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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_379#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 567 fasta sequence
[CCGATTGCTTGGAATCTTGGCCTCACCACCAAAGAGCCAAGGATTATCAAAGTGATTCTGCTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTACATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCGTCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGGTTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACATCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTAGAAAAGTACCACCGGTAGTGATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACCGCAGAAGGTCGTCAAAGAGCGGAAGAAATCGAGGCTCAAGCGTTTTATGAAATTTCTGTCAGAGAATCAGTCGAACAGGTAACATTAAACGAACATTAATCGAATTCATTATTCGATACTATACCCTTATTATACCATACCCTTTGT]
[+] EMBL BI510233 [CCGATTGCTTGGAATCTTGGCCTCACCACCAAAGAGCCAAGGATTATCAAAGTGATTCTGCTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTACATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCGTCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGGTTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACATCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTAGAAAAGTACCACCGGTAGTGATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACCGCAGAAGGTCGTCAAAGAGCGGAAGAAATCGAGGCTCAAGCGTTTTATGAAATTTCTGTCAGAGAATCAGTCGAACAGGTAACATTAAACGAACATTAATCGAATTCATTATTCGATACTATACCCTTATTATACCATACCCTTTGT]
[+] EMBL BI514749 [ AGAGCCAAGGATTATCAAAGTGATTCTGCTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTACATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCGTCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGGTTTGCAGATGCTATCGTTCTCGTTTATTCTGTGTCGGATCGTGTCAGCTTCGATGAAACATCTCGCCTTCGATTTCTAGTATCACACGCAAGAAAAACTAGAAAAGTACCACCGGTAGTGATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTAGTTTCCACCGCAGAAGGTCGTCAAAGAGCGGAAGAAATCGAGGCTCAAGCGT ]
[+] EMBL BI507324 [ CCAAGGATTATCAAANNNATTCTGCTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAACGGTGCGATTCGCTACGAAACGTTACATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCGTCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGGTTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACATCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTNGAAAAGTACCACCGGTAGTGATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACCGCAAAAGGTCGTCAAAGAGCGGAAGAAATCGAGGCTCAAGCGTTTT ]
consensusID : consensus_379#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence
[GATTCTGCTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTACATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCGTCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGGTTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACATCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTAGAAAAGTACCACCGGTAGTGATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACCGCAGAAGGTCGTCAAAGAGCGGAAGAAANNGAGGCTCAAGCGTTTTATGAAATTTCTGTCAGAGAATCAGTCGAACAGGTCATGGCCGTCTTCACAGACATTTTCAAACTGTTGACGGAATTGC]
[+] EMBL BI508677 [GATTCTGCTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTACATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCGTCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGGTTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACATCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTAGAAAAGTACCACCGGTAGTGATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACCGCAGAAGGTCGTCAAAGAGCGGAAGAAANNGAGGCTCAAGCGTTTTATGAAATTTCTGTCAGAGAATCAGTCGAACAGGTCATGGCCGTCTTCACAGACATTTTCAAACTGTTGACGGAATTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_379#0 CCGATTGCTTGGAATCTTGGCCTCACCACCAAAGAGCCAAGGATTATCAAAGTGATTCTG 60
consensus_379#1 -----------------------------------------------------GATTCTG 7
*******
consensus_379#0 CTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTAC 120
consensus_379#1 CTGGGTCATCAGGGTGTTGGAAAAACTGCTTTAGCGGTGCGATTCGCTACGAAACGTTAC 67
************************************************************
consensus_379#0 ATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCG 180
consensus_379#1 ATAGGGGAGTACGACTGCACCATCGAAAGGGTTTACAAGGTGGACAGTTTCCTGGATGCG 127
************************************************************
consensus_379#0 TCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGG 240
consensus_379#1 TCATGGGAGATAACAGATCCCCCAGGATATCTACCACCTCCGTCCGAGTTGAAATTGCGG 187
************************************************************
consensus_379#0 TTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACA 300
consensus_379#1 TTTGCAGATGCTATCGTTCTCGTTTATTCTGTATCGGATCGTGTCAGCTTCGATGAAACA 247
************************************************************
consensus_379#0 TCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTAGAAAAGTACCACCGGTAGTG 360
consensus_379#1 TCTCGCCTTCGATTTCTAGTATCACACGCAAGGAAAACTAGAAAAGTACCACCGGTAGTG 307
************************************************************
consensus_379#0 ATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACC 420
consensus_379#1 ATCCTCATAGCGAACAAAGCGGATCTAACATATACGCCTGGCGAAAGGGTGGTTTCCACC 367
************************************************************
consensus_379#0 GCAGAAGGTCGTCAAAGAGCGGAAGAAATCGAGGCTCAAGCGTTTTATGAAATTTCTGTC 480
consensus_379#1 GCAGAAGGTCGTCAAAGAGCGGAAGAAANNGAGGCTCAAGCGTTTTATGAAATTTCTGTC 427
**************************** ******************************
consensus_379#0 AGAGAATCAGTCGAACAGGTAACA-----TTAAACGAACATTAATCGAATTCATTATTCG 535
consensus_379#1 AGAGAATCAGTCGAACAGGTCATGGCCGTCTTCACAGACATTT-TCAAACTGTTGA--CG 484
******************** * * ** ***** ** ** * * * **
consensus_379#0 ATACTATACCCTTATTATACCATACCCTTTGT 567
consensus_379#1 GAATTGC------------------------- 491
* *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |