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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_945#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 511 fasta sequence
[ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAACGTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACTCGAGCGGTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACAGCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCGGTGGTTCGTCACTCCATATATTTCCATCTATATATATATATATATATATTGCAATCATAATTTTGAATCAGTTTTTTTTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTATAGCCACCATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAGAGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCA]
[+] EMBL BI513855 [ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAACGTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACTCGAGCGGTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACAGCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCGGTGGTTCGTCACTCCATATATTTCCATCTATATATATATATATATATATTGCAATCATAATTTTGAATCAGTTTTTTTTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTATAGCCACCATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAGAGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCA]
[+] EMBL BI513945 [ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAACGTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACTCGAGCGGTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACAGCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCGGTGGTTCGTCACTCCATATATTTCCATCTATATATATATATATATATATTGCAATCATAATTTTGAATCAGTTTTTTTTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTATAGCCACCATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAGAGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTC ]
consensusID : consensus_945#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 351 fasta sequence
[AGCAGAGTACACGAGAATAATTCATCGGGAGTTTCAATCGAAGAGTTACTCTGAGTTACTAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCAATCCTCGATAGGACAAAAGGACCCGGACACGCGAGTTGGCCGAAACATATCGAGAGCTACTTTGTCCAACACTGTATGTATTCGTTATAAAAGAGCACAGAAACGTCCATTTAAACGCTATCCGACACTGTCTCCATTGATTTTTGAAAATCGAATAAAGATTTTTCTCACGAGTGTATTAATAACCAGATATCGTATATATCCGTGA]
[+] EMBL BI505643 [AGCAGAGTACACGAGAATAATTCATCGGGAGTTTCAATCGAAGAGTTACTCTGAGTTACTAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCAATCCTCGATAGGACAAAAGGACCCGGACACGCGAGTTGGCCGAAACATATCGAGAGCTACTTTGTCCAACACTGTATGTATTCGTTATAAAAGAGCACAGAAACGTCCATTTAAACGCTATCCGACACTGTCTCCATTGATTTTTGAAAATCGAATAAAGATTTTTCTCACGAGTGTATTAATAACCAGATATCGTATATATCCGTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_945#0 ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAAC 60
consensus_945#1 -----------------------AGCAGAGTACACGAGAATAATTCAT--CGGGAGTTTC 35
*** ** * * *** ** ** ** * *
consensus_945#0 GTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACT-CGAGCG 119
consensus_945#1 AATCGAAGAGTTAC---TCTGAGTTACTAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCC 92
* * **** ** * ** * * **** *** ** * *** *
consensus_945#0 GTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACA 179
consensus_945#1 GCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCA-CGACGC-TGTGACCAATCCTCG 150
* *** * * * ** * ** ** ** ** *
consensus_945#0 GCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCG-GTGGTTCGTCACTCCATA 238
consensus_945#1 ATAGGAC-AAAAGGACCCGGACACGCGAGTTGGCCGAAACATATCGAGAGCTACTTTGTC 209
*** ** * * * *** * ** * * * * * * *** *
consensus_945#0 TATTTCCATCTATATATAT-ATATATATATATTGCAATCATAATTTTGAATCAGTTTTTT 297
consensus_945#1 CAACACTGTATGTATTCGTTATAAAAGAGCACAGAAACGTCCATTTAAACGCTATCCGAC 269
* * * * *** * *** * * * ** **** * * *
consensus_945#0 TTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTAT 357
consensus_945#1 ACTGTCTCCATTGATTTTTGAAAAT---CGAATAAAGATTTTTCTCACGAGTGTATTAAT 326
* ** * ***** *** * * ** * *** ** * * * * **
consensus_945#0 AGCCAC-CATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAG 416
consensus_945#1 AACCAGATATCGTATATATCCGTGA----------------------------------- 351
* *** *** * *** * * *
consensus_945#0 AGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCC 476
consensus_945#1 ------------------------------------------------------------
consensus_945#0 TTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCA 511
consensus_945#1 -----------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |