These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_795#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence [TTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGAGATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAACAGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATCAATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTCATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAACTTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGGTGCGTCTACGAGATGAAATTTTACGCACGAATGGAATACCTTTGTTATTGTTGTGCATATTGATTTTTAACGCGCGAACCATAATTTCGATATTTATTTTATGTTACAGAAAGATGTTTATTATTTTTTTTATTTGTGACTGTGATTAAAAAAAAA] [+] EMBL BI506414 [TTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGAGATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAACAGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATCAATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTCATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAACTTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGGTGCGTCTACGAGATGAAATTTTACGCACGAATGGAATACCTTTGTTATTGTTGTGCATATTGATTTTTAACGCGCGAACCATAATTTCGATATTTATTTTATGTTACAGAAAGATGTTTATTATTTTTTTTATTTGTGACTGTGATTAAAAAAAAA] consensusID : consensus_795#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 398 fasta sequence [GCATATTTTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGAGATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAACAGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATCAATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTCATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAACTTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGAAAGATGTTTATTATTTTTTTTATTTGTGACTGTGATTAAA] [+] EMBL BI507975 [GCATATTTTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGAGATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAACAGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATCAATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTCATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAACTTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGAAAGATGTTTATTATTTTTTTTATTTGTGACTGTGATTAAA] [+] EMBL BI505304 [GCATATTTTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGATATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAACAGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATCAATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTCATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAACTTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGAAAGATGTTTATTATTTTTTTTATTTGTGACTGTGATTAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_795#0 -------TTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGAG 53 consensus_795#1 GCATATTTTGTAAAGCTAGTTGAGTGAATATGTTTGACATCTGAGAGCAAACGAAAAGAG 60 ***************************************************** consensus_795#0 ATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAAC 113 consensus_795#1 ATGTGAAAAAATGTCGGATAAAAGTGAAACTCGGTGATCTAAACTGGACAAATATACAAC 120 ************************************************************ consensus_795#0 AGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATC 173 consensus_795#1 AGTGAAGGAAAGAAAATTCGGTAGATTATTAACATTGCTTTTTGGAAGGTCACGATCATC 180 ************************************************************ consensus_795#0 AATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTC 233 consensus_795#1 AATAACCACTGCGTCAGTAGATAGTTAATTGAAAGAGGGGAACCTGTAAAGCTTGATCTC 240 ************************************************************ consensus_795#0 ATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAAC 293 consensus_795#1 ATACAGGTCAACACGTACGCACGATACAAAAGAAAAGGAGAACACGTACGGTGAAATAAC 300 ************************************************************ consensus_795#0 TTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGGTG 353 consensus_795#1 TTGAAGAGATCGCACGTATGCTACAATTCTTTGAAAAAACTTACGAATGGGGCACGGAAA 360 ********************************************************* consensus_795#0 CGTCTACGAGATGAAATTTTACGCACGAATGGAATACCTTTGTTATTGTTGTGCATATTG 413 consensus_795#1 GATGTTTATTATTTT-TTTTATTTGTGACTGTGATTAAA--------------------- 398 * * ** ***** ** ** ** consensus_795#0 ATTTTTAACGCGCGAACCATAATTTCGATATTTATTTTATGTTACAGAAAGATGTTTATT 473 consensus_795#1 ------------------------------------------------------------ consensus_795#0 ATTTTTTTTATTTGTGACTGTGATTAAAAAAAAA 507 consensus_795#1 ---------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |