These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_945#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 511 fasta sequence [ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAACGTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACTCGAGCGGTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACAGCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCGGTGGTTCGTCACTCCATATATTTCCATCTATATATATATATATATATATTGCAATCATAATTTTGAATCAGTTTTTTTTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTATAGCCACCATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAGAGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCA] [+] EMBL BI513855 [ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAACGTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACTCGAGCGGTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACAGCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCGGTGGTTCGTCACTCCATATATTTCCATCTATATATATATATATATATATTGCAATCATAATTTTGAATCAGTTTTTTTTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTATAGCCACCATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAGAGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCA] [+] EMBL BI513945 [ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAACGTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACTCGAGCGGTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACAGCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCGGTGGTTCGTCACTCCATATATTTCCATCTATATATATATATATATATATTGCAATCATAATTTTGAATCAGTTTTTTTTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTATAGCCACCATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAGAGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTC ] consensusID : consensus_945#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 351 fasta sequence [AGCAGAGTACACGAGAATAATTCATCGGGAGTTTCAATCGAAGAGTTACTCTGAGTTACTAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCAATCCTCGATAGGACAAAAGGACCCGGACACGCGAGTTGGCCGAAACATATCGAGAGCTACTTTGTCCAACACTGTATGTATTCGTTATAAAAGAGCACAGAAACGTCCATTTAAACGCTATCCGACACTGTCTCCATTGATTTTTGAAAATCGAATAAAGATTTTTCTCACGAGTGTATTAATAACCAGATATCGTATATATCCGTGA] [+] EMBL BI505643 [AGCAGAGTACACGAGAATAATTCATCGGGAGTTTCAATCGAAGAGTTACTCTGAGTTACTAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCAATCCTCGATAGGACAAAAGGACCCGGACACGCGAGTTGGCCGAAACATATCGAGAGCTACTTTGTCCAACACTGTATGTATTCGTTATAAAAGAGCACAGAAACGTCCATTTAAACGCTATCCGACACTGTCTCCATTGATTTTTGAAAATCGAATAAAGATTTTTCTCACGAGTGTATTAATAACCAGATATCGTATATATCCGTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_945#0 ATTAATTAACCATTTCTCTTCGCTGCACCATATATAACAATCATCCACGATGGATGAAAC 60 consensus_945#1 -----------------------AGCAGAGTACACGAGAATAATTCAT--CGGGAGTTTC 35 *** ** * * *** ** ** ** * * consensus_945#0 GTCCAAGGAGTGACGAACATCGGTCGGTTATACACGGTTCGAGAGACGAAACT-CGAGCG 119 consensus_945#1 AATCGAAGAGTTAC---TCTGAGTTACTAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCC 92 * * **** ** * ** * * **** *** ** * *** * consensus_945#0 GTATTCAGAAACGGAGAAAAAGATTACAGAGTTTCGAATAGCGTATGGAACGAAGTAACA 179 consensus_945#1 GCCTTCTTCTCCTTCCTTCCTTCTCCCCCCTCCTCCA-CGACGC-TGTGACCAATCCTCG 150 * *** * * * ** * ** ** ** ** * consensus_945#0 GCGGGAGGAAGAAAAATTGATCACTCTCGTGGTTTCACTCG-GTGGTTCGTCACTCCATA 238 consensus_945#1 ATAGGAC-AAAAGGACCCGGACACGCGAGTTGGCCGAAACATATCGAGAGCTACTTTGTC 209 *** ** * * * *** * ** * * * * * * *** * consensus_945#0 TATTTCCATCTATATATAT-ATATATATATATTGCAATCATAATTTTGAATCAGTTTTTT 297 consensus_945#1 CAACACTGTATGTATTCGTTATAAAAGAGCACAGAAACGTCCATTTAAACGCTATCCGAC 269 * * * * *** * *** * * * ** **** * * * consensus_945#0 TTTTATACCGTGGATTTCACAAATTTTCCAAAGATCCGTTTCTCACTCAGGCCCAGCTAT 357 consensus_945#1 ACTGTCTCCATTGATTTTTGAAAAT---CGAATAAAGATTTTTCTCACGAGTGTATTAAT 326 * ** * ***** *** * * ** * *** ** * * * * ** consensus_945#0 AGCCAC-CATCATTTATTTTTTTCAAACAGCAGAGTACACGAGAATAATTTCAATCGAAG 416 consensus_945#1 AACCAGATATCGTATATATCCGTGA----------------------------------- 351 * *** *** * *** * * * consensus_945#0 AGTTACTCTGGCAAGTTGAGGTTAGAGTAGCGCCTGTGCGATCCGCCTTCTTCTCCTTCC 476 consensus_945#1 ------------------------------------------------------------ consensus_945#0 TTCCTTCTCCCCCCTCCTCCACGACGCTGTGACCA 511 consensus_945#1 ----------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |