These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1868#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence [CTCAATGTCAATCATTGGATTCTTTTTAAATAATAATATATGATCGACATTGATTCGTATTTTTAATTCCGTTTAGACTGAGGATTTTTTTTTTTTTTTTTTTTTTATACACAGGAATCATTTGTTGCTCGAGTCGTTTCAACCGAAGATCGTTTGTGGCTGCATCTCGCTTCCGGGTCCTCCACACGGCGAGAACCGACCCGACAGTCTTTGGGTTTCATTGATGAGAACCGCGATGAACCGTGCAGCTTTCATAGAGAGAGAATGAGCGGGAGAAAATGTACGAAAGAATGGAGAGGAAAAAAAAAAAAAGGAAAAGGAAAAGAAAAGAAGGGGGGAAGAACTGTCGAGAAAATCGAGATCGCCACGGTGTATCGATGTTCGAATTCCTTTCTCTTTTCGTGTGCGTAATTTAATAACGGTTGGACGGAAATTGGACGAAATTCACGGGATGATAAAGAGGATAATAATAATAATAATAATAAAAA] [+] EMBL BI509012 [CTCAATGTCAATCATTGGATTCTTTTTAAATAATAATATATGATCGACATTGATTCGTATTTTTAATTCCGTTTAGACTGAGGATTTTTTTTTTTTTTTTTTTTTTATACACAGGAATCATTTGTTGCTCGAGTCGTTTCAACCGAAGATCGTTTGTGGCTGCATCTCGCTTCCGGGTCCTCCACACGGCGAGAACCGACCCGACAGTCTTTGGGTTTCATTGATGAGAACCGCGATGAACCGTGCAGCTTTCATAGAGAGAGAATGAGCGGGAGAAAATGTACGAAAGAATGGAGAGGAAAAAAAAAAAAAGGAAAAGGAAAAGAAAAGAAGGGGGGAAGAACTGTCGAGAAAATCGAGATCGCCACGGTGTATCGATGTTCGAATTCCTTTCTCTTTTCGTGTGCGTAATTTAATAACGGTTGGACGGAAATTGGACGAAATTCACGGGATGATAAAGAGGATAATAATAATAATAATAATAAAAA] consensusID : consensus_1868#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 345 fasta sequence [CTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTCTCGATAATTTTTTTTTTTTTTTAATAATTTTTTCACATAAAAAGTTCTTGGGTTCGATACATTTTTCTGTTCGTTTAACGCTCCCTCGTCGTCAGTGAGCCGAAAACGTGTTTCTTTCTAGTCGTTTCAACCGAAAATTGTTTGGGGCTGCATCTCGCTTCCGGGTCCTCCACACGGNNAGAACCGACCCGACAGTCTTTGGGTTTCATTGATGAAAACCGCGATGAACCGTGCAGCTTTCATAGAGAGAGAATGAGCGGGAGAAAATGTACGAAAGAATGGAGAGGAAAAAAAAAAAAGGGAAAAGGAAAA] [+] EMBL BI514719 [CTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTCTCGATAATTTTTTTTTTTTTTTAATAATTTTTTCACATAAAAAGTTCTTGGGTTCGATACATTTTTCTGTTCGTTTAACGCTCCCTCGTCGTCAGTGAGCCGAAAACGTGTTTCTTTCTAGTCGTTTCAACCGAAAATTGTTTGGGGCTGCATCTCGCTTCCGGGTCCTCCACACGGNNAGAACCGACCCGACAGTCTTTGGGTTTCATTGATGAAAACCGCGATGAACCGTGCAGCTTTCATAGAGAGAGAATGAGCGGGAGAAAATGTACGAAAGAATGGAGAGGAAAAAAAAAAAAGGGAAAAGGAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1868#0 --------------------------CTCAATGTCAATCATTGGATTCTTTTTAAATAAT 34 consensus_1868#1 CTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTCTCGATAATT--TTTTTTTTTTTTTAAT 58 * * ** ** *** ** ***** **** consensus_1868#0 AATATATGATCGACATTGATTCGTATTTTTAATTCCGTTTAGACTGAGGATTTTTTTTTT 94 consensus_1868#1 AATTTTTTCACATAAAAAGTTCTTGGGTTCGATACATTTTTCTGTTCG---TTTAACGCT 115 *** * * * * *** * ** ** * *** * * *** * consensus_1868#0 TTTTTTTTTTTTATACACAGGAATCATTTGTTGCTCGAGTCGTTTCAACCGAAGATCGTT 154 consensus_1868#1 CCCTCGTCGTCAGTGAGCCGAAAACGTGTTTCTTTCTAGTCGTTTCAACCGAAAATTGTT 175 * * * * * * ** * * * * ** **************** ** *** consensus_1868#0 TGTGGCTGCATCTCGCTTCCGGGTCCTCCACACGGCGAGAACCGACCCGACAGTCTTTGG 214 consensus_1868#1 TGGGGCTGCATCTCGCTTCCGGGTCCTCCACACGGNNAGAACCGACCCGACAGTCTTTGG 235 ** ******************************** *********************** consensus_1868#0 GTTTCATTGATGAGAACCGCGATGAACCGTGCAGCTTTCATAGAGAGAGAATGAGCGGGA 274 consensus_1868#1 GTTTCATTGATGAAAACCGCGATGAACCGTGCAGCTTTCATAGAGAGAGAATGAGCGGGA 295 ************* ********************************************** consensus_1868#0 GAAAATGTACGAAAGAATGGAGAGGAAAAAAAAAAAAAGGAAAAGGAAAAGAAAAGAAGG 334 consensus_1868#1 GAAAATGTACGAAAGAATGGAGAGGAAAAAAAAAAAAGGGAAAAGGAAAA---------- 345 ************************************* ************ consensus_1868#0 GGGGAAGAACTGTCGAGAAAATCGAGATCGCCACGGTGTATCGATGTTCGAATTCCTTTC 394 consensus_1868#1 ------------------------------------------------------------ consensus_1868#0 TCTTTTCGTGTGCGTAATTTAATAACGGTTGGACGGAAATTGGACGAAATTCACGGGATG 454 consensus_1868#1 ------------------------------------------------------------ consensus_1868#0 ATAAAGAGGATAATAATAATAATAATAATAAAAA 488 consensus_1868#1 ---------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |