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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1497#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 627 fasta sequence
[CGAATTGCTATCGATCGTTGTTGAAGTTATTTTGGTGTCAAGTACGGGATCAAGATCGATGCATTGACAAAATTACGTCCCTGCAACTGTTCGCTTGTACAGAGAGATATTTACACACGTAAACACATATACATGCCCCGTACGATACGAGTTTCTGCAGTGTACAGACGCATCATACTCTCTCTCCTACTCGACGGGGGGACGACGTCGTGCTCCCTTTTCAACGCCTTCGGCTCTCGAACGACTAGTTGATTTCTCGTGAATTTTCACCTACTATCCCACTTTCCGGATTTAACGGAATTCCTCGTGGAATTAAATAATCGTTCTTCCGCAGCGTGCCGCGCAGGAATAAGACAATAAGAAGGAATAAAGCTACGCGGGATTAGCTGATTATCGCGTTAAATAAAATTGTACATAACGTGATCGTCTCTTTGTCACAGTCTTATCACTCGCTAAAATTCTCTATCGAGCTCCCCGTTTATATTTAACTGAAACGATGATGACTCGTCCTTGGCTGTCGAACGACTATTCGCGGCATCGACAGCACGAATACTTGTAGTATTTGATCCGGCAATAACCATTCTTCACGANNACCGAGCAATCTGGATGCTTGTCAACGCATTCCGA]
[+] EMBL BI506379 [CGAATTGCTATCGATCGTTGTTGAAGTTATTTTGGTGTCAAGTACGGGATCAAGATCGATGCATTGACAAAATTACGTCCCTGCAACTGTTCGCTTGTACAGAGAGATATTTACACACGTAAACACATATACATGCCCCGTACGATACGAGTTTCTGCAGTGTACAGACGCATCATACTCTCTCTCCTACTCGACGGGGGGACGACGTCGTGCTCCCTTTTCAACGCCTTCGGCTCTCGAACGACTAGTTGATTTCTCGTGAATTTTCACCTACTATCCCACTTTCCGGATTTAACGGAATTCCTCGTGGAATTAAATAATCGTTCTTCCGCAGCGTGCCGCGCAGGAATAAGACAATAAGAAGGAATAAAGCTACGCGGGATTAGCTGATTATCGCGTTAAATAAAATTGTACATAACGTGATCGTCTCTTTGTCACAGTCTTATCACTCGCTAAAATTCTCTATCGAGCTCCCCGTTTATATTTAACTGAAACGATGATGACTCGTCCTTGGCTGTCGAACGACTATTCGCGGCATCGACAGCACGAATACTTGTAGTATTTGATCCGGCAATAACCATTCTTCACGANNACCGAGCAATCTGGATGCTTGTCAACGCATTCCGA]
consensusID : consensus_1497#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence
[CGTTGTTGAAGTTATTTTGGTGTCAAGTACGGGATCAAGATCGATGCATTGACAAAATTACGTTCCTGCAACTGTTCGCTTGTACAGAGAGATATTTACACACGTAAACACATATACATGCCCCGTACGATACGAGTTTCTGCAGTGTACAGACGCATCATACTTTCTCTCCTACTCGACGGGGGGACGACGTCGTGCTCCCTTTTCAACGTCTTCGGCTCTCGAACGACTAGTTGATTTCTCGTGAATTTTCACCTACTATCCCACTTTCCGGATTTAACGGAATTCCTCGTGGAATTAAATAATCGTTCTTCCGCAGCGTGCCGCGCGGGAATAAGACAATAAGAAGGAATAAAGCTACGCGGGATTAGCTGATTATCGCGTTAAATAAAATTGTACATAACGTGATCGTCTCTTTGTCACAGTCTTATCACTCGCTAAGATTCTCTATCGAGCTCCCCGTTTATATTTAACTGGAAAGAGGAAAGCAACGAGTTT]
[+] EMBL BI506027 [CGTTGTTGAAGTTATTTTGGTGTCAAGTACGGGATCAAGATCGATGCATTGACAAAATTACGTTCCTGCAACTGTTCGCTTGTACAGAGAGATATTTACACACGTAAACACATATACATGCCCCGTACGATACGAGTTTCTGCAGTGTACAGACGCATCATACTTTCTCTCCTACTCGACGGGGGGACGACGTCGTGCTCCCTTTTCAACGTCTTCGGCTCTCGAACGACTAGTTGATTTCTCGTGAATTTTCACCTACTATCCCACTTTCCGGATTTAACGGAATTCCTCGTGGAATTAAATAATCGTTCTTCCGCAGCGTGCCGCGCGGGAATAAGACAATAAGAAGGAATAAAGCTACGCGGGATTAGCTGATTATCGCGTTAAATAAAATTGTACATAACGTGATCGTCTCTTTGTCACAGTCTTATCACTCGCTAAGATTCTCTATCGAGCTCCCCGTTTATATTTAACTGGAAAGAGGAAAGCAACGAGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1497#0 CGAATTGCTATCGATCGTTGTTGAAGTTATTTTGGTGTCAAGTACGGGATCAAGATCGAT 60
consensus_1497#1 ---------------CGTTGTTGAAGTTATTTTGGTGTCAAGTACGGGATCAAGATCGAT 45
*********************************************
consensus_1497#0 GCATTGACAAAATTACGTCCCTGCAACTGTTCGCTTGTACAGAGAGATATTTACACACGT 120
consensus_1497#1 GCATTGACAAAATTACGTTCCTGCAACTGTTCGCTTGTACAGAGAGATATTTACACACGT 105
****************** *****************************************
consensus_1497#0 AAACACATATACATGCCCCGTACGATACGAGTTTCTGCAGTGTACAGACGCATCATACTC 180
consensus_1497#1 AAACACATATACATGCCCCGTACGATACGAGTTTCTGCAGTGTACAGACGCATCATACTT 165
***********************************************************
consensus_1497#0 TCTCTCCTACTCGACGGGGGGACGACGTCGTGCTCCCTTTTCAACGCCTTCGGCTCTCGA 240
consensus_1497#1 TCTCTCCTACTCGACGGGGGGACGACGTCGTGCTCCCTTTTCAACGTCTTCGGCTCTCGA 225
********************************************** *************
consensus_1497#0 ACGACTAGTTGATTTCTCGTGAATTTTCACCTACTATCCCACTTTCCGGATTTAACGGAA 300
consensus_1497#1 ACGACTAGTTGATTTCTCGTGAATTTTCACCTACTATCCCACTTTCCGGATTTAACGGAA 285
************************************************************
consensus_1497#0 TTCCTCGTGGAATTAAATAATCGTTCTTCCGCAGCGTGCCGCGCAGGAATAAGACAATAA 360
consensus_1497#1 TTCCTCGTGGAATTAAATAATCGTTCTTCCGCAGCGTGCCGCGCGGGAATAAGACAATAA 345
******************************************** ***************
consensus_1497#0 GAAGGAATAAAGCTACGCGGGATTAGCTGATTATCGCGTTAAATAAAATTGTACATAACG 420
consensus_1497#1 GAAGGAATAAAGCTACGCGGGATTAGCTGATTATCGCGTTAAATAAAATTGTACATAACG 405
************************************************************
consensus_1497#0 TGATCGTCTCTTTGTCACAGTCTTATCACTCGCTAAAATTCTCTATCGAGCTCCCCGTTT 480
consensus_1497#1 TGATCGTCTCTTTGTCACAGTCTTATCACTCGCTAAGATTCTCTATCGAGCTCCCCGTTT 465
************************************ ***********************
consensus_1497#0 ATATTTAACTGAAACGATGATGACT-CGTCCTTGGCTGTCGAACGACTATTCGCGGCATC 539
consensus_1497#1 ATATTTAACTGGAAAGAGGAAAGCAACGAGTTT--------------------------- 498
*********** ** ** ** * ** **
consensus_1497#0 GACAGCACGAATACTTGTAGTATTTGATCCGGCAATAACCATTCTTCACGANNACCGAGC 599
consensus_1497#1 ------------------------------------------------------------
consensus_1497#0 AATCTGGATGCTTGTCAACGCATTCCGA 627
consensus_1497#1 ----------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |