These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2273#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [TAATCATTAATATATATTTTTTTTAATAGTTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAGTAAAGAAAATTTCAAATACGCTGGCGTATGTTTCTTGTTAGTTGCATAAATGATTTGCACCAGATCTCTAGTTAAGCAATTGTTCAGAGTATAGTATAATTTTAAATAATGTACAGTCACATTCTCTATGTTAATAACATCATCGTTGTCATTTTCAATCTTCCATATTCAAAGAGTTTTTACATATATTTTTATTCATATTTTTAAAGTTATTGCATATATAAATTGTTATCGTGAAAATATTCTAATTGAAAGCATTTCATTATTCACTTTGAATCATATAGTGATATTTAAGAAAGAAATAAAGTTATAAATTGTATTTTTATGAAAAAATCTTTNNNAAATATAATTCCTAAAAGGAATTGATATTGATTTTATCATATATCTTTGAATGTTTGTA] [+] EMBL BI513336 [TAATCATTAATATATATTTTTTTTAATAGTTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAGTAAAGAAAATTTCAAATACGCTGGCGTATGTTTCTTGTTAGTTGCATAAATGATTTGCACCAGATCTCTAGTTAAGCAATTGTTCAGAGTATAGTATAATTTTAAATAATGTACAGTCACATTCTCTATGTTAATAACATCATCGTTGTCATTTTCAATCTTCCATATTCAAAGAGTTTTTACATATATTTTTATTCATATTTTTAAAGTTATTGCATATATAAATTGTTATCGTGAAAATATTCTAATTGAAAGCATTTCATTATTCACTTTGAATCATATAGTGATATTTAAGAAAGAAATAAAGTTATAAATTGTATTTTTATGAAAAAATCTTTNNNAAATATAATTCCTAAAAGGAATTGATATTGATTTTATCATATATCTTTGAATGTTTGTA] consensusID : consensus_2273#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 286 fasta sequence [AATTGTACAATATGTTTGCGAAGTAGTTTCTAATCGCGCAGCTCTTCTTGTTTCAATATGCCTAGCAGTTTTATTAAAGCGAATTGACAGAAAACATGTAACAATCGCTGTAGATGGATCTCTATACAAGCATCATCCTCGACTAGAGACATGGATCAAACAGTACATTCCATTATTAGCTCCTGATCACAAATTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAG] [+] EMBL BI511560 [AATTGTACAATATGTTTGCGAAGTAGTTTCTAATCGCGCAGCTCTTCTTGTTTCAATATGCCTAGCAGTTTTATTAAAGCGAATTGACAGAAAACATGTAACAATCGCTGTAGATGGATCTCTATACAAGCATCATCCTCGACTAGAGACATGGATCAAACAGTACATTCCATTATTAGCTCCTGATCACAAATTCAAGATGATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAATAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2273#0 TAATCATTAATATATATTTTTTTTAATAGTTCAAGATGATCCATGCTGAGGATGGAAGTG 60 consensus_2273#1 ------------------------------------------------------------ consensus_2273#0 GGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAAAGACTTCAGAATAGATTAGATTAAT 120 consensus_2273#1 ------------------------------------------------------------ consensus_2273#0 AGTAAAGAAAATTTCAAATACGCTGGCGTATGTTTCTTGTTAGTTGCATAAATGATTTGC 180 consensus_2273#1 ------------------------------------------------------------ consensus_2273#0 ACCAGATCTCTAGTTAAGCAATTGTTCAGAGTATAGTATAATTTTAAA-TAATGTACAGT 239 consensus_2273#1 --------------------------AATTGTACAATATGTTTGCGAAGTAGTTTCTAAT 34 * *** * *** ** ** ** * * * * consensus_2273#0 CACATTCTCTATGTTAATAACATCATCGTTGTCATTTTCAATCTTCCATATTCAAAGAGT 299 consensus_2273#1 CGCGCAG-CTCTTCTTGTTTCAATATGCCTAGCAGTTTTATTAAAGCGAATTGACAGAAA 93 * * ** * * * ** ** * ** *** * * * *** * *** consensus_2273#0 TTTTACATATATTTTTATTCATATTTTTAAAGTTATTGCATATATAAATTGTTATCGTGA 359 consensus_2273#1 ACATGTAACAATCGCTGTAGATGGATCTCTA-----TACAAGCATCATCCTCGACTAGAG 148 * * ** * * ** * * * * ** ** * * consensus_2273#0 AAATATTCTAATTGAAAGCATTTCATTATTCACTTTGAATCATATAGTGATATTTAAGAA 419 consensus_2273#1 ACATGGATCAAAC-AGTACATTCCATTATTAGCTCCTGATCACAAA------TTCAAGAT 201 * ** ** * **** ******* ** **** * * ** **** consensus_2273#0 AGAAATAAAGTTATAAATTGTATTTTTATGAAAAAATCTTTNNNAAATATAATTCCTAAA 479 consensus_2273#1 --GATCCATGCTGAGGATGGAAGTGGGAAAGGTGCTGCACTTGTTGCTGCAATTGCACAA 259 * * * * ** * * * * * * * **** * ** consensus_2273#0 AGGAATTGATATTGATTTTATCATATATCTTTGAATGTTTGTA 522 consensus_2273#1 AGACTTCAGAATAGATTAGATTA-ATAG--------------- 286 ** * ** **** ** * *** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |