These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_166#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 742 fasta sequence [CGAAACGAGAGTTCGCGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCATATTCACAGATCAGAATT--------GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACACCGCGCCGAACAGTAGACTGAGGCTGTAACCGAAGGGCACTTGACACCAGGCCAATCCTTTGGTAAACATCAATTCAGCGGTCCCGTTTATGTAGGCGCCACCGACCCACGTGGCGATCAAAGTGAAGACGCCAAGAATCGGACCTAAGCCACGGTTAGCAAGTATCAAAGCGTCATGGCCATGGCGGGAT] [+] EMBL BI508323 [CGAAACGAGAGTTCGCGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCATATTCACAGATCAGAATT GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCAT ] [+] EMBL BI507950 [ CGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCGTATTCACAAATCAGAATTATCTTGACGAATATAATATTCGATATACCTGCCAGGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCGGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTG ] [+] EMBL BI503332 [ ACGCGATTCATATTCACAGATCAGAATT GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCGCCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACAC ] [+] EMBL BI508286 [ ATTCATATTCACAGATCAGAATT GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACAC ] [+] EMBL BI506529 [ GACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACACCGCGCCGAACAGTAGACTGAGGCTGTAACCGAAGGGCACTTGACACCAGGCCAATCCTTTGGTAAACATCAATTCAGCGGTCCCGTTTATGTAGGCGCCACCGACCCACGTGGCGATCAAAGTGAAGACGCCAAGAATCGGACCTAAGCCACGGTTAGCAAGTATCAAAGCGTCATGGCCATGGCGGGAT] consensusID : consensus_166#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence [TGCCGCGGAAATAGCGCCCAGACCGACAAAGGAGACCCACTGCGGTGTCAAGTATCGGAGAACGATCGGTAATGCTGCATTCGCTTCGTGCGTTATTATACTTTTGTTAAATCCCTGCACGGTTGACCAATCGGTGGCACGTGCCACCACGCCAATTAGAGCTGATGGAAACGCGAGGATCATGCAACCGAACATCGATGTTATCGACAAAGCGGTCGCCATCGATGTGCTTCGCATACTTAGGATCCTTTGAAAGTAGCCCTGCCAGGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATT] [+] EMBL BI503188 [TGCCGCGGAAATAGCGCCCAGACCGACAAAGGAGACCCACTGCGGTGTCAAGTATCGGAGAACGATCGGTAATGCTGCATTCGCTTCGTGCGTTATTATACTTTTGTTAAATCCCTGCACGGTTGACCAATCGGTGGCACGTGCCACCACGCCAATTAGAGCTGATGGAAACGCGAGGATCATGCAACCGAACATCGATGTTATCGACAAAGCGGTCGCCATCGATGTGCTTCGCATACTTAGGATCCTTTGAAAGTAGCCCTGCCAGGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_166#0 ------------------------------------------------------------ consensus_166#1 TGCCGCGGAAATAGCGCCCAGACCGACAAAGGAGACCCACTGCGGTGTCAAGTATCGGAG 60 consensus_166#0 ------------------------------------------------------------ consensus_166#1 AACGATCGGTAATGCTGCATTCGCTTCGTGCGTTATTATACTTTTGTTAAATCCCTGCAC 120 consensus_166#0 ----------------------------------------------CGAAACGAGAGT-T 13 consensus_166#1 GGTTGACCAATCGGTGGCACGTGCCACCACGCCAATTAGAGCTGATGGAAACGCGAGGAT 180 ****** *** * consensus_166#0 CGCGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCATATTCACAGATC 73 consensus_166#1 CATGCA-ACCGAACATCGAT--GTTATCGACAAAGCGGTCGCCATCGATGTGCTTCG--C 235 * ** * *** *** ** *** * *** ** ** * * * * consensus_166#0 AGAATTGAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGC 133 consensus_166#1 ATACTTAGGATCCTTTGAAAGTAGCCCTGCCAGGGTATACCGCCAAATACCAACAACAGC 295 * * ** * ** ******* *************************** consensus_166#0 ATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGC 193 consensus_166#1 ATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGC 355 ******************** ******************** ****************** consensus_166#0 GTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCC 253 consensus_166#1 GTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCC 415 ************************************************************ consensus_166#0 AACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCA 313 consensus_166#1 AACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCA 475 ************************************************************ consensus_166#0 CCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTC 373 consensus_166#1 CCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATT- 534 *********************************************************** consensus_166#0 ACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAAC 433 consensus_166#1 ------------------------------------------------------------ consensus_166#0 AGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCT 493 consensus_166#1 ------------------------------------------------------------ consensus_166#0 TGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACACC 553 consensus_166#1 ------------------------------------------------------------ consensus_166#0 GCGCCGAACAGTAGACTGAGGCTGTAACCGAAGGGCACTTGACACCAGGCCAATCCTTTG 613 consensus_166#1 ------------------------------------------------------------ consensus_166#0 GTAAACATCAATTCAGCGGTCCCGTTTATGTAGGCGCCACCGACCCACGTGGCGATCAAA 673 consensus_166#1 ------------------------------------------------------------ consensus_166#0 GTGAAGACGCCAAGAATCGGACCTAAGCCACGGTTAGCAAGTATCAAAGCGTCATGGCCA 733 consensus_166#1 ------------------------------------------------------------ consensus_166#0 TGGCGGGAT 742 consensus_166#1 --------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |