These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2662#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence [AGAAATATATAAATAATTATTATGAATAAAATATATTTTTTACATATATTTATATATTTTTTTATATAATAATTTTAAAATGATATTCATTGGTTCATATTAAATTCATTTTATAGGAGAAGCAATAATATGTTACAAATGCAACAGCGAATACGATCCAAGGTGCGGCGATCCATTCGATCCGTACAGTCTTGGAACCGTGAATTGCAGTTTTCAACCACGCTTGGAGCATCTAAGTCATTTGGAGCCTACTCTTTGTCGAAAAATCAGCCAAAGAGGTATATCCAAAAAAATTATTTATTGTGTGTATAATATAGTTTTCGAAAATTATTTAATAAATTTTGTATCTGAAATATACAATAAATTATTCAAACTATTCATGAATTTTAACTATTGTTAAAATCAATATTATTGGCATCTGTTATTGAGTAAACATTACATTAACATTGTGATAATTAAATTTCAAAAGATTTAAACATTAAAGTAAAATAATATACATGTAAAATTCCTAAATTCATAACTCTGTTAAATATATAAAAAAATCACAATTTTTTTTTATATAAAGCTTATAAATATT] [+] EMBL BI514608 [AGAAATATATAAATAATTATTATGAATAAAATATATTTTTTACATATATTTATATATTTTTTTATATAATAATTTTAAAATGATATTCATTGGTTCATATTAAATTCATTTTATAGGAGAAGCAATAATATGTTACAAATGCAACAGCGAATACGATCCAAGGTGCGGCGATCCATTCGATCCGTACAGTCTTGGAACCGTGAATTGCAGTTTTCAACCACGCTTGGAGCATCTAAGTCATTTGGAGCCTACTCTTTGTCGAAAAATCAGCCAAAGAGGTATATCCAAAAAAATTATTTATTGTGTGTATAATATAGTTTTCGAAAATTATTTAATAAATTTTGTATCTGAAATATACAATAAATTATTCAAACTATTCATGAATTTTAACTATTGTTAAAATCAATATTATTGGCATCTGTTATTGAGTAAACATTACATTAACATTGTGATAATTAAATTTCAAAAGATTTAAACATTAAAGTAAAATAATATACATGTAAAATTCCTAAATTCATAACTCTGTTAAATATATAAAAAAATCACAATTTTTTTTTATATAAAGCTTATAAATATT] consensusID : consensus_2662#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence [AGTCATTTCGGACGTGAGAAAGGAGATCAAAGTCGATTAAACACTGCCATCAAATAAATTCTCTTCATTTGTTCCCAAGTTATCTATTATTTATCATTGTTTGATTCTCAAGGTGAATCTATTTTATAAAAATTGAAAACATTTAATCGAATCTGCCGCGTGCAAATTTTCCATGCAGCGGGGGTGGAGGCAACACGTCCGAAGTGACTGACTGCAACGTGATTAGTTGAAACACATGGTCCGGTGATCGTGATCATGATTGCAAATCGACTCTCGCTGATCGTCACCCTCGTCTTCGTGGTACTGCTGTCGACCATTCATTCCGGAGAAGCAATAATATGTTACAAATGCAACAGCGAATACGATCCAAGGTGCGGCGATCCATTCGATCCGTACAGTCTTGGAACCGTGAATTGCAGTTTTCAACCACGCTTGGAGCATCTAAGTCATTTGGAGCCTACTCTT] [+] EMBL BI513577 [AGTCATTTCGGACGTGAGAAAGGAGATCAAAGTCGATTAAACACTGCCATCAAATAAATTCTCTTCATTTGTTCCCAAGTTATCTATTATTTATCATTGTTTGATTCTCAAGGTGAATCTATTTTATAAAAATTGAAAACATTTAATCGAATCTGCCGCGTGCAAATTTTCCATGCAGCGGGGGTGGAGGCAACACGTCCGAAGTGACTGACTGCAACGTGATTAGTTGAAACACATGGTCCGGTGATCGTGATCATGATTGCAAATCGACTCTCGCTGATCGTCACCCTCGTCTTCGTGGTACTGCTGTCGACCATTCATTCCGGAGAAGCAATAATATGTTACAAATGCAACAGCGAATACGATCCAAGGTGCGGCGATCCATTCGATCCGTACAGTCTTGGAACCGTGAATTGCAGTTTTCAACCACGCTTGGAGCATCTAAGTCATTTGGAGCCTACTCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2662#0 AGAAATATATAA-ATAATTATTATGAATAAAATATATTTTTTACATATATTTATATATTT 59 consensus_2662#1 AGTCATTTCGGACGTGAGAAAGGAGATCAAAGTCGATTAAACACTGCCATCAAATAAATT 60 ** ** * * * * * ** *** * *** ** ** * * ** consensus_2662#0 TTTTATATAATAATTTTAAAATGATATTCATTGGTTCATATTAAATTCATTTTATAGGAG 119 consensus_2662#1 CTCTTCAT--TTGTTCCCAAGT--TATCTATTA-TTTATCATTGTTTGATTCTCAAGGTG 115 * * ** * ** ** * *** *** ** ** * ** *** * *** * consensus_2662#0 AAGCAATAATATGTTACAAATGCAACAGCGAATACGATCCAAGGTGCGGCGATCCATTCG 179 consensus_2662#1 AATCTAT--TTTATAAAAATTGAAA----ACATTTAATCGAATCTGCCGCG-TGCAAATT 168 ** * ** * * * * ** ** ** ** *** ** *** *** * ** consensus_2662#0 ATCCGTACAGTCTTGGAACCGTGAATTGCAGTTTTCAACCACGCTTGGAGCATCTAAGTC 239 consensus_2662#1 TTCCATGCAGC---GGGGGTGGAGGCAACACGTCCGAAGTG-ACTGACTGCAACGTGATT 224 *** * *** ** * ** * ** ** *** * * consensus_2662#0 ATTTGGAGCCTACTCTTTGTCGAAAAATCAGCCAAAGAGGTATATCCAAAAAAATTATTT 299 consensus_2662#1 AGTTGAAACACATGGTCCGGTGA--------TCGTGATCATGATTGCAAATCGACT-CTC 275 * *** * * * * * ** * * * **** * * * consensus_2662#0 ATTGTGTGTATAATATAGTTTTCGAAAATTATTTAATAAATTTTGTATCTGAAATATACA 359 consensus_2662#1 GCTGATCGT-CACCCTCGTCTTCGTGG-TACTGCTGTCGACCATTCATTCCGGAGAAGCA 333 ** ** * * ** **** * * * * * ** * * ** consensus_2662#0 ATAAATTATTCAAACTATTCATGAATTTTAACTATTGTTAAAATCAATATTATTGGCATC 419 consensus_2662#1 ATAATATGTTACAAATGC-----------AACAGCGAATACGATCCAAGGTGCGGCGATC 382 **** * ** ** * *** ** *** * * * *** consensus_2662#0 TGTTATTGAGTAAACATTACATTAACATTGTGATAATTAAATTTCAA--AAGATTTAAAC 477 consensus_2662#1 C---ATTCGATCCGTACAGTCTTGGAACCGTGAATTGCAGTTTTCAACCACGCTTGGAGC 439 *** * * ** * **** * ****** * * ** * * consensus_2662#0 ATTAAAGTAAAATAATATACATGTAAAATTCCTAAATTCATAACTCTGTTAAATATATAA 537 consensus_2662#1 ATCTAAGTCATTTGGAGCCTACTCTT---------------------------------- 465 ** **** * * * consensus_2662#0 AAAAATCACAATTTTTTTTTATATAAAGCTTATAAATATT 577 consensus_2662#1 ---------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |