These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_808#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 437 fasta sequence [TTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTGAAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAGATTGAAGGTAGCGAATATCCTGCTCTCATAACAGAACATAATGATCTAGGTGGGCAAAGGTTTTATGATGCTCGTAGTAAGCAAAGTTTTAAATATGACCATCTTAGAAAAGAAGCACAGGATTATGAACCATATGAACCNNATTCTGTGGCTGAACCTTGGAGATCAGCTCTTCAAGATGAAATAACAACTTATACTCAAAGTCATTATAGACATGGTGCATGTTCAGTCTTTGGAAAGAGTCAAGGAGGTAACATTACCTTAACGGCTTGCATAGAAGATCATCAGTTTCAACCTAAAAATTTTTGGAATGGCCGTTGGCGTTCTGTATGGA] [+] EMBL BI512092 [TTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTGAAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAGATTGAAGGTAGCGAATATCCTGCTCTCATAACAGAACATAATGATCTAGGTGGGCAAAGGTTTTATGATGCTCGTAGTAAGCAAAGTTTTAAATATGACCATCTTAGAAAAGAAGCACAGGATTATGAACCATATGAACCAGATTCTGTGGCTGAACCTTGGAGATCAGCTCTTCAAGATGAAATAACAACTTATACTCAAAGTCATTATAGACATGGTGCATGTTCAGTCTTTGGAAAGAGTCAAGGAGGTAACATTACCTTAACGGCTTGCATAGAAGATCATCAGTTTCAACCTAAAAATTTTTGGAATGGCCGTTGGCGTTCTGTATGGA] [+] EMBL BI512718 [TTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTGAAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAGATTGAAGGTAGCGAATATCCTGCTCTCATAACAGAACATAATGATCTAGGTGGGCAAAGGTTTTATGATGCTCGTAGTAAGCAAAGTTTTAAATATGACCATCTTAGAAAAGAAGCACAGGATTATGAACCATATGAACCNNATTCTGTGGCTGAACCTTGGAGATCAGCTCTTCAAGATGAAATAACAACTTATACTCAAAGTCATTATAGACATGGTGCATGTTCAGTCTTTGGAAAGAGTCAAGGAGGTAACATTACCTTAACGGCTTGCATAGAAGATCATCAGTTTCAACCTAAAAATTTTTGGAATGGCCGTTGGCGTTCTGTATG ] consensusID : consensus_808#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence [GGCGAATTCAACGAGGTTTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTGAAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAGGTACATCATCGACCTCTCTGATGAACTTTTATAATTTTTTGTGATAGTATCCGGGATATTGTCACAAAAAAAA] [+] EMBL BI505316 [GGCGAATTCAACGAGGTTTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTGAAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAGGTACATCATCGACCTCTCTGATGAACTTTTATAATTTTTTGTGATAGTATCCGGGATATTGTCACAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_808#0 -----------------TTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTG 43 consensus_808#1 GGCGAATTCAACGAGGTTTTTAATGATGTGAGAGTCTTGTTAAACAACGACAACCTGTTG 60 ******************************************* consensus_808#0 AAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAG 103 consensus_808#1 AAGGAGGGTGCGTCTGGAGCATTTGCTCAATACAACAAGGATCAGCTCACGCCTGTTAAG 120 ************************************************************ consensus_808#0 ATTGAAGGTAGCGAATATCCTGCTCTCATAACAGAACATAATGATCTAGGTGGGCAAAGG 163 consensus_808#1 GT--ACATCATCGA-----CCTCTCTGATGAACTTTTATAATTTTTTGTG-----ATAGT 168 * * * *** * **** ** * ***** * * * * ** consensus_808#0 TTTTATGATGCTCGTAGTAAGCAAAGTTTTAAATATGACCATCTTAGAAAAGAAGCACAG 223 consensus_808#1 ATCCGGGATA-TTGTCACAAAAAAAA---------------------------------- 193 * *** * ** ** *** consensus_808#0 GATTATGAACCATATGAACCNNATTCTGTGGCTGAACCTTGGAGATCAGCTCTTCAAGAT 283 consensus_808#1 ------------------------------------------------------------ consensus_808#0 GAAATAACAACTTATACTCAAAGTCATTATAGACATGGTGCATGTTCAGTCTTTGGAAAG 343 consensus_808#1 ------------------------------------------------------------ consensus_808#0 AGTCAAGGAGGTAACATTACCTTAACGGCTTGCATAGAAGATCATCAGTTTCAACCTAAA 403 consensus_808#1 ------------------------------------------------------------ consensus_808#0 AATTTTTGGAATGGCCGTTGGCGTTCTGTATGGA 437 consensus_808#1 ---------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |