 CTGAAGGATAAAGAGCTGAAGGCAACGCTCCAGCTAGCGGCCGAACAAGCCGGCATCGAG 300 ******************************************** *************** consensus_9904#0 AAAAACATGGACGCACTGCGGGAGCAGGTGCGGAAACAGGACGAGGAAATCAACCAGCTC 360 consensus_9904#2 AAAAACATGGACGCACTGCGGGAGCAGGTGCGGAAACAGGACGAGGAAATCAACCAGCTC 324 consensus_9904#1 AAAAACATGGACGCACTGCGGGAGC-GGTGCGGAAACAGGACGAGGAAATCAACCAGCTC 359 ************************* ********************************** consensus_9904#0 CAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAA 420 consensus_9904#2 CAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGACAA 384 consensus_9904#1 CAGCGGCAGCTAAAGGAAGCGGAACAGATTCTGGCGACGTCAATTTTTCAAGCGCGA--- 416 ********************************************************* consensus_9904#0 AAGCTGGCCAGCATTGCGAAGGCCAACAAACGGCCGGTCTCGTCGGAGGAGCTCATCAAA 480 consensus_9904#2 AAGCTGGCCAGCATTGCGAAGGCCAACAAACGGCCGGTCTCGTCGGAGGAGCTCATCAAG 444 consensus_9904#1 ------------------------------------------------------------ consensus_9904#0 TTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGC 540 consensus_9904#2 TTTGCCCACCGCATCAGTGCGTCCCACGCGATATGTGCCCCGCTCACCTGGCAGCAGGGC 504 consensus_9904#1 -------------------------------TATGTGCCCCGCTCACCTGGCAGCAGGGC 445 ***************************** consensus_9904#0 GATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCG 600 consensus_9904#2 GATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCG 564 consensus_9904#1 GATCTTCGCCGGCCATACCCGACCGACATCGAGATGCGGCTGGGCTTTCTGGGCAAGTCG 505 ************************************************************ consensus_9904#0 GACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGG 660 consensus_9904#2 GACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGG 624 consensus_9904#1 GACCTCAACATCAACGGGCACAATCTGCAGCATCCCAACAGCTTGAACGAGATGCATCGG 565 ************************************************************ consensus_9904#0 AACGCGTCCACCGTGGGTGCGGGTGGGGCCGGCGGTGACATTCCGGCCTCCGCACCGAAC 720 consensus_9904#2 AACGCGTCCACCGTGGG------------------------------------------- 641 consensus_9904#1 AACGCGTCCACCGTGGGTGCGGGTGGGGCCGGCGGTGACATTCCGGCCTCCGCACCGAAC 625 ***************** consensus_9904#0 CAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCG 780 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 CAATTTGCGTGGCATCCGTCGGGCGAGCTGCACATGTCGATGGGTGCCGGGGCCGGTTCG 685 consensus_9904#0 GTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCG 840 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 GTTTCGCTGGACACACGGGCGCACAAGGATGCATCGCAGGATGATGTGGAAGTCATGTCG 745 consensus_9904#0 ACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAA 900 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 ACCGAAAGCTCGAGCTCGAGCTCCAGCGATTCTCAGTGAGCGGCTGGCACTGGTGATGAA 805 consensus_9904#0 TGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAA 960 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 TGTATAGGATTAAGTATTTGCCGTGTATTGTTAGCTGCATGTCGTGACTTGAGGAATGAA 865 consensus_9904#0 ACGAATCCCCCTTTCTGATATTTCTACTCGAGATGCTTATTTATTTGTGTCGCATTGGTT 1020 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 ACGAATCCCCCTTTCTGATATTTCTAAAAAAAAAAAAAAAAAAA---------------- 909 consensus_9904#0 TGGGTGGGTAACGTTCAACGTGGGCGAAACGGTCAAGACAATATTGATATAACCAGAGCT 1080 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 ------------------------------------------------------------ consensus_9904#0 CAGGCAAAAGCACCATGAATCGATGCTCTTAATTTGGCCCGAAGAAATAGAGCCGGTGAG 1140 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 ------------------------------------------------------------ consensus_9904#0 GTTCAAGCAGTGTGGACAAAGGAAATAAATTAAATCATGAAAGCATACCAAAAAAAAAAA 1200 consensus_9904#2 ------------------------------------------------------------ consensus_9904#1 ------------------------------------------------------------ consensus_9904#0 AAA 1203 consensus_9904#2 --- consensus_9904#1 --- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||