These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1655#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 497 fasta sequence [TATAGATTGACGAAATATCTGCTCGATGGATACGACGCCGGTGTACGTCCAGCCGAGAATTCCTCCCAACCCCTGGCGGTCGTCTTTGGCCTTTCTCTTCATCACATAATCGACGTGGACGAGAAGAATCAGATACTGACGACGAATTGCTGGGTGACACAGATTTGGACGGACCATCACCTGAAATGGAACGCCTCGGAGTTCGCGGGGATCCGAGTGATTCGTGTTCCTTACAATCGCGTCTGGAGGCCGGACACGATCCTCTACAACAACGCCGATCCACAGTACAGCTCGGCAGTCATAAATACGAACGTGATAGTGAGTCACACGGGGGAGGTGGTGTGGTTGAGCCATGGGATATTTCGCAGCAGCTGCGACATCGACGTCGAGTTCTTCCCCTTCGACGAGCAACGCTGTGTGTTGAAATGGGCCTCCTGGACGTACGATGGATACCAATTGGAGTTGGAGAAGCAAAGCGAGCAAGGAGACGTGAGCAA] [+] EMBL BI513319 [TATAGATTGACGAAATATCTGCTCGATGGATACGACGCCGGTGTACGTCCAGCCGAGAATTCCTCCCAACCCCTGGCGGTCGTCTTTGGCCTTTCTCTTCATCACATAATCGACGTGGACGAGAAGAATCAGATACTGACGACGAATTGCTGGGTGACACAGATTTGGACGGACCATCACCTGAAATGGAACGCCTCGGAGTTCGCGGGGATCCGAGTGATTCGTGTTCCTTACAATCGCGTCTGGAGGCCGGACACGATCCTCTACAACAACGCCGATCCACAGTACAGCTCGGCAGTCATAAATACGAACGTGATAGTGAGTCACACGGGGGAGGTGGTGTGGTTGAGCCATGGGATATTTCGCAGCAGCTGCGACATCGACGTCGAGTTCTTCCCCTTCGACGAGCAACGCTGTGTGTTGAAATGGGCCTCCTGGACGTACGATGGATACCAATTGGAGTTGGAGAAGCAAAGCGAGCAAGGAGACGTGAGCAA] consensusID : consensus_1655#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 420 fasta sequence [TGTACGTCCAGCCGAGAATTCCTCCCAACCCCTGGCGGTCGTCTTTGGCCTTTCTCTTCATCACATAATCGACGTGGACGAGAAGAATCAGATACTGACGACGAATTGCTGGGTGACACAGATTTGGACGGACCATCACCTGAAATGGAACGCCTCGGAGTTCGCGGGGATCCGAGTGATTCGTGTTCCTTACAATCGCGTCTGGAGGCCGGACACGATCCTCTACAACAAGTAAGCGATGATTGTTTCGATAGAAAAGAGAAATTGTTGGAATATTGGCATCGTCGAAACGAGAATGGTAAAGGAGAGCTCGATATTTTCGGGTTACGTTCTATCATCAGGATAGAAGTTTCGATATCGATTACACCAGCGTTTCTTCCATGATCGGTTTTGTTCGTAGCGCCGATCCACAGTACAGCT] [+] EMBL BI511141 [TGTACGTCCAGCCGAGAATTCCTCCCAACCCCTGGCGGTCGTCTTTGGCCTTTCTCTTCATCACATAATCGACGTGGACGAGAAGAATCAGATACTGACGACGAATTGCTGGGTGACACAGATTTGGACGGACCATCACCTGAAATGGAACGCCTCGGAGTTCGCGGGGATCCGAGTGATTCGTGTTCCTTACAATCGCGTCTGGAGGCCGGACACGATCCTCTACAACAAGTAAGCGATGATTGTTTCGATAGAAAAGAGAAATTGTTGGAATATTGGCATCGTCGAAACGAGAATGGTAAAGGAGAGCTCGATATTTTCGGGTTACGTTCTATCATCAGGATAGAAGTTTCGATATCGATTACACCAGCGTTTCTTCCATGATCGGTTTTGTTCGTAGCGCCGATCCACAGTACAGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1655#0 TATAGATTGACGAAATATCTGCTCGATGGATACGACGCCGGTGTACGTCCAGCCGAGAAT 60 consensus_1655#1 -----------------------------------------TGTACGTCCAGCCGAGAAT 19 ******************* consensus_1655#0 TCCTCCCAACCCCTGGCGGTCGTCTTTGGCCTTTCTCTTCATCACATAATCGACGTGGAC 120 consensus_1655#1 TCCTCCCAACCCCTGGCGGTCGTCTTTGGCCTTTCTCTTCATCACATAATCGACGTGGAC 79 ************************************************************ consensus_1655#0 GAGAAGAATCAGATACTGACGACGAATTGCTGGGTGACACAGATTTGGACGGACCATCAC 180 consensus_1655#1 GAGAAGAATCAGATACTGACGACGAATTGCTGGGTGACACAGATTTGGACGGACCATCAC 139 ************************************************************ consensus_1655#0 CTGAAATGGAACGCCTCGGAGTTCGCGGGGATCCGAGTGATTCGTGTTCCTTACAATCGC 240 consensus_1655#1 CTGAAATGGAACGCCTCGGAGTTCGCGGGGATCCGAGTGATTCGTGTTCCTTACAATCGC 199 ************************************************************ consensus_1655#0 GTCTGGAGGCCGGACACGATCCTCTACAACAACGCCGATCCACAGTACAGCTCGGCAGTC 300 consensus_1655#1 GTCTGGAGGCCGGACACGATCCTCTACAACAAG--TAAGCGATGAT-TGTTTCGATAGAA 256 ******************************** * * * * *** ** consensus_1655#0 ATAA-ATACGAACGTGATAGTGA-GTCACACGGGGGAGG-TGGTGTGGTTGAGCCATGGG 357 consensus_1655#1 AAGAGAAATTGTTGGAATATTGGCATCGTCGAAACGAGAATGGTAAAGGAGAGCT-CGAT 315 * * * * * *** ** ** *** **** * **** * consensus_1655#0 ATATTTCGCAGCAGCTGCGACATCGACGTCGAGTTCTTCCCCTTCGACGAGCAACGCTGT 417 consensus_1655#1 ATTTTCGGGTTACGTTCTATCATCAGGATAGAAGT-TTCGATATCGATTA-CACCAGCGT 373 ** ** * * * **** * ** * *** **** * ** * ** consensus_1655#0 GTGTTGAAATGGGCCTCCTGGACGTACGATGGATACCAATTGGAGTTGGAGAAGCAAAGC 477 consensus_1655#1 TTCTTCCATGATCGGTTTTGTTCGTAGCGCCGATCCACAGTACAGCT------------- 420 * ** * * ** **** *** * * * ** * consensus_1655#0 GAGCAAGGAGACGTGAGCAA 497 consensus_1655#1 -------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |