These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_619#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1132 fasta sequence [CATTCTGATGTTGGAGCATTCCGTAGACGTCTTGTGATATCAGAAAAAAAAAAATAAATAAATAAATAAATAAATAAATATTCATATAGGCATCCCGTTTAAGTAAAGGAGCAAAAAAAAGATCACTGCGCTAGATTGGCACGCCCTTGTTAAGAGTTTAAAAAGAAAAAAAAATTAAAAAATGCAATGTAGTCACGGTATAAAAAAAAATAATAATAATAAATAAATAAATAAATAAATAAATAAGAGCGGTATTATAAATGTTACACTGATGCAGAAGTTTAAAAATCAATAACAGAGAAGTATCATTCGCAATCGACATACATGAAAGAAACGTATTTACATATAGACGTCTCGTGACACCTACATTCTTAAATAGAAAAACTTCTTAATTGTTAATTAAAAGAAAAAAAAAATAAAATAAAATGAGAAAATCAGTACGACGCTAGATTGGCACGCCACTAGAAGTTATTCATATAACGCGCCAAAGNNNATAGGAGAGCAAAAAAATAAATAAATAAATAAATAAAGAGAAGAACAGCAGGGAGGAAAATAAGTATACAAAAGTAATGAAAAACGCGTTCACTTACTCATTATTATTCTTATTATTACGAGTAATGTCATTCGGTTCGAATCTTTCTAAAAAATCAAATCTGAGTAGCTAATCGAGATGAGAGAAATCGTATAAATATTTTAGTAGTTCGTGAATCTCTATGCGAGAATCGTTACGCGGAAGAAAGAACAAACCAAGAAGGAACTGTAAAGAAAAGGATGAACTCGAAAAAAATTATTATTAGATGAGGCGAACACGGGGAATTAAAGGCAGAAACGGACAGTATGATATAAGTACCTATCAATTGAATCACTACCAAGAAAGAATAATACAAAGGGAACTAGATAAACGAGAAGAGGAAAGAGAAATAGTAAGAATAAAGAAGATATATATATATATATATATATGTTATTTAAATTGCGCGCCACAAAATGGTAAAGCGGCGGTCACAGTTTTGGTAATCGTTGAAATTAGATGAACTGCGTGCCACAATATTATTGACAAAACTTGAACAAATGAATTATGAAGTTATTGATTGAAAAAAAGAAAAGAAAAAAAAAACGGGAAATAAACATAGAC] [+] EMBL BI510636 [CATTCTGATGTTGGAGCATTCCGTAGACGTCTTGTGATATCAGAAAAAAAAAAATAAATAAATAAATAAATAAATAAATATTCATATAGGCATCCCGTTTAAGTAAAGGAGCAAAAAAAAGATCACTGCGCTAGATTGGCACGCCCTTGTTAAGAGTTTAAAAAGAAAAAAAAATTAAAAAATGCAATGTAGTCACGGTATAAAAAAAAATAATAATAATAAATAAATAAATAAATAAATAAATAAGAGCGGTATTATAAATGTTACACTGATGCAGAAGTTTAAAAATCAATAACAGAGAAGTATCATTCGCAATCGACATACATGAAAGAAACGTATTTACATATAGACGTCTCGTGACACCTACATTCTTAAATAGAAAAACTTCTTAATTGTTAATTAAAAGAAAAAAAAAATAAAATAAAATGAGAAAATCAGTACGACGCTAGATTGGCACGCCACTAGAAGTTATTCATATAACGCGCCAAAGNNNATAGGAGAGCAAAAAAATAAATAAATAAATAAATAAAGAGAAGAACAGCAGGGAGGAAAATAAGTATACAAAAGTAATGAAAAACGCGTTCACTTACTCATTA ] [+] EMBL BI510342 [ GAAGTTTAAAAATCAATAACAGAGAAGTATCATTCGCAATCGACATACATGAAAGAAACGTATTTACATATAGACGTCTCGTGACACCTACATTCTTAAATAGAAAAACTTCTTAATTGTTAATTAAAAGAAAAAAAAAATAAAATAAAATGAGAAAATCAGTACGACGCTAGATTGGCACGCCACTAGAAGTTATTCATATAACGCGCCAAAGAGGATAGGAGAGCAAAAAAATAAATAAATAAATAAATAAAGAGAAGAACAGCAGGGAGGAAAATAAGTATACAAAAGTAATGAAAAACGCGTTCACTTATTCATTATTATTCTTATTATTACGAGTAATGTCATTCGGTTCGAATCTTTCTAAAAAATCAAATCTGAGTAGCTAATCGAGATGAGAGAAATCGTATAAATATTTTAGTAGTTCGTGAATCTCTATGCGAGAATCGTTACGCGGAAGAAAGAACAAACCAAGAAGGAACTGTAAAGAAAAGGATGAACTCGAAAAAAATTATTATTAGATGAGGCGAACACGGGGAATTAAAGGCAGAAACGGACAGTATGATATAAGTACCTATCA ] [-] EMBL BE844627 [ GTTCGTGAATCTCTATGCGAGAATCGTTACGCGGAAGAAAGAACAAACCAAGAAGGAACTGTAAAGAAAAGAATGAACTCGAAAAAAATTATTATTAGATGAGGCGAACACGGGGAATTAAAGGCAGAAACGGACAGTATGATATAAGTACCTATCAATTGAATCACTACCAAGAAAGAATAATACAAAGGGAACTAGATAAACGAGAAGAGGAAAGAGAAATAGTAAGAATAAAGAAGATATATATATATATATATATATGTTATTTAAATTGCGCGCCACAAAATGGTAAAGCGGCGGTCACAGTTTTGGTAATCGTTGAAATTAGATGAACTGCGTGCCACAATATTATTGACAAAACTTGAACAAATGAATTATGAAGTTATTGATTGAAAAAAAGAAAAGAAAAAAAAAACGGGAAATAAACATAGAC] consensusID : consensus_619#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 351 fasta sequence [TTTTTTTTAATATCCTGTTATCTCGACTATCGTAGCGCCTTCACCCAGGAAACTACAAGGCCCCGGAGCGGCGTAGCTATTTTAAATTCTCGCTCTTAATAATGTCTATGTTTATTTCCCGTTTTTTTTTTCTTTTCTTTTTTCCAATCAATAACTTCATAATTCATTTGTTCAAGTTTTGTCAATAATACAAAGGGAACTAGATAAACGAGAAGAGGAAAGAGAAATAGTAAGAATAAATAACATATATATATATATATATATGTTATTTAAATTGCGCGCCACAAAATGGTAAAGCGGCGGTCACAGTTTTGGTAATCGTTGAAATTAGATGAACTGCGTGCCACAATA] [-] EMBL BI510644 [TTTTTTTTAATATCCTGTTATCTCGACTATCGTAGCGCCTTCACCCAGGAAACTACAAGGCCCCGGAGCGGCGTAGCTATTTTAAATTCTCGCTCTTAATAATGTCTATGTTTATTTCCCGTTTTTTTTTTCTTTTCTTTTTTCCAATCAATAACTTCATAATTCATTTGTTCAAGTTTTGTCAATAATACAAAGGGAACTAGATAAACGAGAAGAGGAAAGAGAAATAGTAAGAATAAATAACATATATATATATATATATATGTTATTTAAATTGCGCGCCACAAAATGGTAAAGCGGCGGTCACAGTTTTGGTAATCGTTGAAATTAGATGAACTGCGTGCCACAATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_619#0 CATTCTGATGTTGGAGCATTCCGTAGACGTCTTGTGATATCAGAAAAAAAAAAATAAATA 60 consensus_619#1 ------------------------------------------------------------ consensus_619#0 AATAAATAAATAAATAAATATTCATATAGGCATCCCGTTTAAGTAAAGGAGCAAAAAAAA 120 consensus_619#1 ------------------------------------------------------------ consensus_619#0 GATCACTGCGCTAGATTGGCACGCCCTTGTTAAGAGTTTAAAAAGAAAAAAAAATTAAAA 180 consensus_619#1 ------------------------------------------------------------ consensus_619#0 AATGCAATGTAGTCACGGTATAAAAAAAAATAATAATAATAAATAAATAAATAAATAAAT 240 consensus_619#1 ------------------------------------------------------------ consensus_619#0 AAATAAGAGCGGTATTATAAATGTTACACTGATGCAGAAGTTTAAAAATCAATAACAGAG 300 consensus_619#1 ------------------------------------------------------------ consensus_619#0 AAGTATCATTCGCAATCGACATACATGAAAGAAACGTATTTACATATAGACGTCTCGTGA 360 consensus_619#1 ------------------------------------------------------------ consensus_619#0 CACCTACATTCTTAAATAGAAAAACTTCTTAATTGTTAATTAAAAGAAAAAAAAAATAAA 420 consensus_619#1 ------------------------------------------------------------ consensus_619#0 ATAAAATGAGAAAATCAGTACGACGCTAGATTGGCACGCCACTAGAAGTTATTCATATAA 480 consensus_619#1 ------------------------------------------------------------ consensus_619#0 CGCGCCAAAGNNNATAGGAGAGCAAAAAAATAAATAAATAAATAAATAAAGAGAAGAACA 540 consensus_619#1 ------------------------------------------------------------ consensus_619#0 GCAGGGAGGAAAATAAGTATACAAAAGTAATGAAAAACGCGTTCACTTACTCATTATTAT 600 consensus_619#1 ------------------------------------------------------------ consensus_619#0 TCTTATTATTACGAGTAATGTCATTCGGTTCGAATCTTTCTAAAAAATCAAATCTGAGTA 660 consensus_619#1 ------------------------------------------------------------ consensus_619#0 GCTAATCGAGATGAGAGAAATCGTATAAATATTTTAGTAGTTCGTGAATCTCTATGCGAG 720 consensus_619#1 -------------------TTTTTTTTAATATCCTGTTATCTCGA------CTATCGTAG 35 * * * ***** * ** *** **** ** consensus_619#0 AATCGTTACGCGGAAGAAAGAACAAACCAAGAAGGAACTGTAAAG---AAAAGGATGAAC 777 consensus_619#1 CGCCTTCACCCAGGAAACTACAAGGCCCCGGAGCGGCGTAGCTATTTTAAATTCTCGCTC 95 * * ** * * * * * ** ** * * * *** * * consensus_619#0 TCGAAAAAAATTATTATTAGATGAGGCGAACACGGGGAATTAAAGGCAGAAACGGACAGT 837 consensus_619#1 TTAATAATGTCTATGTTTATTTCCCGTTTTTTTTTTCTTTTCTTTTTTCCAATCAATAAC 155 * * ** *** *** * * ** ** * * consensus_619#0 ATGATATAAGTACCTATCAATTGAATCACTACCAAGAAAGAATAATACAAAGGGAACTAG 897 consensus_619#1 TTCATA-----ATTCATTTGTTCAAGTTTTGTCAA-------TAATACAAAGGGAACTAG 203 * *** * ** ** ** * *** ****************** consensus_619#0 ATAAACGAGAAGAGGAAAGAGAAATAGTAAGAATAAAGAAGATATATATATATATATATA 957 consensus_619#1 ATAAACGAGAAGAGGAAAGAGAAATAGTAAGAATAAATA--ACATATATATATATATATA 261 ************************************* * * ***************** consensus_619#0 TATGTTATTTAAATTGCGCGCCACAAAATGGTAAAGCGGCGGTCACAGTTTTGGTAATCG 1017 consensus_619#1 TATGTTATTTAAATTGCGCGCCACAAAATGGTAAAGCGGCGGTCACAGTTTTGGTAATCG 321 ************************************************************ consensus_619#0 TTGAAATTAGATGAACTGCGTGCCACAATATTATTGACAAAACTTGAACAAATGAATTAT 1077 consensus_619#1 TTGAAATTAGATGAACTGCGTGCCACAATA------------------------------ 351 ****************************** consensus_619#0 GAAGTTATTGATTGAAAAAAAGAAAAGAAAAAAAAAACGGGAAATAAACATAGAC 1132 consensus_619#1 ------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |