These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_526#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2134 fasta sequence [CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGTCATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGATTTCTATTTATCAGTAGAATGGGATATTTTAGAAGTACCAGCATCGAGAAATGAAGAATATTATCCATGTTGCACAGAACCCTATTCTGATATCACTTTTAATATTACAATGCGAAGAAAAACATTATTCTATACGGTTAACTTAATAATTCCTTGCGTGGGTATTACATTCCTTACAGTACTTGTATTTTATCTACCAAGTGATTCTGGTGAAAAAGTATCATTATGTTCTTCCATTCTCCTTTCATTGACGGTATTCTTTTTATTATTAGCCGAAATTATTCCACCAACATCTCTGGCTATACCACTTTTAGGAAAATATTTACTATTTACCATGATTTTAGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATCTACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCTAATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGGATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATTAAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGATGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATATTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAAAAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGATAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATTTCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGGAATATCACCTCGCAATTATATGTATCCAAATATAGACATTTCTCCAGAAGGATAAATTTTGAAATTCATAATATGTATAATACGCGTAAAAAGACTATATATAATATAAAAATATTAAATCATTAATATTCTATTTATATCTATTTTATTTCTTATAATTTTAGATTGATTTTTATAAACACAGAATTTATATCAAATATAATCTAAATAGTTTTATTAACCCTAAATTAAACAGTATTCACAACTAAATATTTTATTTAAAAAAAAGCAATTTTAAAAAAATTTTTAGGTTTAATTATATTAAAATTTGTAGTACAAGTATTTACATTTTATATTTCGTTCTTTCATTTACACATTAAAGTTAATAAGAAATTTATATTACAAAATAACCTTAAAATTCAAAATGACTATTATTTTAGACGAAATTATATATGATTTTATTATAATAATGAAAAAGTATAATAAAGTAATTTATTA] [+] EMBL AF514804 [CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGTCATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGATTTCTATTTATCAGTAGAATGGGATATTTTAGAAGTACCAGCATCGAGAAATGAAGAATATTATCCATGTTGCACAGAACCCTATTCTGATATCACTTTTAATATTACAATGCGAAGAAAAACATTATTCTATACGGTTAACTTAATAATTCCTTGCGTGGGTATTACATTCCTTACAGTACTTGTATTTTATCTACCAAGTGATTCTGGTGAAAAAGTATCATTATGTTCTTCCATTCTCCTTTCATTGACGGTATTCTTTTTATTATTAGCCGAAATTATTCCACCAACATCTCTGGCTATACCACTTTTAGGAAAATATTTACTATTTACCATGATTTTAGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATCTACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCTAATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGGATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATTAAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGATGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATATTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAAAAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGATAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATTTCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGGAATATCACCTCGCAATTATATGTATCCAAATATAGACATTTCTCCAGAAGGATAAATTTTGAAATTCATAATATGTATAATACGCGTAAAAAGACTATATATAATATAAAAATATTAAATCATTAATATTCTATTTATATCTATTTTATTTCTTATAATTTTAGATTGATTTTTATAAACACAGAATTTATATCAAATATAATCTAAATAGTTTTATTAACCCTAAATTAAACAGTATTCACAACTAAATATTTTATTTAAAAAAAAGCAATTTTAAAAAAATTTTTAGGTTTAATTATATTAAAATTTGTAGTACAAGTATTTACATTTTATATTTCGTTCTTTCATTTACACATTAAAGTTAATAAGAAATTTATATTACAAAATAACCTTAAAATTCAAAATGACTATTATTTTAGACGAAATTATATATGATTTTATTATAATAATGAAAAAGTATAATAAAGTAATTTATTA] [+] EMBL BI511350 [CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGTCATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATAT ] [-] EMBL BI503385 [ TTACCATGATTTTAGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATCTACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCTAATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGGATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATTAAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGATGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATATTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAAAAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGATAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATTTCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGG ] consensusID : consensus_526#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence [AATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAATTTATATTTCATTTAGGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAATCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGAT] [+] EMBL BI508716 [AATAATTATGTTTAAAATGCAAATATTGACGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAATTTATATTTCATTTAGGTGTTGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATTATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAATCTTGACAGTTCAACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCACCAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATACGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCTATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATATACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGTAGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAATGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAAAGGAATAGATTTAAGCGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_526#0 CTTACACTTAAAAATTACTATATAATATTGGCAGATAAACGTATTTTTATTGGGAGTGGT 60 consensus_526#1 ------------------------------------------------------------ consensus_526#0 CATTGCCATCTCAACCCTATATAAATTTGTAAATAATTATGTTTAAAATGCAAATATTGA 120 consensus_526#1 -------------------------------AATAATTATGTTTAAAATGCAAATATTGA 29 ***************************** consensus_526#0 CGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACA-----------------GTGT 163 consensus_526#1 CGCTTGGTGTTCTTTTTAATACTCTTCATATTATATACAATTTATATTTCATTTAGGTGT 89 *************************************** **** consensus_526#0 TGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATT 223 consensus_526#1 TGCTGGATTGAAAATTTTCGAAGCAAATCCTGACACAAAGAGACTTTATGATGACTTATT 149 ************************************************************ consensus_526#0 ATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAACCTTGACAGTTCA 283 consensus_526#1 ATCGAATTATAATAGACTTATACGACCTGTTATGAACAATACTGAAATCTTGACAGTTCA 209 *********************************************** ************ consensus_526#0 ACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCAC 343 consensus_526#1 ACTCGGTTTAAAATTATCACAATTAATTGAAATGAATTTAAAAAATCAAGTGATGACCAC 269 ************************************************************ consensus_526#0 CAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATA 403 consensus_526#1 CAATGTCTGGGTAGAACAGAGATGGAATGATTATAAACTAAAATGGAATCCAGAAGAATA 329 ************************************************************ consensus_526#0 CGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCT 463 consensus_526#1 CGGTGGCGTGGAAATGCTATATGTACCTTCCGAAAATATTTGGTTACCAGATATTGTTCT 389 ************************************************************ consensus_526#0 ATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATA 523 consensus_526#1 ATATAATAATGCTGACGGTAATTATGAAGTGACGCTTATGACAAAAGCTACATTAAAATA 449 ************************************************************ consensus_526#0 TACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGT 583 consensus_526#1 TACTGGTGATGTATCTTGGAAACCACCTGCAATTTATAAATCATCTTGTGAAATTAATGT 509 ************************************************************ consensus_526#0 AGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAA 643 consensus_526#1 AGAATATTTCCCATTCGACGAACAATCGTGTATTATGAAATTCGGTTCATGGACTTATAA 569 ************************************************************ consensus_526#0 TGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAA 703 consensus_526#1 TGGCGCTCAGGTAGATTTAAAACATATGAAACAAGAAGCTGGTAGCAATTTAGTTGCAAA 629 ************************************************************ consensus_526#0 AGGAATAGATTTAAGCGATTTCTATTTATCAGTAGAATGGGATATTTTAGAAGTACCAGC 763 consensus_526#1 AGGAATAGATTTAAGCGAT----------------------------------------- 648 ******************* consensus_526#0 ATCGAGAAATGAAGAATATTATCCATGTTGCACAGAACCCTATTCTGATATCACTTTTAA 823 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TATTACAATGCGAAGAAAAACATTATTCTATACGGTTAACTTAATAATTCCTTGCGTGGG 883 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TATTACATTCCTTACAGTACTTGTATTTTATCTACCAAGTGATTCTGGTGAAAAAGTATC 943 consensus_526#1 ------------------------------------------------------------ consensus_526#0 ATTATGTTCTTCCATTCTCCTTTCATTGACGGTATTCTTTTTATTATTAGCCGAAATTAT 1003 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TCCACCAACATCTCTGGCTATACCACTTTTAGGAAAATATTTACTATTTACCATGATTTT 1063 consensus_526#1 ------------------------------------------------------------ consensus_526#0 AGTCACTTTGTCGATATGGATTACTGTATGTGTTTTAAATGTCCATTTTCGATCTCCATC 1123 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TACACATAATATGTCACCATGGGTTAGACAAGTATTTTTAAATTGGATGCCGCGACTTCT 1183 consensus_526#1 ------------------------------------------------------------ consensus_526#0 AATGATGCGTAGAACTCCATATTCAACTCCAGAATATGATGATACATATATGGATAGCGG 1243 consensus_526#1 ------------------------------------------------------------ consensus_526#0 ATATACTAATGAAATAGATTTTAGTTTTCCTGATAGCGTTAGTGATTATCCACTGGAATT 1303 consensus_526#1 ------------------------------------------------------------ consensus_526#0 AAAAGGAAGTCCTGATGGATTTGAAAGTGTTACCTCTCAATATAAAAATATACGAGAAGA 1363 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TGATGCTCGACATATTCCACATGCATCAGTTACTGATAGTGAAAATACAGTCCCAAGATA 1423 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TTTATCTCCGGATGTTATCTCAGCTCTTAAAGGTGTGCGTTTTATTGCTCAACATATAAA 1483 consensus_526#1 ------------------------------------------------------------ consensus_526#0 AAATGCAGACAAAGATAATGAAGTTATAGAAGATTGGAAATTCGTAGCTATGGTTTTAGA 1543 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TAGACTTTTTCTTTGGGTTTTTACATTGGCATGTACTGCAGGAACACTTGGCATAATATT 1603 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TCAAGCACCAAGTTTATATGATACAAGAGAGCCTGTGGACCAACAACTTTCTGGAATATC 1663 consensus_526#1 ------------------------------------------------------------ consensus_526#0 ACCTCGCAATTATATGTATCCAAATATAGACATTTCTCCAGAAGGATAAATTTTGAAATT 1723 consensus_526#1 ------------------------------------------------------------ consensus_526#0 CATAATATGTATAATACGCGTAAAAAGACTATATATAATATAAAAATATTAAATCATTAA 1783 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TATTCTATTTATATCTATTTTATTTCTTATAATTTTAGATTGATTTTTATAAACACAGAA 1843 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TTTATATCAAATATAATCTAAATAGTTTTATTAACCCTAAATTAAACAGTATTCACAACT 1903 consensus_526#1 ------------------------------------------------------------ consensus_526#0 AAATATTTTATTTAAAAAAAAGCAATTTTAAAAAAATTTTTAGGTTTAATTATATTAAAA 1963 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TTTGTAGTACAAGTATTTACATTTTATATTTCGTTCTTTCATTTACACATTAAAGTTAAT 2023 consensus_526#1 ------------------------------------------------------------ consensus_526#0 AAGAAATTTATATTACAAAATAACCTTAAAATTCAAAATGACTATTATTTTAGACGAAAT 2083 consensus_526#1 ------------------------------------------------------------ consensus_526#0 TATATATGATTTTATTATAATAATGAAAAAGTATAATAAAGTAATTTATTA 2134 consensus_526#1 --------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |