These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_696#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 516 fasta sequence [TTGATGTACGTGGTAATTCAATGCGATTCTAAGAATAATAACGGGGAACTTCTGAAATATTTTGTCCGCGGCGTCGCCTTTTCCATCCAAATGTGGGAACATTTTTCTTAATCACGGCCGAAAAATACTGTGTGCAAATTTTTCTTTCGTTGAACTCTAATTTCCTCTAATTATATCTCCTGTTTTTCGATATTTCTTTTCTTCTTTTTTTTTTCNNTTC-TTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGAAACTCGGAAGAGAAAAAAAAAAAAAAGGAAAAAAAGAAGAAGAAAACCCATTTATTTCGGCGTGTACAAAGTACAAAGTTTCTAATTTTTTCTCTCTTTTTCTTTTATTTTCGCTTCTTCTCGAAAAAAGATATATTAACATTAACATGGTAAAATTCGAAAAATTGATTGCCACGCACGAAAGTTGCACAAGCCCGACAGACTGAAAAATATTCCT] [+] EMBL BI515824 [TTGATGTACGTGGTAATTCAATGCGATTCTAAGAATAATAACGGGGAACTTCTGAAATATTTTGTCCGCGGCGTCGCCTTTTCCATCCAAATGTGGGAACATTTTTCTTAATCACGGCCGAAAAATACTGTGTGCAAATTTTTCTTTCGTTGAACTCTAATTTCCTCTAATTATATCTCCTG TTTCGATATTTCTTTTCTTCTTTTTTTTTTCNNTTCTTTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGAAACTCGGAAGAGAAAAA ] [-] EMBL BI513299 [ TTGAACTCTAATTTCCTCTAATTATATCTCCTGTTTTTCGATATTTCTTTTCTTCTTTTTTTTTTCGTTTC TTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGAAACTCGGAAGAGAAAAAAAAAAAAAAGGAAAAAAAGAAGAAGAAAACCCATTTATTTCGGCGTGTACAAAGTACAAAGTTTCTAATTTTTTCTCTCTTTTTCTTTTATTTTCGCTTCTTCTCGAAAAAAGATATATTAACATTAACATGGTAAAATTCGAAAAATTGATTGCCACGCACGAAAGTTGCACAAGCCCGACAGACTGAAAAATATTCCT] consensusID : consensus_696#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence [CCACTGCACTTGGTTCTTCCTCATTATTCACGGAACACGTAACGATTTCCTCGGGTAAACATAATTGTAATTGATCGCTACTAGGATTGGTACTATCTCCTGTTTCGATATTTCTTTTCTTCTTTTTTTTTTCGTTTCTCTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTC] [-] EMBL BI508600 [CCACTGCACTTGGTTCTTCCTCATTATTCACGGAACACGTAACGATTTCCTCGGGTAAACATAATTGTAATTGATCGCTACTAGGATTGGTACTATCTCCTGTTTCGATATTTCTTTTCTTCTTTTTTTTTTCGTTTCTCTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_696#0 TTGATGTACGTGGTAATTCAATGCGATTCTAAGAATAATAACGGGGAACTTCTGAAATAT 60 consensus_696#1 ------------------------------------------------------------ consensus_696#0 TTTGTCCGCGGCGTCGCCTTTTCCATCCAAATGTGGGAACATTTTTCTTAATCACGGCCG 120 consensus_696#1 -----------------CCACTGCACTTGGTTCTTCCTCATTATTCACGGAACACG--TA 41 * * ** * * * ** * **** consensus_696#0 AAAAATACTGTGTGCAAATTTTTCTTTCGTTGAACTCTAATTTCCTCTAATTATATCTCC 180 consensus_696#1 ACGATTTCCTCGGGTAAACATAATTGTAATTGATCGCTA-CTAGGATTGGTACTATCTCC 100 * * * * * * *** * * * **** * *** * * * ******* consensus_696#0 TGTTTTTCGATATTTCTTTTCTTCTTTTTTTTTTCNNTTCT-TTTTTTTTTCTTTCTTGC 239 consensus_696#1 TGTTT--CGATATTTCTTTTCTTCTTTTTTTTTTCGTTTCTCTTTTTTTTTCTTTCTTGC 158 ***** **************************** **** ****************** consensus_696#0 TCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGA 299 consensus_696#1 TCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTC--- 215 ********************************************************* consensus_696#0 AACTCGGAAGAGAAAAAAAAAAAAAAGGAAAAAAAGAAGAAGAAAACCCATTTATTTCGG 359 consensus_696#1 ------------------------------------------------------------ consensus_696#0 CGTGTACAAAGTACAAAGTTTCTAATTTTTTCTCTCTTTTTCTTTTATTTTCGCTTCTTC 419 consensus_696#1 ------------------------------------------------------------ consensus_696#0 TCGAAAAAAGATATATTAACATTAACATGGTAAAATTCGAAAAATTGATTGCCACGCACG 479 consensus_696#1 ------------------------------------------------------------ consensus_696#0 AAAGTTGCACAAGCCCGACAGACTGAAAAATATTCCT 516 consensus_696#1 ------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |