These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence [TTTTAAATAACCTAGATGCTTGATATCTGTGTGTCTTTGGTAGGCCGTATTCGCTATTTCTTAGCGCCTATAAGGGTGGTAATTCGTATGCTGGGTCAAGGAAAACCGTTGGGGACCTGGGGCTGCGTCTCCGTTCGGAATGAATGTCGGACTTCCAGTTTCGGTGTTTTTGAACTTTGGGATCGGGGTGTTGTCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTGGTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTGCTACTGGACCCAGGTGCACCTGAGCCGGTGGTCTGTCGTGAATACATGTCACCCTGCGGGCCAGAGGGGTTCGAGTTGGAGTTGGGCTGCGAGGAATTAGGCTGAGGGGGCTGAGGTGGTGGCTGAGTCCCAGGAGGGGGCCCATTTTGTGGCAT] [+] EMBL BI514645 [TTTTAAATAACCTAGATGCTTGATATCTGTGTGTCTTTGGTAGGCCGTATTCGCTATTTCTTAGCGCCTATAAGGGTGGTAATTCGTATGCTGGGTCAAGGAAAACCGTTGGGGACCTGGGGCTGCGTCTCCGTTCGGAATGAATGTCGGACTTCCAGTTTCGGTGTTTTTGAACTTTGGGATCGGGGTGTTGTCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTGGTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTGCTACTGGACCCAGGTGCACCTGAGCCGGTGGTCTGTCGTGAATACATGTCACCCTGCGGGCCAGAGGGGTTCGAGTTGGAGTTGGGCTGCGAGGAATTAGGCTGAGGGGGCTGAGGTGGTGGCTGAGTCCCAGGAGGGGGCCCATTTTGTGGCAT] consensusID : consensus_653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 436 fasta sequence [TATTTTTTTATATATTTTTTTTTTTTTCTTTTTAAATATGTAATATGAAATAACCCACGAGCAAGGCCAAGCCATTCAGCGCATCTCTCCATCACGGGTCAATTAAAATGGTCATGAGGTGGGCCACTCTTTGAAATCAAAGCCTTGCTGGGGTTTAGGGGCGCTGGCGGCATACCCACCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTGGTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTGCTACTGGACCCAGGTGCACCTGAGCCGGTGGTCTGTCGTGAATACATGTCACCCTGCGGGCCAGNGGGGTTCGAGTTGGAGTTGGGCTGCGAGGAATTAGGCTGAGGGGGCTGAGGTGGTGGCTGAGTCCCAGGAGGGGGCCCATTTTGTGGC] [+] EMBL BI514813 [TATTTTTTTATATATTTTTTTTTTTTTCTTTTTAAATATGTAATATGAAATAACCCACGAGCAAGGCCAAGCCATTCAGCGCATCTCTCCATCACGGGTCAATTAAAATGGTCATGAGGTGGGCCACTCTTTGAAATCAAAGCCTTGCTGGGGTTTAGGGGCGCTGGCGGCATACCCACCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTGGTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTGCTACTGGACCCAGGTGCACCTGAGCCGGTGGTCTGTCGTGAATACATGTCACCCTGCGGGCCAGNGGGGTTCGAGTTGGAGTTGGGCTGCGAGGAATTAGGCTGAGGGGGCTGAGGTGGTGGCTGAGTCCCAGGAGGGGGCCCATTTTGTGGC] [+] EMBL BI514712 [ TTTTCTTTTTAAATATGTAATATGAAATAACCCACGAGCAAGGCCAAGCCATTCAGCGCATCTCTCCATCACGGGTCAATTAAAATGGTCATGAGGTGGGCCACTCTTTGAAATCAAAGCCTTGCTGGGGTTTAGGGGCGCTGGCGGCATACCCACCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTGGTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTGCTACTGGACCCA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_653#0 TTTTAAATAACCTAGATGCTTGATATCTGTGTGTCTTTGGTAGGCCGTATTCGCTATTTC 60 consensus_653#1 ----TATTTTTTTATATATTTTTTTTTTTTTCTTTTTAAATATGTAATATGAAATAACCC 56 * * ** ** ** * * * * * ** ** * *** ** * consensus_653#0 TT-AGCGCCTATAAGGGTGGTAATTCGTATGCTGGGTCAAGGAAAACCGTTGGGGACCTG 119 consensus_653#1 ACGAGCAAGGCCAAGCCATTCAGCGCATCT-CTCCATCACGGGTCAATTAAAATGGTCAT 115 *** *** * * * * ** *** ** * * * consensus_653#0 GGGCTGCGTCTCCGTTCGGAATGAATGTCGGACTTCCAGTTTCGGTGTTTTTGAACTTTG 179 consensus_653#1 GAGGTGGGCCACTCTTTGAAATCAAAGCCTTGCT---------GGGGTTTAGGGGCGCTG 166 * * ** * * * ** * *** ** * * ** ** **** * * ** consensus_653#0 GGATCGGGGTGTT-GTCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTG 238 consensus_653#1 G---CGGCATACCCACCTTGGTTGCTTTCTCCTCCTTGATACGAACGCTGAGGATAACTG 223 * *** * ******************************************** consensus_653#0 GTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTG 298 consensus_653#1 GTGTCAGCGTAATTACCATATGCAGAGTACCCAGTATAATCCGGAGTTTTAGCTGAACTG 283 ************************************************************ consensus_653#0 CTACTGGACCCAGGTGCACCTGAGCCGGTGGTCTGTCGTGAATACATGTCACCCTGCGGG 358 consensus_653#1 CTACTGGACCCAGGTGCACCTGAGCCGGTGGTCTGTCGTGAATACATGTCACCCTGCGGG 343 ************************************************************ consensus_653#0 CCAGAGGGGTTCGAGTTGGAGTTGGGCTGCGAGGAATTAGGCTGAGGGGGCTGAGGTGGT 418 consensus_653#1 CCAGNGGGGTTCGAGTTGGAGTTGGGCTGCGAGGAATTAGGCTGAGGGGGCTGAGGTGGT 403 **** ******************************************************* consensus_653#0 GGCTGAGTCCCAGGAGGGGGCCCATTTTGTGGCAT 453 consensus_653#1 GGCTGAGTCCCAGGAGGGGGCCCATTTTGTGGC-- 436 ********************************* |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |