|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1390 fasta sequence
[CCGTCGTTCGCGACACCGCTCTCCTCGCCGTCGCCGCCTCCGCCGCCGCCCTCGCGAAGCTTCTGGTCCAACCGGCGCAGCCATGGGGGATGGAGGGGAGCTGGCGGCGGAGAAGCACGTCCGCTACATCGTCACCGTGGAGAAGAGGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCGGCTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCGCGCCGTGGAAGCCGACGAGGTCATCGAGTGGATCATGTCCTGCTACCACCCGGAATCCGGTGGATTCGGGGGAAACGTTGGGCATGACGCGCATGTCCTCTACACGCTCAGCGCCGTGCAGGTCCTGTGCCTCTTTGATCGGCTTGACGCTCTCGATGTCGATAAGGTTGCTGATTACATTGCTGGGCTTCAAAATGAAGATGGATCATTTTCTGGTGATATTTGGGGTGAAGTGGACACTAGATTCTCATACATTGCAATATGCACCCTCTCTTTGCTGCATCGGCTGGAAAAAATTAATGTGCAAAAAGCTGTTGATTATATTGTAAGCTGTAAGAACTTGGATGGTGGATTTGGAGCTATGCCAGGAGGTGAATCACACGCTGGGCAGATATTTTGTTGTGTTGGCGCTCTCGCAATCACTGGCTCGTTGCATCACATTGATAGAGATCTCCTTGGATGGTGGCTTTGTGAGCGTCAGTGCAAAGAGGGAGGGCTCAATGGACGGCCTGAGAAACTTGCTGATGTGTGCTACTCCTGGTGGGTGCTCTCAAGCTTGATAATGATTGATAGAGTGCACTGGATTGACAAGGACAAACTTGCAAAATTCATACTAAATTGCCAGGACAAGGAAAATGGTGGAATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGTTGCAGGGCTTTCACTGATGGAGTACCCTG-GAGTGAAACCCATGGACCCTGCCTACGCGCTGCCGCTGGATGTTGTCAACCGGATTTTCTTGAGAAAAGAACATTAGCATCTGCACGCTCCACAGATCATGCTGTGTAACATGGACAGGAACACGTGGTTTACTTGAAAAATCTGAAAATCATCCCCATGGAAGAACGAATGCAGCATCAAATTCAAGTGGTAACTAGAATATGTTGTCAGGATATCGCGACCAAGCTTTCTTGAGAGTTGAGAGTCAACACCGACTTCACACTCAACAGCATGCTTGTACTAACTGAAGTTGTACTGTTCTACGCAACGGCAAGCAATATTTTTTTTGTTTATTAATTTTGAGACCGCGCGGTAAACAATTCTCTTGTAGTTGTATATTTCAATAAAATGTTTTTGCTGGAGCAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK102273 [CCGTCGTTCGCGACACCGCTCTCCTCGCCGTCGCCGCCTCCGCCGCCGCCCTCGCGAAGCTTCTGGTCCAACCGGCGCAGCCATGGGGGATGGAGGGGAGCTGGCGGCGGAGAAGCACGTCCGCTACATCGTCACCGTGGAGAAGAGGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCGGCTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCGCGCCGTGGAAGCCGACGAGGTCATCGAGTGGATCATGTCCTGCTACCACCCGGAATCCGGTGGATTCGGGGGAAACGTTGGGCATGACGCGCATGTCCTCTACACGCTCAGCGCCGTGCAGGTCCTGTGCCTCTTTGATCGGCTTGACGCTCTCGATGTCGATAAGGTTGCTGATTACATTGCTGGGCTTCAAAATGAAGATGGATCATTTTCTGGTGATATTTGGGGTGAAGTGGACACTAGATTCTCATACATTGCAATATGCACCCTCTCTTTGCTGCATCGGCTGGAAAAAATTAATGTGCAAAAAGCTGTTGATTATATTGTAAGCTGTAAGAACTTGGATGGTGGATTTGGAGCTATGCCAGGAGGTGAATCACACGCTGGGCAGATATTTTGTTGTGTTGGCGCTCTCGCAATCACTGGCTCGTTGCATCACATTGATAGAGATCTCCTTGGATGGTGGCTTTGTGAGCGTCAGTGCAAAGAGGGAGGGCTCAATGGACGGCCTGAGAAACTTGCTGATGTGTGCTACTCCTGGTGGGTGCTCTCAAGCTTGATAATGATTGATAGAGTGCACTGGATTGACAAGGACAAACTTGCAAAATTCATACTAAATTGCCAGGACAAGGAAAATGGTGGAATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGTTGCAGGGCTTTCACTGATGGAGTACCCTG GAGTGAAACCCATGGACCCTGCCTACGCGCTGCCGCTGGATGTTGTCAACCGGATTTTCTTGAGAAAAGAACATTAGCATCTGCACGCTCCACAGATCATGCTGTGTAACATGGACAGGAACACGTGGTTTACTTGAAAAATCTGAAAATCATCCCCATGGAAGAACGAATGCAGCATCAAATTCAAGTGGTAACTAGAATATGTTGTCAGGGTATCGCGACCAAGCTTTCTTGAGAGTTGAGAGTCAACACCGACTTCACACTCAACAGCATGCTTGTACTAACTGAAGTTGTACTGTTCTACGCAACGGCAAGCAATATTTTTTTTGTTTATTAATTTTGAGACCGCGCGGTAAACAATTCTCTTGTAGTTGTATATTTCAATAAAATGTTTTTG ]
[-] EMBL CA762661 [ cagacAAGGGGGAGGGCTCAATGGACGGCCTGAGAAACTTGNTGATGTGTGCTATTCCTGGTGGGTGCTCTCAAGCTTGATAATGATTGATAGAGTGCACTGGATTGACAAGGACAAACTTGCAAAATTCATACTAAATTGCCAGGACAAGGAAAATGGTGGAATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGTTGCAGGGCTTTCACTGATGGAGTACCCTG GAGTGAAACCCATGGACCCTGCCTACGCGCTGCCGCTGGATGTTGTCAACCGGATTTTCTTGAGAAAAGAACATTAGCATTTGCACGCTCCACAGATCATGCTGTGTAACATGGATAGGAACACGTGGTTTACTTGAAAAATTTGAAAATCATCCCCATGGAAGAACGAATGCAGCATCAAATTCAAGTGGTAACTAGAATATGTTGTCAGGATATCGCAACCAAGCTTTCTTGAGAGTTGAGAGTCAACACCGACTTCACACTCAACAGCATGCTTGTACTAACTGAAGTTGTACTGTTTTACGCAACGGCAAGCAATATTTTTTTTGTTTATTAATTTTGAGACCGCGCGGTAAACAATTCTCTTGTAGTTGTATATTTCAATAAAATGTTTTTGCTGGAGCAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB680278 [ AGTACCCTGTGAGTGAAACCCATGGACCCTGCCTACGCGCTGCCGCTGGATGTTGTCAACCGGATTTTCTTGAGAAAAGAACATTAGCATCTGCACGCTCCACAGATCATGCTGTGTAACATGGACAGGAACACGTGGTTTACTTGAAAAATCTGAAAATCATCCCCATGGAAGAACGAATGCAGCATCAAATTCAAGTGGTAACTAGAATATGTTGTCAGGATATCGCGACCAAGCTTTCTTGAGAGTTGAGAGTCAACACCGACTTCACACTCAACAGCATGCTTGTACTAACTGAAGTTGTACTGTTCTACGCAACGGCAAGCAATATTTTTTTTGTTTATTAATTTTGAGACCGCGCGGTAAACAATTCTCTTGTAGTTGTATATTTCAATAAAATGTTTTTGCTG ]
consensusID : consensus_10051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 952 fasta sequence
[TCGCCGCCGCCGCCTCCCTCGCGAAGCTTCTGGCCTAGCCGGCGCAGCCATGGGGGATTGAGGGGAGCTGGCGGCGGAGAAACACGTCCGCTACATCGTCACCGTGGAGAAGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCGACTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCACGCCGTAGAAGCCGACGAATTCATCGGGTGGATCATGTCCTGCTACCACCCGGATTCCGGATCCGCGAGAAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTGATGGTCTTGGGATCCTTGAGGGAGACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATTTGGGTGTTGTAGGTGGATTGAGGGGAAACGTTGGGCACGACGCGCATGTCCTCTACACGCTCAGCGCCGTGCACGTCCTGTGCCTCTTTGATCGGCTTGATGCTCTCGATGTCGATAAGGTTGCTGATTGTATCCTTTACTACTAGATCTTGACTGAGGTTCATCATGCTTGTGCCAACCTTAGTTTATCAATGTGCAAATGAATCTAGGGCATAAAAAAAAACTCATCAGATTAAATAGTGTAAAGGTACAGGGATGAAGTGTTGCGTGTGGTGTTCCTCGTTCGCATGCGGGAGTCAGCCGGCCGAGCTCCTAGTCGTTCCTTTCGCTGTCTGGTGTGTTTTTGGTGGGTATCCAGCCTCCCGTTGGTGGGGTTTTTTTGTAGCCTTGTGTAATTGGTGTGTCGATGTGCGGTGCTGGGGATTGATATGGTCGGCGCTGGCGACATGATTCTGGCGTGTGCCGTGCGCGGGGGCCGTGTGAGCGTGGTCGTCCTTGGCGCTCTGGGCCGGATCTTAGTTGTCGCATTGGATATGTAGGCGGGGGGATCGGGGTGTGATTAGCATAGCGTAG]
[+] EMBL BE039852 [TCGCCGCCGCCGCCTCCCTCGCGAAGCTTCTGGCCTAGCCGGCGCAGCCATGGGGGATTGAGGGGAGCTGGCGGCGGAGAAACACGTCCGCTACATCGTCACCGTGGAGAAGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCGACTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCACGCCGTAGAAGCCGACGAATTCATCGGGTGGATCATGTCCTGCTACCACCCGGATTCCGGATCCGCGAGAAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTGATGGTCTTGGGATCCTTGAGGGAGACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATTTGGGTGTTGTAGGTGGATTGAGGGGAAACGTTGGGCACGACGCGCATGTCCTCTACACGCTCAGCGCCGTGCACGTCCTGTGCCTCTTTGATCGGCTTGATGCTCTCGATGTCGATAAGGTTGCTGATTGTATCCTTTACTACTAGATCTTGACTGAGGTTCATCATGCTTGTGCCAACCTTAGTTTATCAATGTGCAAATGAATCTAGGGCATAAAAAAAAACTCATCAGATTAAATAGTGTAAAGGTACAGGGATGAAGTGTTGCGTGTGGTGTTCCTCGTTCGCATGCGGGAGTCAGCCGGCCGAGCTCCTAGTCGTTCCTTTCGCTGTCTGGTGTGTTTTTGGTGGGTATCCAGCCTCCCGTTGGTGGGGTTTTTTTGTAGCCTTGTGTAATTGGTGTGTCGATGTGCGGTGCTGGGGATTGATATGGTCGGCGCTGGCGACATGATTCTGGCGTGTGCCGTGCGCGGGGGCCGTGTGAGCGTGGTCGTCCTTGGCGCTCTGGGCCGGATCTTAGTTGTCGCATTGGATATGTAGGCGGGGGGATCGGGGTGTGATTAGCATAGCGTAG]
consensusID : consensus_10051#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 787 fasta sequence
[GGCCGTGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAATCTCACTCTCCCCACTCGCGACACCGCTCTCCTCGCCGCCGCCGCCTCCCTCGCGAAGCTTCTGGCCTAGCCGGCGCAGCCATGGGGGATTGAGGGGAGCTGGCGGCGGAGAAACACGTCCGCTACATCGTCACCGTGGAGAAGGTAGGCCGCCTCTCGCTCGGATGCGAGCTGCTCGATGCGGCGGCTGATTCTGATTGGATGCTCTTCGCTGCTGCTGCTGCTGCTGTGATGCAGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCGACTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCACGCCGTAGAAGCCGACGAATTCATCGGGTGGATCATGTCCTGCTACCACCCGGATTCCGGATCCGCGAGAAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTGATGGTCTTGGGATCCTTGAGGGAGACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATTTGGGTGTTGTAGGTGGATTGGGGGGAAACGTTGGGCACGACGGGCATGTCCTTTACACGTTCAGCCCCGTGCACGTCCTGTGCCTCTTTGATCGGCTTAATGCTCTCGATGTCGATAAGGTTGCTGATTGTACCCTTTACTACTAGATCTTGACTGAGGTTCATCATGCTTGTGCAAACATTAGTTTATCAATGTCCAAATGAATTATAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF277623 [GGCCGTGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAATCTCACTCTCCCCACTCGCGACACCGCTCTCCTCGCCGCCGCCGCCTCCCTCGCGAAGCTTCTGGCCTAGCCGGCGCAGCCATGGGGGATTGAGGGGAGCTGGCGGCGGAGAAACACGTCCGCTACATCGTCACCGTGGAGAAGGTAGGCCGCCTCTCGCTCGGATGCGAGCTGCTCGATGCGGCGGCTGATTCTGATTGGATGCTCTTCGCTGCTGCTGCTGCTGCTGTGATGCAGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCGACTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCACGCCGTAGAAGCCGACGAATTCATCGGGTGGATCATGTCCTGCTACCACCCGGATTCCGGATCCGCGAGAAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTGATGGTCTTGGGATCCTTGAGGGAGACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATT ]
[-] EMBL CF277624 [ GATCCGCGAAAAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTAATGGTCTTGGGATCCTTAAGGGAAACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATTTGGGTGTTGTAGGTGGATTGGGGGGAAACGTTGGGCACGACGGGCATGTCCTTTACACGTTCAGCCCCGTGCACGTCCTGTGCCTCTTTGATCGGCTTAATGCTCTCGATGTCGATAAGGTTGCTGATTGTACCCTTTACTACTAGATCTTGACTGAGGTTCATCATGCTTGTGCAAACATTAGTTTATCAATGTCCAAATGAATTATAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10051#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence
[GGACACTAGATTCTCATACATTGCAATATGCACCCTCTCTTTGCTGCATCGGCTGGAAAAAATTAATGTGCAAAAAGCTGTTGATTATATTGTAAGCTGTAAGAACTTGGATGGTGGATTTGGAGCTATGCCAGGAGGTGAATCACACGCTGGGCAGATATTTTGTTGTGTTGGCGCTCTCGCAATCACTGGCTCGTTGCATCACATTGATAGAGATCTCCTTGGATGGTGGCTTTGTGAGCGTCAGTGCAAAGAGGGAGGGCTCAATGGACGGCCTGAGAAACTTGCTGATGTGTGCTACTCCTGGTGGGTGCTCTCAAGCTTGATAATGATTGATAGAGTGCACTGGATTGACAAGGACAAACTTGCAAAATTCATACTAAATTGCCAGGACAAGGAAAATGGTGGAATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGTTGCAGGTGTTTATATTTCTAACCGCAGTTCTTATCATAGCGATATATTATAGTGCGTGAATAAATTGAAACTATAGTCCCTTAGCNNANNCAGTTGGCCCTTTTTGNNNNNAGGGCTTTCACTGATNNAGTANNNNNNNNNGNNNNCCATGG]
[+] EMBL CF196809 [GGACACTAGATTCTCATACATTGCAATATGCACCCTCTCTTTGCTGCATCGGCTGGAAAAAATTAATGTGCAAAAAGCTGTTGATTATATTGTAAGCTGTAAGAACTTGGATGGTGGATTTGGAGCTATGCCAGGAGGTGAATCACACGCTGGGCAGATATTTTGTTGTGTTGGCGCTCTCGCAATCACTGGCTCGTTGCATCACATTGATAGAGATCTCCTTGGATGGTGGCTTTGTGAGCGTCAGTGCAAAGAGGGAGGGCTCAATGGACGGCCTGAGAAACTTGCTGATGTGTGCTACTCCTGGTGGGTGCTCTCAAGCTTGATAATGATTGATAGAGTGCACTGGATTGACAAGGACAAACTTGCAAAATTCATACTAAATTGCCAGGACAAGGAAAATGGTGGAATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGTTGCAGGTGTTTATATTTCTAACCGCAGTTCTTATCATAGCGATATATTATAGTGCGTGAATAAATTGAAACTATAGTCCCTTAGCNNANNCAGTTGGCCCTTTTTGNNNNNAGGGCTTTCACTGATNNAGTANNNNNNNNNGNNNNCCATGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10051#0 CCGTCGTTCGCGACACCGCTCTCCTCGCCGTCGCCGCCTCCGCCGCCGCCCTCGCGAAGC 60
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 TTCTGGTCCAACCGGCGCAGCCATGGGGGATGGAGGGGAGCTGGCGGCGGAGAAGCACGT 120
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 CCGCTACATCGTCACCGTGGAGAAGAGGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCA 180
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 CATCCGGCTCAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCG 240
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 CGCCGTGGAAGCCGACGAGGTCATCGAGTGGATCATGTCCTGCTACCACCCGGAATCCGG 300
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 TGGATTCGGGGGAAACGTTGGGCATGACGCGCATGTCCTCTACACGCTCAGCGCCGTGCA 360
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 GGTCCTGTGCCTCTTTGATCGGCTTGACGCTCTCGATGTCGATAAGGTTGCTGATTACAT 420
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 ------------------------------------GGCCGTGAATTCCCCTTGGACCTG 24
consensus_10051#0 TGCTGGGCTTCAAAATGAAGATGGATCATTTTCTGGTGATATTTGGGGTGAAGTGGACAC 480
consensus_10051#3 ------------------------------------------------------GGACAC 6
consensus_10051#1 -----------------------------------------------------TCGCCGC 7
consensus_10051#2 ACTGGACTGAAGGAGTAGAAATCTCACTCTCCCCACTCGCGACACCGCTCTCCTCGCCGC 84
* * *
consensus_10051#0 TAGATTCTCATACATTGCAATATGCACCCTCTCTTTGCTGCATCGG----CTGGAAAAAA 536
consensus_10051#3 TAGATTCTCATACATTGCAATATGCACCCTCTCTTTGCTGCATCGG----CTGGAAAAAA 62
consensus_10051#1 CGCCGCCTCCCTCGCGAAGCTTCTGGCCTAGCCGGCGCAGCCATGGGGGATTGAGGGGAG 67
consensus_10051#2 CGCCGCCTCCCTCGCGAAGCTTCTGGCCTAGCCGGCGCAGCCATGGGGGATTGAGGGGAG 144
*** * * ** * ** ** ** ** *
consensus_10051#0 TTAATG-TGCAAAAAGCTGTTGATTATATTGTAAGCTGTAAGAACTTGGATGG------- 588
consensus_10051#3 TTAATG-TGCAAAAAGCTGTTGATTATATTGTAAGCTGTAAGAACTTGGATGG------- 114
consensus_10051#1 CTGGCGGCGGAGAAACACGTCCGCTACATCGTCACCGTGGAGAAG--------------- 112
consensus_10051#2 CTGGCGGCGGAGAAACACGTCCGCTACATCGTCACCGTGGAGAAGGTAGGCCGCCTCTCG 204
* * * * *** ** ** ** ** * * ****
consensus_10051#0 -TGGATTTGGAGCTATGCCAGGAGGTGAATC----------------------------- 618
consensus_10051#3 -TGGATTTGGAGCTATGCCAGGAGGTGAATC----------------------------- 144
consensus_10051#1 ------------------------------------------------------------
consensus_10051#2 CTCGGATGCGAGCTGCTCGATGCGGCGGCTGATTCTGATTGGATGCTCTTCGCTGCTGCT 264
consensus_10051#0 ------------------ACACGCTGGGCAGATATTTTGTTGTGTTGGCGCTCTCGCAAT 660
consensus_10051#3 ------------------ACACGCTGGGCAGATATTTTGTTGTGTTGGCGCTCTCGCAAT 186
consensus_10051#1 ------------------AAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCG-ACT 153
consensus_10051#2 GCTGCTGCTGTGATGCAGAAGGACTCGTTCGAGTCGCTGGTGATGGAGCACATCCG-ACT 323
* ** * ** ** ** ** * ** * *
consensus_10051#0 CACTGGCTCGTT-----GCATCACATTGATAGAGATCTCCTTGGATGGTGGCTTTGTGAG 715
consensus_10051#3 CACTGGCTCGTT-----GCATCACATTGATAGAGATCTCCTTGGATGGTGGCTTTGTGAG 241
consensus_10051#1 CAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCACGCCGTAGA 213
consensus_10051#2 CAACGGCGCGTACTGGGGCCTCACCACGCTCGACCTCCTCCACAAGCTCCACGCCGTAGA 383
** *** *** ** **** * * ** ** * * * **
consensus_10051#0 CGTCAGTGCAAAGAGGGAGGGCTCAATGGACGGC--CTGAGAAACTTGCTGATGTGTGCT 773
consensus_10051#3 CGTCAGTGCAAAGAGGGAGGGCTCAATGGACGGC--CTGAGAAACTTGCTGATGTGTGCT 299
consensus_10051#1 AGCCGACGAATTCATCGGGTGGATCATGTCCTGCTACCACCCGGATTCCGGATCCGCGAG 273
consensus_10051#2 AGCCGACGAATTCATCGGGTGGATCATGTCCTGCTACCACCCGGATTCCGGATCCGCGAG 443
* * * * * * * * *** * ** * ** * *** * *
consensus_10051#0 ACTCCTGGTGGGTGCTCTCAA--GCTTGATAATGATTGATAGAGTGCACTGGAT---TGA 828
consensus_10051#3 ACTCCTGGTGGGTGCTCTCAA--GCTTGATAATGATTGATAGAGTGCACTGGAT---TGA 354
consensus_10051#1 AAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTGATGGTCTTGGGATCCTTGA 333
consensus_10051#2 AAGGGGAGGGGGCGGAATTGATTGATTGATTGTTGGTGGTGATGGTCTTGGGATCCTTGA 503
* * *** * * * * ***** * ** * * * **** ***
consensus_10051#0 CAAGGACAAACTTGCAA---AATTCATAC--TAAATTGCCAGGACAAGGAAAATGGTGG- 882
consensus_10051#3 CAAGGACAAACTTGCAA---AATTCATAC--TAAATTGCCAGGACAAGGAAAATGGTGG- 408
consensus_10051#1 GGGAGACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATTTGGGTGTTGTAGGT 393
consensus_10051#2 GGGAGACGTGTTCTTGACTTGATCTGTGCGTTTGGTTCTTCGGATTTGGGTGTTGTAGGT 563
*** * * ** * * * ** *** ** ** **
consensus_10051#0 AATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGT-TGCAG 941
consensus_10051#3 AATTTCAGATAGACCAGATAATGCGGTAGATATCTACCACACATACTTTGGAGT-TGCAG 467
consensus_10051#1 GGATTGAGGGGAAACGTTGGGCACGACGCGCATGTCCTCTACACGCTCAGCGCCGTGCAC 453
consensus_10051#2 GGATTGGGGGGAAACGTTGGGCACGACGGGCATGTCCTTTACACGTTCAGCCCCGTGCAC 623
** * * * ** ** * * *** * * ****
consensus_10051#0 GGCTTTCACTGATGGAGTACCCTGGAGTGAAACCCATGGACC-CTGCCTACGCGCTGCCG 1000
consensus_10051#3 GTGTTT----------ATATTTCTAACCGCAGTTCTT--ATC-ATAGCGATATATTATAG 514
consensus_10051#1 GTCCTGT---------GCCTCTTTGATCGGCTTGATGCTCTCGATGTCGATAAGGT-TGC 503
consensus_10051#2 GTCCTGT---------GCCTCTTTGATCGGCTTAATGCTCTCGATGTCGATAAGGT-TGC 673
* * * * * * * * *
consensus_10051#0 C---TGGATGTTGTCAACCGGATTTTCTTGAGAAAAGAACATTAGCATCTGCACGCTCCA 1057
consensus_10051#3 TGCGTGAATAAATTGAAACTATAGTCCCTTAGCNNANNCAGTTGGCCCTTTTTGNNNNNA 574
consensus_10051#1 TGATTGTATCCTTTACTACTAGA--TCTTGACTGAGGTTCATCATGCTTGTGCCAACCTT 561
consensus_10051#2 TGATTGTACCCTTTACTACTAGA--TCTTGACTGAGGTTCATCATGCTTGTGCAAACATT 731
** * * * * * * *
consensus_10051#0 CAGATCATGCTG-TGTAACATGGACAGGAACACGTGGTTTACTTGAAAAATCTGAAAATC 1116
consensus_10051#3 GGGCTTTCACTGATNNAGTANNNNNNNNNGNNNNCCATGG-------------------- 614
consensus_10051#1 AGTTTATCAATGTGCAAATGAATCTAGGGCATAAAAAAAAACTCATCAGATTAAATAGTG 621
consensus_10051#2 AGTTTATCAATGTCCAAATGAATTATAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA---- 787
* ** *
consensus_10051#0 ATCCCCATGGAAGAACGAATGCAGCATCAAATTCAAGTGGTAACTAGAATATGTTGTCAG 1176
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 TAAAGGTACAGGGATGAAGTGTTGCGTGTGGTGTTCCTCGTTCGCATGCGGGAGTCAGCC 681
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 GATATCGCGACCAAGCTTTCTTGAGAGTTGAGAGTCAACACCGACTTCACACTCAACAGC 1236
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 GGCCGAGCTCCTAGTCGTTCCTTTCGCTGTCTGGTGTGTTTTTGGTGGGTATCCAGCCTC 741
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 ATGCTTGTACTAACTGAAGTTGTACTGTTCTACGCAACGGCAAGCAATATTTTTTTTGTT 1296
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 CCGTTGGTGGGGTTTTTTTGTAGCCTTGTGTAATTGGTGTGTCGATGTGCGGTGCTGGGG 801
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 TATTAATTTTGAGACCGCGCGGTAAACAATTCTCTTGTAGTTGTATATTTCAATAAAATG 1356
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 ATTGATATGGTCGGCGCTGGCGACATGATTCTGGCGTGTGCCGTGCGCGGGGGCCGTGTG 861
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 TTTTTGCTGGAGCAAAAAAAAAAAAAAAAAAAAA-------------------------- 1390
consensus_10051#3 ------------------------------------------------------------
consensus_10051#1 AGCGTGGTCGTCCTTGGCGCTCTGGGCCGGATCTTAGTTGTCGCATTGGATATGTAGGCG 921
consensus_10051#2 ------------------------------------------------------------
consensus_10051#0 -------------------------------
consensus_10051#3 -------------------------------
consensus_10051#1 GGGGGATCGGGGTGTGATTAGCATAGCGTAG 952
consensus_10051#2 -------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||