These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2846#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 512 fasta sequence [ACTACATAATCAAAAACAATTCAGTAGGAGGAAAAAAGGAATGGACTGGACTCATTGGAGAACTGGTGAACGAAAGAGCAGATATGATTGTTGCTCCTTTAACAATTAATCCAGAACGTGCTGAGTTCATCGAATTTAGTAAGCCATTTAAATATCAAGGCATCACTATTCTTGAAAAGAAGCCATCAAGATCATCAACTTTGGTATCGTTCTTACAACCATTTAGCAATACTCTGTGGATACTGGTAATGGTATCGGTGCACGTAGTGGCTCTAGTTTTGTACCTCCTCGACCGGTTTTCGCCTTTCGGGAGGTTCAAGCTAGCAAACACTGACGGTACCGAAGNGGATGCTCTGAATTTATCTAGTGCTGTCTGGTTCGCTTGGGGAGTTCTTCTTAACAGTGGAATTGGAGAAGGAACTCCACGGAGTTTTTCTGCTCGAGTGTTGGGCATGGTATGGGCAGGTTTTGCGATGATTATCGTTGCTTCTTACACTGCCAATTTAGCTGCA] [+] EMBL BI516535 [ACTACATAATCAAAAACAATTCAGTAGGAGGAAAAAAGGAATGGACTGGACTCATTGGAGAACTGGTGAACGAAAGAGCAGATATGATTGTTGCTCCTTTAACAATTAATCCAGAACGTGCTGAGTTCATCGAATTTAGTAAGCCATTTAAATATCAAGGCATCACTATTCTTGAAAAGAAGCCATCAAGATCATCAACTTTGGTATCGTTCTTACAACCATTTAGCAATACTCTGTGGATACTGGTAATGGTATCGGTGCACGTAGTGGCTCTAGTTTTGTACCTCCTCGACCGGTTTTCGCCTTTCGGGAGGTTCAAGCTAGCAAACACTGACGGTACCGAAGNGGATGCTCTGAATTTATCTAGTGCTGTCTGGTTCGCTTGGGGAGTTCTTCTTAACAGTGGAATTGGAGAAGGAACTCCACGGAGTTTTTCTGCTCGAGTGTTGGGCATGGTATGGGCAGGTTTTGCGATGATTATCGTTGCTTCTTACACTGCCAATTTAGCTGCA] consensusID : consensus_2846#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 183 fasta sequence [TTCTTACACTGCCAATTTAGCTGCATTTCTTGTATTGGAACGGCCAAAAACGAAATTAACTGGTATCAACGATGCTCGACTTAGAAATACTATGGAGAATCTTACATGTGCCACGGTAAAAGGTTCTGCTGTAGACATGTATTTCCGTCGCCAAGTCGAATTATCCAATATGTATCGTACAAT] [+] EMBL BI511248 [TTCTTACACTGCCAATTTAGCTGCATTTCTTGTATTGGAACGGCCAAAAACGAAATTAACTGGTATCAACGATGCTCGACTTAGAAATACTATGGAGAATCTTACATGTGCCACGGTAAAAGGTTCTGCTGTAGACATGTATTTCCGTCGCCAAGTCGAATTATCCAATATGTATCGTACAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2846#0 ACTACATAATCAAAAACAATTCAGTAGGAGGAAAAAAGGAATGGACTGGACTCATTGGAG 60 consensus_2846#1 ------------------------------------------------------------ consensus_2846#0 AACTGGTGAACGAAAGAGCAGATATGATTGTTGCTCCTTTAACAATTAATCCAGAACGTG 120 consensus_2846#1 ------------------------------------------------------------ consensus_2846#0 CTGAGTTCATCGAATTTAGTAAGCCATTTAAATATCAAGGCATCACTATTCTTGAAAAGA 180 consensus_2846#1 ---------------TTCTTACACTGCC--AATTTAGCTGCATTTCTTGTATTGGAACG- 42 ** ** * *** * **** ** * *** ** * consensus_2846#0 AGCCATCAAGATCATCAACTTTGGTATCGTTCTTACAACCATTTAGCAATACTCTGTGGA 240 consensus_2846#1 -GCCAAAAACGAAATTAACT--GGTATCAACGATGCT-CGACTTAGAAATACTATGGAGA 98 **** ** ** **** ****** * * * * **** ****** ** ** consensus_2846#0 TACTGGTAATGGTATCGGTGCACGTAGTGGCTCTAGTTTTGTACCTCCTCGACCGGTTTT 300 consensus_2846#1 ATCTTACATGTGCCACGGTAAAAGGTTCTGCTGTAGACATGTATTTCCGTCGCCAAGTCG 158 ** * * **** * * *** *** **** *** ** * consensus_2846#0 CGCCTTTCGGGAGGTTCAAGCTAGCAAACACTGACGGTACCGAAGNGGATGCTCTGAATT 360 consensus_2846#1 AATTATCCAATATGTATCGTACAAT----------------------------------- 183 * * * ** * consensus_2846#0 TATCTAGTGCTGTCTGGTTCGCTTGGGGAGTTCTTCTTAACAGTGGAATTGGAGAAGGAA 420 consensus_2846#1 ------------------------------------------------------------ consensus_2846#0 CTCCACGGAGTTTTTCTGCTCGAGTGTTGGGCATGGTATGGGCAGGTTTTGCGATGATTA 480 consensus_2846#1 ------------------------------------------------------------ consensus_2846#0 TCGTTGCTTCTTACACTGCCAATTTAGCTGCA 512 consensus_2846#1 -------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |