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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 797 fasta sequence
[TGAACCTTCTGCTCCAGATTACAGACATATGTCTCATCCCGACGGAGAAGTGGAAATGGCAACAAGTTCAGGGATGTCTGGCGTAAGTGGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAAAGNNNACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCTCCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGCAAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGAAATTTTACACGAAATTTTAGACTAATCATTCAAAAGGAAAAGACATTTTTTTCGTTTTCTATGATAGATAAAAATAAATAGATCTCTTTGTCGATCAATAAGTTTATAATACGCGTTATACAATGTTCTAATTAGTACAGTGATTTTTCTAAGAATTTAAACAATTCATAAATATCGATTAGTCGCGTATAAACGCGATTTTCATTGTTGATTTAACTGTTTATCGAAATGTAAGTAAATACATTCTTGTTGCTCAATATACTTTGTAAATGATAATAGGATGACTAATTGTTACTATAACTAAGTACTGAAGAACATTAAATAATTTCCTGTTATAAAATGATAAGTCATAGTCAGTGATAATTATTTTTATGGTTCTTGTTACCTTTGTTCGTAAATGCATTAGATTGTATTTACATTCTATCGTCCATCCATTTGTCGGAATGTCATTTCACGTAGTATGGATATTTTTTTTGAAGTAAATTAATAAACGAATGATAAATT]
[+] EMBL BI508493 [TGAACCTTCTGCTCCAGATTACAGACATATGTCTCATCCCGACGGAGAAGTGGAAATGGCAACAAGTTCAGGGATGTCTGGCGTAAGTGGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAAAGNNNACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCTCCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGCAAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGA ]
[-] EMBL BQ103797 [ GGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAAAGGAAACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCTCCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGCAAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGAAATTTTACACGAAATTTTAGACTAATCATTCAAAAGGAAAAGACATTTTTTTCGTTTTCTATGATAGATAAAAATAAATAGATCTCTTTGTCGATCAATAAGTTTATAATACGCGTTATACAATGTTCTAATTAGTACAGTGATTTTTCTAAGAATTTAAACAATTCATAAATATCGATTAGTCGCGTATAAACGCGATTTTCATTGTTGATTTAACTGTTTATCGAAATGTAAGTAAATACATTCTTGTTGCTCAATATACTTTGTAAATGATAATAGGATGACTAATTGTTACTATAACTAAGTACTGAAGAACATTAAATAATTTCCTGTTATAAAATGATAAGTCATAGTCAGTGATAATTATTTTTATGGTTCTTGTTACCTTTGTTCGTAAATGCATTAGATTGTATTTACATTCTATCGTCCATCCATTTGTCGGAATGTCATTTCACGTAGTATGGATATTTTTTTTGAAGTAAATTAATAAACGAATGATAAATT]
consensusID : consensus_847#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[TTTTTTTTTTTTACAAACTGCCCTGACAAGAAATTAACGAACGATTGACCGTGGATTAAAGTGACGTCATTTTAAGACATATGTCTCATCCCGACGGAGAAGTGGAAATGGCAACAAGTTCAGGGATGTCTGGCGTAAGTGGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAAAGGAAACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCTCCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGCAAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGAAATTTTACACGAAATTTTAGACTAATCATTCAAAAGGAAAAGACATTTTTTTCGTTTTCTATGATAGATAAAAATAAATAGATCTCTTTGTCGATCAATAAGTTTATAATACGCGTTATACAATGTTCTAATTAGTACAGTGATTTTTCTAAGAATTTAAACAATTCATAAATATCGATTAGTCGCGTATA]
[+] EMBL BI511991 [TTTTTTTTTTTTACAAACTGCCCTGACAAGAAATTAACGAACGATTGACCGTGGATTAAAGTGACGTCATTTTAAGACATATGTCTCATCCCGACGGAGAAGTGGAAATGGCAACAAGTTCAGGGATGTCTGGCGTAAGTGGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAAAGGAAACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCTCCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGCAAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGAAATTTTACACGAAATTTTAGACTAATCATTCAAAAGGAAAAGACATTTTTTTCGTTTTCTATGATAGATAAAAATAAATAGATCTCTTTGTCGATCAATAAGTTTATAATACGCGTTATACAATGTTCTAATTAGTACAGTGATTTTTCTAAGAATTTAAACAATTCATAAATATCGATTAGTCGCGTATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_847#0 ---------------------------------------------------TGAACCTTC 9
consensus_847#1 TTTTTTTTTTTTACAAACTGCCCTGACAAGAAATTAACGAACGATTGACCGTGGATTAAA 60
** *
consensus_847#0 -TGCTCCAGATTACAGACATATGTCTCATCCCGACGGAGAAGTGGAAATGGCAACAAGTT 68
consensus_847#1 GTGACGTCATTTTAAGACATATGTCTCATCCCGACGGAGAAGTGGAAATGGCAACAAGTT 120
** ** **********************************************
consensus_847#0 CAGGGATGTCTGGCGTAAGTGGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAA 128
consensus_847#1 CAGGGATGTCTGGCGTAAGTGGTACTCTCGACGTAAGGACATCGACCCTTGGCAGCGAAA 180
************************************************************
consensus_847#0 AGNNNACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCT 188
consensus_847#1 AGGAAACGATGGATGCTACGAGTTTGCCGCCGAGTGTTAGCTCTGATACAGCTTTCACCT 240
** *******************************************************
consensus_847#0 CCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGC 248
consensus_847#1 CCTTCTATGGGAATTACTACGATTGAGGAAGGATCTTAGGAACTTAGGAAGATATAAAGC 300
************************************************************
consensus_847#0 AAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGAAATTTTACACGAAAT 308
consensus_847#1 AAGCCGAGGAATAAATAAATTTTGCCATGTGTGCGCTCTTGTTGAAATTTTACACGAAAT 360
************************************************************
consensus_847#0 TTTAGACTAATCATTCAAAAGGAAAAGACATTTTTTTCGTTTTCTATGATAGATAAAAAT 368
consensus_847#1 TTTAGACTAATCATTCAAAAGGAAAAGACATTTTTTTCGTTTTCTATGATAGATAAAAAT 420
************************************************************
consensus_847#0 AAATAGATCTCTTTGTCGATCAATAAGTTTATAATACGCGTTATACAATGTTCTAATTAG 428
consensus_847#1 AAATAGATCTCTTTGTCGATCAATAAGTTTATAATACGCGTTATACAATGTTCTAATTAG 480
************************************************************
consensus_847#0 TACAGTGATTTTTCTAAGAATTTAAACAATTCATAAATATCGATTAGTCGCGTATAAACG 488
consensus_847#1 TACAGTGATTTTTCTAAGAATTTAAACAATTCATAAATATCGATTAGTCGCGTATA---- 536
********************************************************
consensus_847#0 CGATTTTCATTGTTGATTTAACTGTTTATCGAAATGTAAGTAAATACATTCTTGTTGCTC 548
consensus_847#1 ------------------------------------------------------------
consensus_847#0 AATATACTTTGTAAATGATAATAGGATGACTAATTGTTACTATAACTAAGTACTGAAGAA 608
consensus_847#1 ------------------------------------------------------------
consensus_847#0 CATTAAATAATTTCCTGTTATAAAATGATAAGTCATAGTCAGTGATAATTATTTTTATGG 668
consensus_847#1 ------------------------------------------------------------
consensus_847#0 TTCTTGTTACCTTTGTTCGTAAATGCATTAGATTGTATTTACATTCTATCGTCCATCCAT 728
consensus_847#1 ------------------------------------------------------------
consensus_847#0 TTGTCGGAATGTCATTTCACGTAGTATGGATATTTTTTTTGAAGTAAATTAATAAACGAA 788
consensus_847#1 ------------------------------------------------------------
consensus_847#0 TGATAAATT 797
consensus_847#1 ---------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |