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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9926#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1488 fasta sequence
[CCCCGGCTGCGGAGAAAGGCAAACGCTTGTTGTGCAAACAGATTCGGCTGA-TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC-GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG-GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT-GG-AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC-GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG-AAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG-CCCAAAACAAACCGGCA-CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGCTACCGGAG-GGGGAGCGGGAGCGC-TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG-AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAACGCGCAAAGCGTCCACCCAGCACGCACCGTTGTAGACGGTGAAC-CAAAGCGAAACGTTACAGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCTACCGGTGGCATCCAGCACAGCATCCACACGGGAACCA---CAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTCATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCCCCCATGCTTGCCCGCTGCCCTTGTTGTGAGCATTTGTATTTTGTTGTGTGATTTTTTCTTCTACATTTTCGTTTTGAATTGCCATTTAATAACAGATCATTGCATTTGAATGGGAAAAGGAACAAGCATTATAACAACATAAAGTAGACGCCATAAAGCTAACTATTAGTAGTAACTGAAGGAAAAAAAA]
[+] EMBL BM612020 [ CCGGCTGCGGAGAAAGGCAAACGCTTGTTGTGCAAACAGATTCGGCTGATTTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGTAAGACTGTTCTACAGTCCGCGGCTGTTACTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCCAAACGACCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATCTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAACGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTAGGCATGCAGTGGAAACGGCTACCGGAG GGGGAGC ]
[+] EMBL BM609547 [ CCGGCTGCGGAGAAAGGCAAACGCTTGTTGTGCAAACAGATTCGGCTGA TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTGAAAGGAGCTCGGCCGCCCCAAGC ]
[+] EMBL BM604821 [ ccGCTGCGGAGAAAGGCAAACGCTTGTTGTGCAAACAGATTCGGCTGA TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATGGGGGGGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGA ]
[+] EMBL BM596035 [ccgtcGCTGCGGAGAAAGGCAAACGCTTGTTGTGCAAACAGATTCGGCTGA TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGGTCTGCG CCCAAAACAAACCGGCA CC ]
[+] EMBL CNS09OK1 [ CGCTTGTTGTGCAAACAGATTCGGCTGA TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACTCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAA CTGGG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAACGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAGCGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGCGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTTCCGCTTTGTCTGGGGAAA ]
[+] EMBL BM636651 [ ccgCGCTTGTTGTGCAAACAGATTCGGCTGA TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACA ]
[+] EMBL BX625132 [ CTGA TTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAN AA GGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAG AACCAACCAGTGCT ]
[+] EMBL CNS09E39 [ ctggCATAATTCCGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTACTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCGTCCTGTGGGTTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGACCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATCTCCAAGCTAGCCGCCGTCAAATGAGCAGTCGCTCGACCAAGCCACCAAAGCGAA CT GGAAGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAACGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGCAGCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCGAAGCGCCCTATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGTCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGCTACCGGGA GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTCGCCGCGGAAAATGTGATTGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTAAAGGCGAAGAAAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTAGCAAAGCCGAA ]
[+] EMBL BX619587 [ AGCTCAATGCAGTGGTAAGACTGTTCTACAGTCCGCGGCTGTTACTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCCAAACGACCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATCTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAACGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTANGCATGCAGTGGAAACGGCTACCGGAGNGGGGAG ]
[+] EMBL BX615395 [ TTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCG ]
[+] EMBL BM630666 [ ccgGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCC GGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTG GCAGTCGCTCGACCAAGCCACCAAAGCGAAGCT GG AGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAA ]
[+] EMBL CNS08LTL [ AGGAAGAGTACAAGCGCGA CAGGCGGTGTGGTTGCAGAAGAACGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGC GCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCGCATGCTG AAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAGCGGCTACCGGA GGGGAGCGGGAGCGCTTACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCCGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAACGCGCAAAGCTTCCACCCAGCACGCACCGTTGTAGACGGTGAAC CAAAGCGAAACGTTACAGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCTACCGGTGGCATCCAGCACAGCATCCACACGGGAACCA CAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTCATACTGGCTGCTCGTGTATGCATGTGAACTCCATGCCTCCCATGCTTGCCCGC ]
[+] EMBL CNS08F49 [ AGCGCATGCTG AAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAGCGGCTACCGGA GGGGAGCGGGAG GC TACACTAAAGAGGCGGAAG GGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGaaaaaa ]
[-] EMBL CNS08LTM [ GAAGCGCCCGATGAATGCGGTCCTGCGGTTCTGCGCCCCAAAACAAACCGGCACCCCGCCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAGCGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGAACTGCCGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTTTCTGGGGAAAGCAACGCGCAAAGCGTCCACCCAGCACGCACCGTTGTAGACGGTGAAC CAAAGCGAAACGTTACAGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCTACCGGTGGCATCCAGAACAGCATCCACACGGGAACCA CAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTCATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCTCCCATGCTTGCCCGCTGCCCTTGTTGTGAGCATTTGTATTTTGTTGTGTGATTTTTTCTTCTACATTTTCGTTTTGAATTGCCATTTAATAACAGATCATTGCATTTGAATGGGAAAAGGAACAAGCATTATTACAACATAAAGTAGACGCCATAAAGCTAACTATTAGTAGTA ]
[-] EMBL CNS08F4A [ TGCG CCCAAAACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAGCGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAACGC CAAAGCGTCCACCCAGCACGCACCGTT ]
[-] EMBL CNS09OK2 [ ACAAACCGGCA CCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAGCGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGCGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAACGCGCAAAGCGTCCACCCAGCACGCACCGTTGTAGACGGTGAAC CAAAGCGAAACGTTACAGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAATGATTGAAGCCGCTACCGGTGGCATCCAGCACAGCATCCACACGGGAACCA CAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTCATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCCCCCATGCTTGCCCGCTGCCCTTGTTGTGAGCATTTGTATTTTGTTGTGTGATTTTTTCTTCTACATTTTCGTTTTGAATTGCCATTTAATAACAGATCATTGCATTTGAATGGGAAAAGGAACAAGCATTATAACAACATAAAGTAGACGCCATAAAGCTAACTAT ]
[+] EMBL BX628562 [ GATGAAAAACCTGGGCATGCAGTGGAAACGGCTACCGGAG GGGGAGCGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAACGCGCAAAGCGTCCACCCAGCACGCACCGTTGTAGAAGGTGAAC CAAAGCGAAACGTTACAGCGCCAGACCAAAACCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCCACCGGTGGCACCCAGCACAGCATCCACGCGAGAACCA CAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTCATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCCCCCATGCTTGCCCGCTGCCCTTGTTGTGAGCATTTGTATTTTGTTGTGTGATTTTTTCTTCTACATTTTCGTTTTGAATTGCCATTTAATAACAGATCATTGCATTTGAAT ]
[+] EMBL BM598235 [ ccgGGGAGCGC TACACTAAAGAGGCGGAAGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGCGGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGTGAAGGCGAAG AAGGGTGGCATTCCGGTGGTGGACAGTGCGCCGGTAGCAAAGCCGAAGAAACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAACGCGCAAAGCGTCCACCCAGCACGCACCGTTGTAGACGGTGAAC CAAAGCGAAACGTTACAGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCTACCGGTGGCATCCAGCACAGCATCCACACGGGAACCACAGCAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTCATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCCCCC ]
[-] EMBL CNS09E3A [ CCATAGGAACTCGGGTGTCCCGCTTTTTTTGGGGAAAGCAACGCGCAAAGCGTCCACCCAGTACGCACCGTTGTAGACGGTGAACTCAAAGCGAAACGTTACAGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCTACCGGTGGCATCCAGAACAGCATCCACACGGGAACCA CAGCTGCAGCTGCTGCAGCAG ]
[-] EMBL AGA280661 [ GAACCCGCTACCGGTGGCACCCAGCACAGCATCCACACGGGAACCA CAGCAGCAGCAGCAGCAGCAGCAGGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGATCTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTTATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCCCCCATGCTTGCCCGCTGCCCTTGTTTTGAGCATTTGTATTTTGTTGTGTGATTTTTTCTTCTACATTTTCGTTTTGAATTGCCATTTAATAACAGATCATTGCATTTGAATGGGAAAAGCAACAAGCATTATAACGACATAAAGTAGACGCCATAAAGCTAACTATTAGTAGTAACTGAAGGAAAAAAAA]
consensusID : consensus_9926#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence
[CCGCCCACGCGTCCGCCC-ACGCGTCCGAAACAGATTCGGCTGATTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTGGCAGTCGCTCGACCAAGCCACCAAAGCGAAGCTGGAGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGCGCAACGAGGG-CAAGGTGAAGCGCGAACAGAAGCGCATGCTGAAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCGCCCAAAACAAACCGGCGCCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGC]
[+] EMBL BM581719 [CCGCCCACGCGTCCGCCC ACGCGTCCGAAACAGATTCGGCTGATTTTTTTTGCTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTCGCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTGGCAGTCGCTCGACCAAGCCACCAAAGCGAAGCTGGAGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGCGCAACGAGGG CAAGGTGAAGCGCGAACAGAAGCGCATGCTGAAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCGCCCAAAACAAACCGGCGCCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCTGGGCATGCAGTGGAAACGGC]
[+] EMBL AL930395 [ aagatCGCCCGAGGTGT AAACAGA TCGGCTGA TTTTTTTGNTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAA CGGGGTCACTGTCCTCCGTGCCATCCTGTGGGCTG ACGCAA GGGCACCCTGAACGATGCCGG ACTGGCACCAAATCGGTCCCGGAAAAA CAAAA GCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTCGCTGG CAGCGCCAACCCACAGGCTT CCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTGGGAGTCGCTCGAACAAGCCA CAAAGCGAAGCTGGAGGAAGAGTACAAGCGCGAGCAGGCGGTGTGGTTGCAGAAGAATGGCCAATATCTCAGNCAGCTGACCGATGCGCAGAAGGCGGAAATAAAGCTCGAGCGGCAGCAGCGCAACGAGGGCCAAGGTGAAGCGCGAACAGAAGCGCATGCTGAAGGAGCTCGGGCGGCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCGCCCAAAA AAA CGGCac ]
consensusID : consensus_9926#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 369 fasta sequence
[CCGCCCACGCGTCCGAGAACTTAAACCTGGTTCAAATGAATACGTGTTAAACGATACTGCACCTGCGACGTAGATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTCGCTGGACAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTGGCAGTCGCTCGACC]
[+] EMBL BM608387 [CCGCCCACGCGTCCGAGAACTTAAACCTGGTTCAAATGAATACGTGTTAAACGATACTGCACCTGCGACGTAGATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTTCTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATCCTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCCGGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTCGCTGGACAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAAGTGGCAGTCGCTCGACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9926#0 CCCCGGCTGCGGAGAAAGGCAAACGCTTGTTGTGCAAACAGATTCGGCTGATTTTTTTTG 60
consensus_9926#1 --CCGCCCACGCGTCCGCCCACGCGTCCG------AAACAGATTCGGCTGATTTTTTTTG 52
consensus_9926#2 CCGCCCACGCGTCCGAGAACTTAAACCTG--GTTCAAATGAATACG-----TGTTAAACG 53
* ** * * *** ** ** * ** *
consensus_9926#0 CTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTT 120
consensus_9926#1 CTATTCGCAACTCTTTCTTAAATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTT 112
consensus_9926#2 ATACT-GCACCTGCGACGTAGATTCATAATTATGCAGCTCAATGCAGTGGCAAGACTGTT 112
** * *** ** * ** ***************************************
consensus_9926#0 CTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCTCCGTGCCATC 180
consensus_9926#1 CTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATC 172
consensus_9926#2 CTACAGTCCGCGGCTGTTGCTTTCCACAAGACAACCGGGGTCACTGTCCGCCGTGCCATC 172
************************************************* **********
consensus_9926#0 CTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCC 240
consensus_9926#1 CTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCC 232
consensus_9926#2 CTGTGGGCTGCACGCAACGGCCACCCTGAACGATGCCGGCACTGCCACCAAATCGGTCCC 232
************************************************************
consensus_9926#0 GGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTC 300
consensus_9926#1 GGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTC 292
consensus_9926#2 GGAAAAACCAAAACGCCCGATGAACACTTACATAAGGTTCGCGCAAAGCATCCGGTCCTC 292
************************************************************
consensus_9926#0 GCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAA 360
consensus_9926#1 GCTGGCCAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAA 352
consensus_9926#2 GCTGGACAGCGCCAACCCACAGGCTTCCCCCACGGACATTTCCAAGCTAGCCGCCGTCAA 352
***** ******************************************************
consensus_9926#0 GTGGCAGTCGCTCGACCAAGCCACCAAAGCGAAGCTGGAGGAAGAGTACAAGCGCGAGCA 420
consensus_9926#1 GTGGCAGTCGCTCGACCAAGCCACCAAAGCGAAGCTGGAGGAAGAGTACAAGCGCGAGCA 412
consensus_9926#2 GTGGCAGTCGCTCGACC------------------------------------------- 369
*****************
consensus_9926#0 GGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGC 480
consensus_9926#1 GGCGGTGTGGTTGCAGAAGAATGCCAAATATCTCAGCCAGCTGACCGATGCGCAGAAGGC 472
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 GGAAATAAAGCTCGAGCGGCAGCAGCGCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCG 540
consensus_9926#1 GGAAATAAAGCTCGAGCGGCAGCAGCGCAACGAGGGCAAGGTGAAGCGCGAACAGAAGCG 532
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 CATGCTGAAGGAGCTCGGCCGCCCGAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCGC 600
consensus_9926#1 CATGCTGAAGGAGCTCGGCCGCCCCAAGCGCCCGATGAATGCGTACCTGCGGTTCTGCGC 592
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 CCAAAACAAACCGGCACCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCT 660
consensus_9926#1 CCAAAACAAACCGGCGCCCGGCCTGTCGAAGGAGGACAACAAGATGCAGATGAAAAACCT 652
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 GGGCATGCAGTGGAAACGGCTACCGGAGGGGGAGCGGGAGCGCTACACTAAAGAGGCGGA 720
consensus_9926#1 GGGCATGCAGTGGAAACGGC---------------------------------------- 672
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 AGCGGAAATGAAGCGCTACCAGGAGGAGATGAAGGTGTGGGAAGATAAAATGCTTGCCGC 780
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 GGAAAATGTGATCGCGGTGCGGAAGAAGAACGTACTGCTGCCACCGTCGCCGGCGTCCGT 840
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 GAAGGCGAAGAAGGGTGGCATTCCGGTGGTGGACAGTGCACCGGTTGCAAAGCCGAAGAA 900
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 ACCAACCAGTGCTGCCCGTCCATAGGAACTCGGGTGTCCCGCTTTGTCTGGGGAAAGCAA 960
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 CGCGCAAAGCGTCCACCCAGCACGCACCGTTGTAGACGGTGAACCAAAGCGAAACGTTAC 1020
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 AGCGCCAGACCAAAATCACCTCCAGGCGGGTAGGGACACGAGTGAAGGATTGAAGCCGCT 1080
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 ACCGGTGGCATCCAGCACAGCATCCACACGGGAACCACAGCAGCAGCAGCAGCAGCAGCA 1140
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 GGGGAAGCAGCAGCAAGAAGAGCACCAGCAGAAGGGTATAGTGAACAAGTTGAAATCGAT 1200
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 CTTTAAATTCTGACACTGGTTGCGCTGCATGGAGGACAGGGCATTGCTGTTGGCCGTCTC 1260
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 ATACTGGCTGCTCGTGTATCCATGTTAACTCCATGCCCCCCATGCTTGCCCGCTGCCCTT 1320
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 GTTGTGAGCATTTGTATTTTGTTGTGTGATTTTTTCTTCTACATTTTCGTTTTGAATTGC 1380
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 CATTTAATAACAGATCATTGCATTTGAATGGGAAAAGGAACAAGCATTATAACAACATAA 1440
consensus_9926#1 ------------------------------------------------------------
consensus_9926#2 ------------------------------------------------------------
consensus_9926#0 AGTAGACGCCATAAAGCTAACTATTAGTAGTAACTGAAGGAAAAAAAA 1488
consensus_9926#1 ------------------------------------------------
consensus_9926#2 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||