These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1721#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 579 fasta sequence [AAAAAAACTCGGTGCTTTCGAAGATTTCTCGAACACTGTGTACATTTTACCGTAGCTGTTAAGATATCTGCGAATGTGATTCGCATTTTATGAGCTTCTTTGAAGAGAAATGCACCACCGAATTACTTCCAACTATACGTTTGTATGTTGGACGAGAGCATAATAAAATGATAAGTTTAATTGTTTAATTAAAAACCATTATATTATCACTTTGATTAAGTATTTTTACGAACTTCACGTACGCCCTTAAATATTTTTTACGTTAATTTTATGCCCATTTTTTTTTTATGTATATACATATATATATATATATATATATATATATATATATATATTTATGTTCCGTTGTGAATATATTGATGTTAATAAATGATAATTGCTGGATTATTATCATCATCAAAGGAATTTTCAAAGGATTAATGTCGAAAGATAATAAGAAATTTGTGTAATATTGGCGNTGTATAGCTCTTCGTAGATTGCCAAAGAACGATAGAAAAATATGTAACTGAATTCCGTTCCTCTGTTCTTCCAAATCGAGAAAAAGAATCGAGAGAAAGAATATTACTGTGCACGATGAGG] [+] EMBL BI505259 [AAAAAAACTCGGTGCTTTCGAAGATTTCTCGAACACTGTGTACATTTTACCGTAGCTGTTAAGATATCTGCGAATGTGATTCGCATTTTATGAGCTTCTTTGAAGAGAAATGCACCACCGAATTACTTCCAACTATACGTTTGTATGTTGGACGAGAGCATAATAAAATGATAAGTTTAATTGTTTAATTAAAAACCATTATATTATCACTTTGATTAAGTATTTTTACGAACTTCACGTACGCCCTTAAATATTTTTTACGTTAATTTTATGCCCATTTTTTTTTTATGTATATACATATATATATATATATATATATATATATATATATATATTTATGTTCCGTTGTGAATATATTGATGTTAATAAATGATAATTGCTGGATTATTATCATCATCAAAGGAATTTTCAAAGGATTAATGTCGAAAGATAATAAGAAATTTGTGTAATATTGGCGNTGTATAGCTCTTCGTAGATTGCCAAAGAACGATAGAAAAATATGTAACTGAATTCCGTTCCTCTGTTCTTCCAAATCGAGAAAAAGAATCGAGAGAAAGAATATTACTGTGCACGATGAGG] consensusID : consensus_1721#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 439 fasta sequence [AAAAAAACTCGGTGCTTTCGAAGATTTCTCGAACACTGTGTACATTTTACCGTAGCTGTTAAGATATCTGCGAATGTGATTCGCATTTTATGAGCTTCTTTGAAGAGAAATGCGCCACCGAATTACTTCCAACTATACGTTTGTATGTTGGACGAGAGCATAATAAAATGATAAGTTTAATTGTTTAATTAAAAACCATTATATTATCACTTTGATTAAGTATTTTTACGAACTTCACGTACGCCCTTAAATATTTTTTACGTTAATTTTATGCCCATTTTTTTTTTATGTATATACATATATATATATATATTTATGTTCCGTTGTGAATATATTGATGTTAATAAATGATAATGCTGGATTATTATCATCATCAAAGGAATTTTCACGATTAATGTCGAAAGATTATATAAAAAATTTGTGTAATATTGGCGGTGTA] [+] EMBL BI510043 [AAAAAAACTCGGTGCTTTCGAAGATTTCTCGAACACTGTGTACATTTTACCGTAGCTGTTAAGATATCTGCGAATGTGATTCGCATTTTATGAGCTTCTTTGAAGAGAAATGCGCCACCGAATTACTTCCAACTATACGTTTGTATGTTGGACGAGAGCATAATAAAATGATAAGTTTAATTGTTTAATTAAAAACCATTATATTATCACTTTGATTAAGTATTTTTACGAACTTCACGTACGCCCTTAAATATTTTTTACGTTAATTTTATGCCCATTTTTTTTTTATGTATATACATATATATATATATATTTATGTTCCGTTGTGAATATATTGATGTTAATAAATGATAATGCTGGATTATTATCATCATCAAAGGAATTTTCACGATTAATGTCGAAAGATTATATAAAAAATTTGTGTAATATTGGCGGTGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1721#0 AAAAAAACTCGGTGCTTTCGAAGATTTCTCGAACACTGTGTACATTTTACCGTAGCTGTT 60 consensus_1721#1 AAAAAAACTCGGTGCTTTCGAAGATTTCTCGAACACTGTGTACATTTTACCGTAGCTGTT 60 ************************************************************ consensus_1721#0 AAGATATCTGCGAATGTGATTCGCATTTTATGAGCTTCTTTGAAGAGAAATGCACCACCG 120 consensus_1721#1 AAGATATCTGCGAATGTGATTCGCATTTTATGAGCTTCTTTGAAGAGAAATGCGCCACCG 120 ***************************************************** ****** consensus_1721#0 AATTACTTCCAACTATACGTTTGTATGTTGGACGAGAGCATAATAAAATGATAAGTTTAA 180 consensus_1721#1 AATTACTTCCAACTATACGTTTGTATGTTGGACGAGAGCATAATAAAATGATAAGTTTAA 180 ************************************************************ consensus_1721#0 TTGTTTAATTAAAAACCATTATATTATCACTTTGATTAAGTATTTTTACGAACTTCACGT 240 consensus_1721#1 TTGTTTAATTAAAAACCATTATATTATCACTTTGATTAAGTATTTTTACGAACTTCACGT 240 ************************************************************ consensus_1721#0 ACGCCCTTAAATATTTTTTACGTTAATTTTATGCCCATTTTTTTTTTATGTATATACATA 300 consensus_1721#1 ACGCCCTTAAATATTTTTTACGTTAATTTTATGCCCATTTTTTTTTTATGTATATACATA 300 ************************************************************ consensus_1721#0 TATATATATATATATATATATATATATATATATATTTATGTTCCGTTGTGAATATATTGA 360 consensus_1721#1 TAT----------------------ATATATATATTTATGTTCCGTTGTGAATATATTGA 338 *** *********************************** consensus_1721#0 TGTTAATAAATGATAATTGCTGGATTATTATCATCATCAAAGGAATTTTCAAAGGATTAA 420 consensus_1721#1 TGTTAATAAATGATAAT-GCTGGATTATTATCATCATCAAAGGAATTTTCAC--GATTAA 395 ***************** ********************************* ****** consensus_1721#0 TGTCGAAAGATAATA--AGAAATTTGTGTAATATTGGCGNTGTATAGCTCTTCGTAGATT 478 consensus_1721#1 TGTCGAAAGATTATATAAAAAATTTGTGTAATATTGGCGGTGTA---------------- 439 *********** *** * ******************** **** consensus_1721#0 GCCAAAGAACGATAGAAAAATATGTAACTGAATTCCGTTCCTCTGTTCTTCCAAATCGAG 538 consensus_1721#1 ------------------------------------------------------------ consensus_1721#0 AAAAAGAATCGAGAGAAAGAATATTACTGTGCACGATGAGG 579 consensus_1721#1 ----------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |