These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1367#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence [TCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTTACAATTTACGGCTTATGGCTTATGGCTTGCAGCTTACGGCTTACGGCTTACAGTTCACGATTGTGTAGTTCACTAATTTTCGTTTCTCGATTTTGTTAAATTTGTTAAATTCATTTTGTTTTTTTTTCTTATATACCGAATCCTACGTATTATTCTTCGATAACATGTTTTTCCTATTATATTTTTTATCAAATTTATTTCCATTTAAATTTTTTATTATTGATTAATTGTTTATTTTCAATTGGAATATTAAAGAACTGGTGAGTAATTAAAGAATGGCGAGGAATAAGCATAAAAATATTAATATATACATAAAAATATACAATTTTTTTTCGACGACATCGCAATATAGATATAGTGGAAGAATGATAACCATATACATATGTCTAGATTAACGTCTTATCTTAA] [+] EMBL BI514618 [TCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTTACAATTTACGGCTTATGGCTTATGGCTTGCAGCTTACGGCTTACGGCTTACAGTTCACGATTGTGTAGTTCACTAATTTTCGTTTCTCGATTTTGTTAAATTTGTTAAATTCATTTTGTTTTTTTTTCTTATATACCGAATCCTACGTATTATTCTTCGATAACATGTTTTTCCTATTATATTTTTTATCAAATTTATTTCCATTTAAATTTTTTATTATTGATTAATTGTTTATTTTCAATTGGAATATTAAAGAACTGGTGAGTAATTAAAGAATGGCGAGGAATAAGCATAAAAATATTAATATATACATAAAAATATACAATTTTTTTTCGACGACATCGCAATATAGATATAGTGGAAGAATGATAACCATATACATATGTCTAGATTAACGTCTTATCTTAA] consensusID : consensus_1367#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 253 fasta sequence [GCGCCAATGTATCGAAAGCTTGAATGCATTGATGTGTATATGTGACCAGNNNNTTTTCCACCTAGGAGAAAAGTTTAGTCAGTGATGCGACGCGATTGCAGTTAGAAAGAGAAAAATGTGCACGTTTTTCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTCAAACAAAAAAAAAA] [+] EMBL BI506825 [GCGCCAATGTATCGAAAGCTTGAATGCATTGATGTGTATATGTGACCAGNNNNTTTTCCACCTAGGAGAAAAGTTTAGTCAGTGATGCGACGCGATTGCAGTTAGAAAGAGAAAAATGTGCACGTTTTTCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTCAAACAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1367#0 TCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCAT 60 consensus_1367#1 ------------------------------------------------------------ consensus_1367#0 CGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTTACAATTTAC 120 consensus_1367#1 -------------------------------------GCGCCAATGTATCGAAAGCTTGA 23 ** * * ** * * ** consensus_1367#0 GGCTTATGGCTTATGGCTTGCAGCTTACGGCTTACGGCTTACAGTTCACGATTGTGTAGT 180 consensus_1367#1 -----ATGCATTGATGTGTATATGTGAC--CAGNNNNTTTTCCACCTAGGA--GAAAAGT 74 *** ** * * * * ** * ** * * ** * *** consensus_1367#0 TCACTAATTTTCGTTTCTCGATTTTGTTAAATTTGTTAAATTCATTTTGTTTTTTTTTCT 240 consensus_1367#1 TTAGTCAGTGATGCGACGCGATTGCAGTTAGAAAGAGAAA---AATGTGCACGTTTTTCG 131 * * * * * * * ***** * * * *** * * ** ****** consensus_1367#0 TATATACCGAATCCTACGTATTATTCTTCGATAACATGTTTTTCCTATTATATTTTTTAT 300 consensus_1367#1 CATG----AAAGCGAACGTGATATATTTCAAT----TTTTTCTTCGATTAACGAGAATTT 183 ** ** * **** *** *** ** * *** * * **** * * consensus_1367#0 CAAATT-TATTTCCATTTAAATTTTTTATTATTGATTAATTGTTTATTTTCAATTGGAAT 359 consensus_1367#1 CGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTCAAAC 243 * ** * ** *** ***** * * * ***** * **** ** consensus_1367#0 ATTAAAGAACTGGTGAGTAATTAAAGAATGGCGAGGAATAAGCATAAAAATATTAATATA 419 consensus_1367#1 AAAAAAAAAA-------------------------------------------------- 253 * *** ** consensus_1367#0 TACATAAAAATATACAATTTTTTTTCGACGACATCGCAATATAGATATAGTGGAAGAATG 479 consensus_1367#1 ------------------------------------------------------------ consensus_1367#0 ATAACCATATACATATGTCTAGATTAACGTCTTATCTTAA 519 consensus_1367#1 ---------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |