These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2418#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence [AGAACGCAATATATCGCGTTATCGTCGTCGTTTCGAGGCTTCTTTCACTCGATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACACACACTTATACTCACACATACACATACATACACGCGCTTAGAAATATACGTTCCAGGAGCATCTCCGCCGAAGAAAAGTAGGTACATAACGGGCGTACATAACGTTATCATACGTCGAGGCCAAACCGTGTCTCGTGCCAATCAGAATTGGCGATTCCAGCTCATGGCATTCGAATGCCGATTTAGTGCCTCGTTGCTTTCCCTTCCCACTTACCTTTTTTAATTTCAAATTTCGTTTCATTCAAATCTCTATAAAATATACACGATATATTTATAGAGATTTGAATGAAAAAAAAAAA] [+] EMBL BI503355 [AGAACGCAATATATCGCGTTATCGTCGTCGTTTCGAGGCTTCTTTCACTCGATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACACACACTTATACTCACACATACACATACATACACGCGCTTAGAAATATACGTTCCAGGAGCATCTCCGCCGAAGAAAAGTAGGTACATAACGGGCGTACATAACGTTATCATACGTCGAGGCCAAACCGTGTCTCGTGCCAATCAGAATTGGCGATTCCAGCTCATGGCATTCGAATGCCGATTTAGTGCCTCGTTGCTTTCCCTTCCCACTTACCTTTTTTAATTTCAAATTTCGTTTCATTCAAATCTCTATAAAATATACACGATATATTTATAGAGATTTGAATGAAAAAAAAAAA] consensusID : consensus_2418#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 382 fasta sequence [GATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACATACACACAGACACACAGAGATAGAAACAGTGAAGAAAGAAAAAGAATGAAAAAGAAAGAAAAAAAAGAAGTAACGTGTGAGTGTAAGTGGAGAGATAATAAAATATAAATGTAAAACCTCATTTTCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTATCTCTGTTCTCGGCGAACAACACGAGAGAGAGAGGGAGAGAGAGAGAAAGAAAGAAAAAATATCGGAGAAAGGAAGAAAAATGCAATTGTGCAATTTTACACATACACGTACACGTACTTTGTACAGAAATAATATACA] [+] EMBL BI516938 [GATCCAAAATCAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAATAGATTAGAATACACACATACACACAGACACACAGAGATAGAAACAGTGAAGAAAGAAAAAGAATGAAAAAGAAAGAAAAAAAAGAAGTAACGTGTGAGTGTAAGTGGAGAGATAATAAAATATAAATGTAAAACCTCATTTTCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTATCTCTGTTCTCGGCGAACAACACGAGAGAGAGAGGGAGAGAGAGAGAAAGAAAGAAAAAATATCGGAGAAAGGAAGAAAAATGCAATTGTGCAATTTTACACATACACGTACACGTACTTTGTACAGAAATAATATACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2418#0 AGAACGCAATATATCGCGTTATCGTCGTCGTTTCGAGGCTTCTTTCACTCGATCCAAAAT 60 consensus_2418#1 --------------------------------------------------GATCCAAAAT 10 ********** consensus_2418#0 CAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAAT 120 consensus_2418#1 CAATCTCGATTCGAAAGAATCGATGCGTGATGAAGCTTCGAAACGCATTCGATCGTGAAT 70 ************************************************************ consensus_2418#0 AGATTAGAATACACACACACACTTATACTCACACATACACATACATACACGCGCTTAGAA 180 consensus_2418#1 AGATTAGAATACACACATACACACAGACACACAGAGATAGAAACA---GTGAAGAAAGAA 127 ***************** **** * ** **** * * * * *** * **** consensus_2418#0 ATATACGTTCCAGGAGCATCTCCGCCGAAGAAAAGTAGGTACATAACGGGCGTACATAAC 240 consensus_2418#1 AAAGAATGAAAAAGAAAGAAAAAAAAGAAGTAACGTGTGAGTGTAAGTGGAG-AGATAAT 186 * * * * ** **** ** ** * *** ** * * **** consensus_2418#0 GTTATCATACGTCGAGGCCAAACCGTGTCTCGTGCCAATCAGAATTGGCGATTCCAGCTC 300 consensus_2418#1 AAAATATAAATGTAAAACCTCATTTTCTCTC-TCTCCCTCTCTCTCTCCCTCTCTCTATC 245 ** * * ** * * **** * * ** * * ** ** consensus_2418#0 ATGGCATTCGAATGCCGATTTAGTGCCTCGTTGCTTTCCCTTCCCACTTACCTTTTTTAA 360 consensus_2418#1 TCTGTTCTCGGCGAACAACACGAGAGAGAGAGGGAGAGAGAGAGAAAGAAAGAAA--AAA 303 * *** * * * * * * ** consensus_2418#0 TTTCAAATTTCGTTTCATTCAAATCTCTATAAAATAT-ACACGATATATTTATAGAGA-T 418 consensus_2418#1 TATCGGAGAAAGGAAGAAAAATGCAATTGTGCAATTTTACAC-ATACACGTACACGTACT 362 * ** * * * * * * *** * **** *** * ** * * * consensus_2418#0 TTGAATGAAAAAAAAAAA-- 436 consensus_2418#1 TTGTACAGAAATAATATACA 382 *** * *** ** * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |