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Oryza sativa
cluster # 10070 cluster # 10070       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10070#0 length = 1274 sequences # 2  
consensus_10070#1 length = 810 sequences # 4  
consensus_10070#2 length = 439 sequences # 1  

consensusID : consensus_10070#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1274
fasta sequence
                              [AGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCGAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTAGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGAGGCTGATATTGAAGAATTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTGAGCTGAAGTCAACAAAAGCATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCACAAACCCATTAGAGAGAAGAGTGAAGAAGAACAAGAAGAAGAGCGAGGAGAACGATCTGATCCTCGCGATCTCACAGCGCAGGGCGCAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAATGTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCCTTGTGGCTTGTGCAATTCTGTTTCATCGAGTTTGTTAACCAGGCCTATCTTTGACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCTATGTGAGATTGGCTGCTTCTGTTGTGGTGCAAGTTCAGGCTGGAATCTGAACTTCCTGCTCTTTTGCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAATGTTTCCTGGATGTGAACTTGTGATCTAGTTTCTGTATAAGTTAATCCAGTAGCTGTCTTGAGTTTTTACGCCTGTAAACGATATAAACAAGAATGCATCATCAACAGGGACGAGAGGCGGGTTTGCAATCTCGTTTTGGGGTTGGAAAAAAAACTTTAAAGAG]

[+] EMBL AK101350             [AGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCGAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTAGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGAGGCTGATATTGAAGAATTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTGAGCTGAAGTCAACAAAAGCATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCACAAACCCATTAGAGAGAAGAGTGAAGAAGAACAAGAAGAAGAGCGAGGAGAACGATCTGATCCTCGCGATCTCACAGCGCAGGGCGCAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAATGTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCCTTGTGGCTTGTGCAATTCTGTTTCATCGAGTTTGTTAACCAGGCCTATCTTTGACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCTATGTGAGATTGGCTGCTTCTGTTGTGGTGCAAGTTCAGGCTGGAATCTGAACTTCCTGCTCTTTTGCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAATGTTTCCTGGATGTGAACTTGTGATCTAGTTTCTGTATAAGTTAATCCAGTAGCTGTCTTGAGTTTTTACGCCTGTAAACGATATAAACAAGAATGCATCATCAACAGGGACGAGAGGCGGGTTTGCAATCTCGT                             ]
[-] EMBL CB684651             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGATTCCCATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTGAGCTGAAGTCAACAAAAGCATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCCCAAACCCATTAGAGAGAAGAGTGAAGAAGAACAAGAAGAAGAGCGAGGAGAACGATTTGATCCTTGCGATCTCACAGCGCAGGGCGCAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAATGTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCTCGGAAGAGGAGTTTGAGCAAGCTTGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCCTTGTGGCTTGTGCAATTCTGTTTCATCGAGTTTGTTAACCAGGCCTATCTTTGACAGATCAGATTGTTTGATATTTTGATCCCTAGTATCTATGTGAGATTGGCTGCTTTTGTTTTGGTGCAAGTTCAGGCTGGAATTTGAACTTCCTGGTCTTTTGCTGAAACTGGGGCCGATCTTTAGCATCGCTGCATATGTGTATAATCAAAATTTTAAATGTTTCCTGGATGTGAACTTGTGATTTAGTTTTTGTATAAGTTAATCCAGTAGCTGTCTTGAGTTTTTTCGCCTGTAAACGATATAAACAAGAATGCATCATCAACAGGGACGAGAGGAGGGGTTGCAATTTCGTTTTGGGGTTGGAAAAAAAACTTTAAAGAG]


>consensus_10070#0 AGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCC GCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCGAGAGCC TCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATC ACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGA AATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTAT ATGATGAGACTGGAATTGCTGATGATGATGCACTGGTAGGAGAAGCTGCAGACAATCTTC AAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGAGGCTGATATTGAAGAATTTGAAG CTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTA AAGGCAACATGAACAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCC ATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTGAGCTGAAGTCAACAAAAG CATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCACAAACCCATTAGAGA GAAGAGTGAAGAAGAACAAGAAGAAGAGCGAGGAGAACGATCTGATCCTCGCGATCTCAC AGCGCAGGGCGCAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAAT GTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCACGGAAGAGGAGTTTGAGCAAGCTCGTC AGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCCTTGT GGCTTGTGCAATTCTGTTTCATCGAGTTTGTTAACCAGGCCTATCTTTGACAGATCAGAT TGTCTGATATTCTGATCCCTAGTATCTATGTGAGATTGGCTGCTTCTGTTGTGGTGCAAG TTCAGGCTGGAATCTGAACTTCCTGCTCTTTTGCTGAAACTGGGGCCGATCTTTAGCATC ACTGCATATGTGTATAATCAAAATCTTAAATGTTTCCTGGATGTGAACTTGTGATCTAGT TTCTGTATAAGTTAATCCAGTAGCTGTCTTGAGTTTTTACGCCTGTAAACGATATAAACA AGAATGCATCATCAACAGGGACGAGAGGCGGGTTTGCAATCTCGTTTTGGGGTTGGAAAA AAAACTTTAAAGAG



consensusID : consensus_10070#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 810
fasta sequence
                              [CGAGCGCCAACCAAAAAGCGCGGGAAAAATTTCCCCGCACCCGCGCCATCTCCACCTATAAAGATCTCGCCGCCGCAGCCGCCTTCTCCTCTACACTACTAGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGA-GGCTGATA-TTGAAGAA-TTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGTGGCTTACAAAATTTAGTGATGATTAATTTTCTATACAGAAGGCAATGAATTGCAAGTGAATAATTGGGTTCCATTTCTATTTTAATTTGGTGCCCTTGGATGCAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAGGATATAATTGATGAGGCAATTGCTGCAGGTGAGCTGAAGTCAACAAAAGCAT]

[+] EMBL CB684650             [CGAGCGCCAACCAAAAAGCGCGGGAAAAATTTCCCCGCACCCGCGCCATCTCCACCTATAAAGATCTCGCCGCCGCAGCCGCCTTCTCCTCTACACTACTAGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGA GGCTGATA TTGAAGAA TTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGTGGCTTACAAAATTTAGTGATGATTAATTTTCTATACAGAAGGCAATGAATTGCAAGTGAATAATTGGGTTCCATTTCTATTTTAATTTGGTGCCCTTGGATGCAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAGGATATAATTGATGAGGCAATTGCTGCAGGTGAGCTGAAGTCAACAAAAGCAT]
[+] EMBL C28631               [                                                                                                                      GCTTCCACCAGATGGGCCGCAAGAGGAGGGNTAGGGTTTCCCGCGATGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTNGAATTGCTGATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGGTTACAAAAAGGTTACTTAGGGCTGATATTTGAAGAATTTTGAAGCTAAGTACc                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU181798             [                                                                                                                        TTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGA GGCTGATA TTGAAGAA TTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTAT                                                                                                                                                                                                                                                  ]
[+] EMBL AU166398             [                                                                                                                                                                   ACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGA GGCTGATA TTGAAGAA TTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTT                                                                                                                                                                                                                                       ]


>consensus_10070#1 CGAGCGCCAACCAAAAAGCGCGGGAAAAATTTCCCCGCACCCGCGCCATCTCCACCTATA AAGATCTCGCCGCCGCAGCCGCCTTCTCCTCTACACTACTAGTCCTCTTCACCCCGCCGC TTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAG GAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCAAGAGCCTCTACGAGATCTTAGGGGTT GAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTT CATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAG GTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCT GATGATGATGCACTGGTTGGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTT TACAAAAAGGTTACTGAGGCTGATATTGAAGAATTTGAAGCTAAGTACAGAGGGTCAGAT TCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGTGG CTTACAAAATTTAGTGATGATTAATTTTCTATACAGAAGGCAATGAATTGCAAGTGAATA ATTGGGTTCCATTTCTATTTTAATTTGGTGCCCTTGGATGCAGGCTTTTTTGTTCAATGA TTTGCTCAGATCCAAAGCTTGATTCCCATCGCTTTAAGGATATAATTGATGAGGCAATTG CTGCAGGTGAGCTGAAGTCAACAAAAGCAT



consensusID : consensus_10070#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [CACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCCTTGTGGCTTGTGCAATTCTGTTTCATCGAGTTTGTTAACCAGGCCTATCTTTGACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCTATGTGAGATTGGCTGCTTCTGTTGTGGTGCAAGTTCAGGCTGGAATCTGAACTTCCTGCTCTTTTGCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAATGTTTCCTGGATGTGAACTTGTGATCTAGTTTCTGTATAAGTTAATCCAGTAGCTGTCTTGAGTTTTTACGCCTGTAAACGATATAAACAAGAATGCATCATCAACAGGGACGAGAGGCGGGTTTGCAAAAAAAAAAAAA]

[+] EMBL AU166399             [CACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCCTTGTGGCTTGTGCAATTCTGTTTCATCGAGTTTGTTAACCAGGCCTATCTTTGACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCTATGTGAGATTGGCTGCTTCTGTTGTGGTGCAAGTTCAGGCTGGAATCTGAACTTCCTGCTCTTTTGCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAATGTTTCCTGGATGTGAACTTGTGATCTAGTTTCTGTATAAGTTAATCCAGTAGCTGTCTTGAGTTTTTACGCCTGTAAACGATATAAACAAGAATGCATCATCAACAGGGACGAGAGGCGGGTTTGCAAAAAAAAAAAAA]


>consensus_10070#2 CACGGAAGAGGAGTTTGAGCAAGCTCGTCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCG CAAATGATTCGCCTTGCAGCCTCCCTTGTGGCTTGTGCAATTCTGTTTCATCGAGTTTGT TAACCAGGCCTATCTTTGACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCTATGT GAGATTGGCTGCTTCTGTTGTGGTGCAAGTTCAGGCTGGAATCTGAACTTCCTGCTCTTT TGCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAAT GTTTCCTGGATGTGAACTTGTGATCTAGTTTCTGTATAAGTTAATCCAGTAGCTGTCTTG AGTTTTTACGCCTGTAAACGATATAAACAAGAATGCATCATCAACAGGGACGAGAGGCGG GTTTGCAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10070#0      AGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCAAGAGGAGGGCTAGGGTTTCCC 60
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      GCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGGTCGCCGCAGAGAGCGAGAGCC 120
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      TCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAGCAGGAAATAAAGAAGGCTTATC 180
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      ACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCTGGAGATGAGGAAGCCAAGGAGA 240
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      AATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGGGATGAGGAGAAAAGGGCATTAT 300
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      ATGATGAGACTGGAATTGCTGATGATGATGCACTGGTAGGAGAAGCTGCAGACAATCTTC 360
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      AAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGAGGCTGATATTGAAGAATTTGAAG 420
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      CTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTGAAGGATCTATATACAAAATTTA 480
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      AAGGCAACATGAACAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGCTTGATTCCC 540
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      ATCGCTTTAAAGATATAATTGATGAGGCAATTGCTGAAGGTGAGCTGAAGTCAACAAAAG 600
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      ------------------------------------------------------------
                                                                                   

consensus_10070#0      CATATGATAAATGGGCCAAGAAGATCTCCGAGATTGAACCTCCCACAAACCCATTAGAGA 660
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      -----------------------------------------CGAGCGCCAACCAAAAAGC 19
                                                                                   

consensus_10070#0      GAAGAGTGAAGAAGAACAAGAAGAAGAGCGAGGAGAACGATCTGATCCTCGCGATCTCAC 720
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      GCGGGAAAAATTTCCCCGCACCCGCGCCATCTCCACCTATAAAGATCTCGCCGCCGCAGC 79
                                                                                   

consensus_10070#0      AGCGCAGGGCGCAGCGGAAGGACCGGTTCGACTCGGTGCTCTCATCCATCATGTCCAAAT 780
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      CGCCTTCTCCTCTACACTACTAGTCCTCTTCACCCCGCCGCTTCCACCAGATGGGCCGCA 139
                                                                                   

consensus_10070#0      GTGACCCAAAGGGGAGCAGCAGCTCGGAGCCCACGGAAGAGGAGTTTGAGCAAGCTC--G 838
consensus_10070#2      -------------------------------CACGGAAGAGGAGTTTGAGCAAGCTC--G 27
consensus_10070#1      AGAGGAGGGCTAGGGTTTCCCGCGACGGCGACGGCGAGGAGGAGGAGGAGCCCGCGCCGG 199
                                                      *   ** ******   ****  ** *  *

consensus_10070#0      TCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCC-- 896
consensus_10070#2      TCAGAGGCTCGAGAAAAAGCGTTCCAAGAACCGCAAATGATTCGCCTTGCAGCCTCCC-- 85
consensus_10070#1      TCGCCGCAGAGAGCAAGAGC-CTCTACGAGATCTTAGGGGTTGAGAGGACAGCTTCACAG 258
                       **   *    *** ** ***  ** * **      *  * **       **** ** *  

consensus_10070#0      TTGTGGCTTGTGCAATTCTGTTTCA--TCGAGTTTG-----TTAACCAGGCCTATCTTTG 949
consensus_10070#2      TTGTGGCTTGTGCAATTCTGTTTCA--TCGAGTTTG-----TTAACCAGGCCTATCTTTG 138
consensus_10070#1      CAGGAAATAAAGAAGGCTTATCACAAGTTGGCCTTACGTCTTCATCCAGACAAGAATCCT 318
                         *    *   * *    * *  **  * *   **      * * **** *     *   

consensus_10070#0      ACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCT--ATGTGAGATTGGCTGCTTCT 1007
consensus_10070#2      ACAGATCAGATTGTCTGATATTCTGATCCCTAGTATCT--ATGTGAGATTGGCTGCTTCT 196
consensus_10070#1      GGAGATGAGGAAGCCAAGGAGAAATTTCAGCAGCTTCAGAAGGTGATATCTATTCTTGGG 378
                         **** **   * *    *      **   **  **   * **** **    *  *   

consensus_10070#0      GTTGTGGTGCAA------------GTTCAGGCTGGAAT--CTGAACTTCCTGCTCTT-TT 1052
consensus_10070#2      GTTGTGGTGCAA------------GTTCAGGCTGGAAT--CTGAACTTCCTGCTCTT-TT 241
consensus_10070#1      GATGAGGAGAAAAGGGCATTATATGATGAGACTGGAATTGCTGATGATGATGCACTGGTT 438
                       * ** ** * **            * * ** *******  ****   *  *** **  **

consensus_10070#0      GCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAATG 1112
consensus_10070#2      GCTGAAACTGGGGCCGATCTTTAGCATCACTGCATATGTGTATAATCAAAATCTTAAATG 301
consensus_10070#1      GGAGAAGCTGCAGACAATCTTCAAGAGTACTTCAGAGCTGTTTACAAAAAGGTTACTGAG 498
                       *  *** ***  * * ***** *  *  *** ** *  *** **   ***   *     *

consensus_10070#0      TTTCCTGGATGTGAACTTGTGATCTAGTTTCT-GTATAAGTTAATCCAGTAGCTGTCTTG 1171
consensus_10070#2      TTTCCTGGATGTGAACTTGTGATCTAGTTTCT-GTATAAGTTAATCCAGTAGCTGTCTTG 360
consensus_10070#1      GCTGATATTGAAGAATTTGAAGCTAAGTACAGAGGGTCAGATTCTGAAAAAAAGGACTTG 558
                         *  *      *** ***      ***     *  * ** *  *  *  *   * ****

consensus_10070#0      AG---TTTTTACGC-----CTGTAAACGATATAAACAAG-AATGCATCATCAACAGGGAC 1222
consensus_10070#2      AG---TTTTTACGC-----CTGTAAACGATATAAACAAG-AATGCATCATCAACAGGGAC 411
consensus_10070#1      AAGGATCTATATACAAAATTTAAAGGCAACATGAACAGGTGGCTTACAAAATTTAGTGAT 618
                       *    * * **  *      *  *  * * ** **** *      *  *     ** ** 

consensus_10070#0      GAGAGGCGGGTT-TGCAATCTCGTTTTGGGGTTGGAAAAAAAACTTTAAAGAG------- 1274
consensus_10070#2      GAGAGGCGGGTT-TGCAAA--------------AAAAAAAAAA----------------- 439
consensus_10070#1      GATTAATTTTCTATACAGAAGGCAATGAATTGCAAGTGAATAATTGGGTTCCATTTCTAT 678
                       **         * * **                     ** **                 

consensus_10070#0      ------------------------------------------------------------
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      TTTAATTTGGTGCCCTTGGATGCAGGCTTTTTTGTTCAATGATTTGCTCAGATCCAAAGC 738
                                                                                   

consensus_10070#0      ------------------------------------------------------------
consensus_10070#2      ------------------------------------------------------------
consensus_10070#1      TTGATTCCCATCGCTTTAAGGATATAATTGATGAGGCAATTGCTGCAGGTGAGCTGAAGT 798
                                                                                   

consensus_10070#0      ------------
consensus_10070#2      ------------
consensus_10070#1      CAACAAAAGCAT 810
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)