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Oryza sativa
cluster # 10073 cluster # 10073       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10073#0 length = 2023 sequences # 3  
consensus_10073#1 length = 1389 sequences # 3  
consensus_10073#2 length = 299 sequences # 1  

consensusID : consensus_10073#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2023
fasta sequence
                              [AAGAGCAAGAAGAGGAGAGGAGAGGAGTTGGAAGGTAGAGAGAGACAAGCCATCATTAGCCACCAAATGCAGGCATGCATCATATAGCTGACAGGACAAGAATCAGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGATGCTCGCGCCGCTTCTTGGCGCCGGCCGGTCGGCGTGGACGGCGCACGACGGCGGCGGCGGCGGCGGAGAAGCCGTGGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGACGACGGACTTCGTCACCTGCCCGTACCACTACTACTGCGACAGCTCGTACCCGGGCGACTACCACGCCGCCGTCGGCGTGC-TCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGCTCGCGTTCACGGTGCTCGACCTGGCGAGGAGCGGCGGCGGCGGCGGCGGCGCGGGCGGGGTGAGGGGGATCAGGAGGAAGTACCTGCTCCCGTCGGGGCCGTTCCTGCTGCCGCTGGTGCTGCTCGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCGTCCACCGTCTCCGGCGTGCTGCACGCCAGCCTGTACCTCGACGCCGTCGTGCTCCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTGCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGTGTTCGTGGCGGCCGACGCCGTCTACCTCGTCGGCTGGGTCGCCATCGAGGGCGGCGCCGTCGCCGTGCTGGCGTACAGCCTCGTCGCCGGCCTCGTCTTCCTCAGCGTCTTCGGCAAGGTCTACAGATTCTTGGCATGGTTGGAGACGAGACAATCTCAATGGAAATCAAGCCTCTGCCATAGCGCTGTATGATACTACTACTCGTCAGAAAAAAAAAATCTGTAAAAAGAAAAAGGAAACCATTTCTTAGCTCACCTTTTGTTCATTTGTACAATGATTCACACAATGAGAAAACCACAGTTGTAATTTTTTTTTCATGCTTATATATAGGTTCTCTGAAACAAATTTGTTCAATTCTTGGACAAGTTTTCTGAAGCCATTCTGAACTTTTTCTGATGAATCTTCAGAGTTTCTTTTCCATTTTTCGATAGGGTGTTTGAGAGCAGCTTCCTGATTATAGCACACATTAGATATTCAGCTTCGAATTAGGCACGTGTACTACACTTTTGGGGTATAATTAGTTTGAACCTCCGATTTGGCATAAGCATGTCCGGGTTAGTACCCTTAGGTTAGGTCAGAGTGCCACCATTTTGGCAGATGAGAATGGTGCCATGAGAAGTGAATGGGACAAACCGGCAATGATGCAGTGACAATGTGGTGGTTCAGGACATGTCAAGTTTGATCAAGCAAGGACATCACAACTGATGGCTTCTGCGAGCCAGTTCTTGGAGGCTTCCTCTCTGAGAATTGTTTCCTTATGCTCTTTCTCGTTGTCAGCTTGTCATCAATCAATCCTTCACCAGTTTGAGCCGAAGTGGTTGGAGCGTGGTTGGAGCTTTCACCTGATGTCTCACCTGGTTGCGATTTGAGCCAATGCAAGAACAGCACATAAGTACATACTCACTGCAGTAAACTGATGCAAGGACTGCAGAGAATCTGATTCTGATGAAATGAAATTGAAGGGTGGCGACAATGAGTTTTAGAAGTGATAGTAAATGTACTTTTGTCGCATAGTATTTGGCCCTACAATTCGATCTGCAATGAACAAAGTGTT]

[+] EMBL AK119506             [AAGAGCAAGAAGAGGAGAGGAGAGGAGTTGGAAGGTAGAGAGAGACAAGCCATCATTAGCCACCAAATGCAGGCATGCATCATATAGCTGACAGGACAAGAATCAGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGATGCTCGCGCCGCTTCTTGGCGCCGGCCGGTCGGCGTGGACGGCGCACGACGGCGGCGGCGGCGGCGGAGAAGCCGTGGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGACGACGGACTTCGTCACCTGCCCGTACCACTACTACTGCGACAGCTCGTACCCGGGCGACTACCACGCCGCCGTCGGCGTGC TCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGCTCGCGTTCACGGTGCTCGACCTGGCGAGGAGCGGCGGCGGCGGCGGCGGCGCGGGCGGGGTGAGGGGGATCAGGAGGAAGTACCTGCTCCCGTCGGGGCCGTTCCTGCTGCCGCTGGTGCTGCTCGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCGTCCACCGTCTCCGGCGTGCTGCACGCCAGCCTGTACCTCGACGCCGTCGTGCTCCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTGCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGTGTTCGTGGCGGCCGACGCCGTCTACCTCGTCGGCTGGGTCGCCATCGAGGGCGGCGCCGTCGCCGTGCTGGCGTACAGCCTCGTCGCCGGCCTCGTCTTCCTCAGCGTCTTCGGCAAGGTCTACAGATTCTTGGCATGGTTGGAGACGAGACAATCTCAATGGAAATCAAGCCTCTGCCATAGCGCTGTATGATACTACTACTCGTCAGAAAAAAAAAATCTGTAAAAAGAAAAAGGAAACCATTTCTTAGCTCACCTTTTGTTCATTTGTACAATGATTCACACAATGAGAAAACCACAGTTGTAATTTTTTTTTCATGCTTATATATAGGTTCTCTGAAACAAATTTGTTCAATTCTTGGACAAGTTTTCTGAAGCCATTCTGAACTTTTTCTGATGAATCTTCAGAGTTTCTTTTCCATTTTTCGATAGGGTGTTTGAGAGCAGCTTCCTGATTATAGCACACATTAGATATTCAGCTTCGAATTAGGCACGTGTACTACACTTTTGGGGTATAATTAGTTTGAACCTCCGATTTGGCATAAGCATGTCCGGGTTAGTACCCTTAGGTTAGGTCAGAGTGCCACCATTTTGGCAGATGAGAATGGTGCCATGAGAAGTGAATGGGACAAACCGGCAATGATGCAGTGACAATGTGGTGGTTCAGGACATGTCAAGTTTGATCAAGCAAGGACATCACAACTGATGGCTTCTGCGAGCCAGTTCTTGGAGGCTTCCTCTCTGAGAATTGTTTCCTTATGCTCTTTCTCGTTGTCAGCTTGTCATCAATCAATCCTTCACCAGTTTGAGCCGAAGTGGTTGGAGCGTGGTTGGAGCTTTCACCTGATGTCTCACCTGGTTGCGATTTGAGCCAATGCAAGAACAGCACATAAGTACATACTCACTGCAGTAAACTGATGCAAGGACTGCAGAGAATCTGATTCTGATGAAATGAAATTGAAGGGTGGCGACAATGAGTTTTAGAAGTGATAGTAAATGTACTTTTGTCGCATAGTATTTGGCCCTACAATTCGATCTGCAATGAACAAAGTGTT]
[+] EMBL C74833               [                                               AGCCATCATTAGCCACCAAATGCAGGCATGCATCATATAGCTGACAGGACAAGAATCAGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGATGCTCGCGCCGCTTCTTGGNGCCGGCCGGTCGGCGTGGACGGCGCACGACGGCGGCGGCGGCGGCGGAGAAGCCGTGGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGACGACGGACTTCGTCACCTGCCCGTACCACTACTACTGCGACA CTCGTACCCGGGCGACTACCACGCCGCCGTCGG GTGCTTCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGCTCGCGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK061138             [                                                                                                                         AGGAGGAGGAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGATGCTCGCGCCGCTTCTTGGCGCCGGCCGGTCGGCGTGGACGGCGCACGA   CGGCGGCGGCGGCGGAGAAGCCGTGGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGACGACGGACTTCGTCACCTGCCCGTACCACTACTACTGCGACAGCTCGTACCCGGGCGACTACCACGCCGCCGTCGGCGTGC TCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGCTCGCGTTCACGGTGCTCGACCTGGCGAGGAGCGGCGGCGGCGGCGGCGGCGCGGGCGGGGTGAGGGGGATCAGGAGGAAGTACCTGCTCCCGTCGGGGCCGTTCCTGCTGCCGCTGGTGCTGCTCGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCGTCCACCGTCTCCGGCGTGCTGCACGCCAGCCTGTACCTCGACGCCGTCGTGCTCCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTGCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCAGATTTACGGCGAGGAGCGGCTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGTGTTCGTGGCGGCCGACGCCGTCTACCTCGTCGGCTGGGTCGCCATCGAGGGCGGCGCCGTCGCCGTGCTGGCGTACAGCCTCGTCGCCGGCCTCGTCTTCCTCAGCGTCTTCGGCAAGGTCTACAGATTCTTGGCATGGTTGGAGACGAGACAATCTCAATGGAAATCAAGCCTCTGCCATAGCGCTGTATGATACTACTACTCGTCAG AAAAAAAAATCTGTAAAAAGAAAAAGGAAACCATTTCTTAGCTCACCTTTTGTTCATTTGTACAATGATTCACACAATGAGAAAACCACAGTTGTAATTTTTTTTTCATGCTTATATATAAGTTCTCTGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_10073#0 AAGAGCAAGAAGAGGAGAGGAGAGGAGTTGGAAGGTAGAGAGAGACAAGCCATCATTAGC CACCAAATGCAGGCATGCATCATATAGCTGACAGGACAAGAATCAGAGGAAGAAGAAGAG GAGGAGGAGGAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGATGCTCGCG CCGCTTCTTGGCGCCGGCCGGTCGGCGTGGACGGCGCACGACGGCGGCGGCGGCGGCGGA GAAGCCGTGGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGACGACGGAC TTCGTCACCTGCCCGTACCACTACTACTGCGACAGCTCGTACCCGGGCGACTACCACGCC GCCGTCGGCGTGCTCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGCTCGCGTTC ACGGTGCTCGACCTGGCGAGGAGCGGCGGCGGCGGCGGCGGCGCGGGCGGGGTGAGGGGG ATCAGGAGGAAGTACCTGCTCCCGTCGGGGCCGTTCCTGCTGCCGCTGGTGCTGCTCGTG CTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTG CTGCTGCTGCTGCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGG TACGCGGTGCTGGAGGCGTCCACCGTCTCCGGCGTGCTGCACGCCAGCCTGTACCTCGAC GCCGTCGTGCTCCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGC GAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTGCGG TACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTG TGCCGGATTTACGGCGAGGAGCGGCTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCC GGCTGGGTGTTCGTGGCGGCCGACGCCGTCTACCTCGTCGGCTGGGTCGCCATCGAGGGC GGCGCCGTCGCCGTGCTGGCGTACAGCCTCGTCGCCGGCCTCGTCTTCCTCAGCGTCTTC GGCAAGGTCTACAGATTCTTGGCATGGTTGGAGACGAGACAATCTCAATGGAAATCAAGC CTCTGCCATAGCGCTGTATGATACTACTACTCGTCAGAAAAAAAAAATCTGTAAAAAGAA AAAGGAAACCATTTCTTAGCTCACCTTTTGTTCATTTGTACAATGATTCACACAATGAGA AAACCACAGTTGTAATTTTTTTTTCATGCTTATATATAGGTTCTCTGAAACAAATTTGTT CAATTCTTGGACAAGTTTTCTGAAGCCATTCTGAACTTTTTCTGATGAATCTTCAGAGTT TCTTTTCCATTTTTCGATAGGGTGTTTGAGAGCAGCTTCCTGATTATAGCACACATTAGA TATTCAGCTTCGAATTAGGCACGTGTACTACACTTTTGGGGTATAATTAGTTTGAACCTC CGATTTGGCATAAGCATGTCCGGGTTAGTACCCTTAGGTTAGGTCAGAGTGCCACCATTT TGGCAGATGAGAATGGTGCCATGAGAAGTGAATGGGACAAACCGGCAATGATGCAGTGAC AATGTGGTGGTTCAGGACATGTCAAGTTTGATCAAGCAAGGACATCACAACTGATGGCTT CTGCGAGCCAGTTCTTGGAGGCTTCCTCTCTGAGAATTGTTTCCTTATGCTCTTTCTCGT TGTCAGCTTGTCATCAATCAATCCTTCACCAGTTTGAGCCGAAGTGGTTGGAGCGTGGTT GGAGCTTTCACCTGATGTCTCACCTGGTTGCGATTTGAGCCAATGCAAGAACAGCACATA AGTACATACTCACTGCAGTAAACTGATGCAAGGACTGCAGAGAATCTGATTCTGATGAAA TGAAATTGAAGGGTGGCGACAATGAGTTTTAGAAGTGATAGTAAATGTACTTTTGTCGCA TAGTATTTGGCCCTACAATTCGATCTGCAATGAACAAAGTGTT



consensusID : consensus_10073#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1389
fasta sequence
                              [AAGAACAGAAGAGAGCAGAACAGAGCAAAGGGAATGGAATGGATCATTAAGAGAGAGATGATGATGAGTGAGCAGTGAGCAGCTGCCGACGGAAAGAAGCCATCATTAGGCACCAAATGCAGCATGCACATGCTTAGCAGCATCAGCTGCTGCCGGCCAGGGGAGACAAGAAAACAGAGGAGAAGAAGAAGAAGAAGAGGAAAGCCATCGTCATCATCGTGTCGTGATTAGAATCCGGCCATGTCGACAGCAGAAGCAGCCGTGTGGAGGGGCCATGGCAGCAGCAACATCACGCGGCAAATCCTCAAGTGCACGAGGTGGCAGCTGGAGGAGACCACGGACTTCATCACATGCCCCTACCACTACTACTGCGACAG-GCCTACCCCGGCGACTACTCCCCCGCCGTCGGCGCGCTCGTCGCCGCCTTCGCCGCGTACTGCCTCGTTTCCGCCGCCGCATTCGCCGTACTGGACATCGGCAGGGCCGGCGGCGGCGGCGGGAGGAATAGGCGGAAGTACATGGTGCCGTCGGGCCCATTCTTGCTGCCGGTGGTGCTCCTGGCGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGACGCTGCAGGCGTCGGCGCTGGCTTTCCGGAACGAGGCCGACGGCGACCTCCGGTACGCGGTGCTGGAGGCGTCCACCGTGTCCGGGATCCTTCACGCCAGCCTCTACCTCGACGCCGTCGTTCTGCCGTACTACACCGGCACCGACGCGCTCCGGTGGTCGCGGTTCTCCGGCGAGTGCGCCACATGCCTCTGCCGGATGGACCCGCTCGTCGTCGGCGGCCGGACGGTGCTCTACCGGGGCCTGTCCAAGACGGCTCTCGCCATCATCTTCGCGCTCTGCTCCCGGATGGTGTGCCGGATCTACGGCGAGGAGCGGGTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCGAGCTGGGTGTTCGTCGCCGGCGACGCCGTGTACCTCGCCGGGTGGGCGTTCGCGGAGGGCGCCGCGGCGAGCGTCGCGGCGTACGCTCTCGTGGCCGGCCTGGTGTTCCTGTGCATTTTTGGTAAGGTGTACAAGTTCTTGGCTTGGATGGAGACGAGGCAGGTGCAGTGGAAACCAAGCGTCAGCTGCCACAGTAATGTGGTTTGATCATTAATTTCTTTTCTTTTTTCGTTTTTTGGATCGAGTTGTTTCTTTCTTTGATTCACAGGAAATTGTAAAGCATAAATGCATAATAACCCATTAATTCAGGTTTTGTGTGTATAACAAGGAAAAGAGATTTAACACTGCATATATGCTGTGGAGATTTGCATTTCTAACGTATTCCGCAAAACTCTGGAGATTTTTT]

[+] EMBL AU077862             [AAGAACAGAAGAGAGCAGAACAGAGCAAAGGGAATGGAATGGATCATTAAGAGAGAGATGATGATGAGTGAGCAGTGAGCAGCTGCCGACGGAAAGAAGCCATCATTAGGCACCAAATGCAGCATGCACATGCTTAGCAGCATCAGCTGCTGCCGGCCAGGGGAGACAAGAAAACAGAGGAGAAGAAGAAGAAGAAGAGGAAAGCCATCGTCATCATCGTGTCGTGATTAGAATCCGGCCATGTCGACAGCAGAAGCAGCCGTGTGGAGGGGCCATGGCAGCAGCAACATCACGCGGCAAATCCTCAAGTGCACGAGGTGGCAGCTGGAGGAGACCACGGACTTCATCACATGCCCCTACCACTACTACTGCGACAG GCCTACCCCGGCGACTACTCCCCCGCCGTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK061523             [                                                                                  CTGCCGACGGAAAGAAGCCATCATTAGGCACCAAATGCAGCATGCACATGCTTAGCAGCATCAGCTGCTGCCGGCCAGGGGAGACAAGAAAACAGAGGAGAAGAAGAAGAAGAAGAGGAAAGCCATCGTCATCATCGTGTCGTGATTAGAATCCGGCCATGTCGACAGCAGAAGCAGCCGTGTGGAGGGGCCATGGCAGCAGCAACATCACGCGGCAAATCCTCAAGTGCACGAGGTGGCAGCTGGAGGAGACCACGGACTTCATCACATGCCCCTACCACTACTACTGCGACAGCGCCTACCCCGGCGACTACTCCCCCGCCGTCGGCGCGCTCGTCGCCGCCTTCGCCGCGTACTGCCTCGTTTCCGCCGCCGCATTCGCCGTACTGGACATCGGCAGGGCCGGCGGCGGCGGCGGGAGGAATAGGCGGAAGTACATGGTGCCGTCGGGCCCATTCTTGCTGCCGGTGGTGCTCCTGGCGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGACGCTGCAGGCGTCGGCGCTGGCTTTCCGGAACGAGGCCGACGGCGACCTCCGGTACGCGGTGCTGGAGGCGTCCACCGTGTCCGGGATCCTTCACGCCAGCCTCTACCTCGACGCCGTCGTTCTGCCGTACTACACCGGCACCGACGCGCTCCGGTGGTCGCGGTTCTCCGGCGAGTGCGCCACATGCCTCTGCCGGATGGACCCGCTCGTCGTCGGCGGCCGGACGGTGCTCTACCGGGGCCTGTCCAAGACGGCTCTCGCCATCATCTTCGCGCTCTGCTCCCGGATGGTGTGCCGGATCTACGGCGAGGAGCGGGTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCGAGCTGGGTGTTCGTCGCCGGCGACGCCGTGTACCTCGCCGGGTGGGCGTTCGCGGAGGGCGCCGCGGCGAGCGTCGCGGCGTACGCTCTCGTGGCCGGCCTGGTGTTCCTGTGCATTTTTGGTAAGGTGTACAAGTTCTTGGCTTGGATGGAGACGAGGCAGGTGCAGTGGAAACCAAGCGTCAGCTGCCACAGTAATGTGGTTTGATCATTAATTTCTTTTCTTTTTTCGTTTTTTGGATCGAGTTGTTTCTTTCTTTGATTCACAGGAAATTGTAAAGCATAAATGCATAATAACCCATTAATTCAGGTTTTGTGTGTATAACAAGGAAAAGAGATTTAACACTGCATATATGCTGTGGAGATTTGCATTTCTAACGTATTCCGCAAAACTCTGGAGATTTTTT]
[+] EMBL AU077863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTCCGGCGAGTGCGCNACATGCCTCTGCCGGATGGACCCGCTCGTCGTCGGCGGCCGGACGGTGCTCTACCGGGGCCTGTCCAAGAC GCTCTCGCCATCATCTTCGCG TCTGCTCCCGGATGGTGTGCCGGATCTACGGCGAGGANCGGGTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCNCGAGCTGGGTGTTCGTCGCCGGCGACGCCGTGTACCTCGCCGGGTGGGCGTTCGCGGAGGGCGCCGCGGCGAGCGTCGCGGCGTACGCTCTCGTGGCCGGCCTGGTGTTCCTGTGCATTTTTGGTAAGGTGTACAAGTTCTTGGCTTGGATGGAGACGAGGCAGGTGCAGTGGAAACCAAGCGTCAGCTGCCACAGTAATGTGGTTTGATCATTAATTTCTTTTCTTTTTTCGTTTTTTGGATCGAGTTGTTTCTTTCTTTGATTCACAGGAAATTGTAAAGCATAAATGCATAATAACCCATTAATTCAGGTTTTGTGTGTAAAAAAAaaa                                                                            ]


>consensus_10073#1 AAGAACAGAAGAGAGCAGAACAGAGCAAAGGGAATGGAATGGATCATTAAGAGAGAGATG ATGATGAGTGAGCAGTGAGCAGCTGCCGACGGAAAGAAGCCATCATTAGGCACCAAATGC AGCATGCACATGCTTAGCAGCATCAGCTGCTGCCGGCCAGGGGAGACAAGAAAACAGAGG AGAAGAAGAAGAAGAAGAGGAAAGCCATCGTCATCATCGTGTCGTGATTAGAATCCGGCC ATGTCGACAGCAGAAGCAGCCGTGTGGAGGGGCCATGGCAGCAGCAACATCACGCGGCAA ATCCTCAAGTGCACGAGGTGGCAGCTGGAGGAGACCACGGACTTCATCACATGCCCCTAC CACTACTACTGCGACAGGCCTACCCCGGCGACTACTCCCCCGCCGTCGGCGCGCTCGTCG CCGCCTTCGCCGCGTACTGCCTCGTTTCCGCCGCCGCATTCGCCGTACTGGACATCGGCA GGGCCGGCGGCGGCGGCGGGAGGAATAGGCGGAAGTACATGGTGCCGTCGGGCCCATTCT TGCTGCCGGTGGTGCTCCTGGCGCTCGCCAAGGGGCAGCGGATCAACGCCGTGTTCCCGC TCGCGCAGCTCGGCCCGGCATTGCTGCTGACGCTGCAGGCGTCGGCGCTGGCTTTCCGGA ACGAGGCCGACGGCGACCTCCGGTACGCGGTGCTGGAGGCGTCCACCGTGTCCGGGATCC TTCACGCCAGCCTCTACCTCGACGCCGTCGTTCTGCCGTACTACACCGGCACCGACGCGC TCCGGTGGTCGCGGTTCTCCGGCGAGTGCGCCACATGCCTCTGCCGGATGGACCCGCTCG TCGTCGGCGGCCGGACGGTGCTCTACCGGGGCCTGTCCAAGACGGCTCTCGCCATCATCT TCGCGCTCTGCTCCCGGATGGTGTGCCGGATCTACGGCGAGGAGCGGGTCAGCGCGTGGA CGCGGTCGGCGCTGGAGGCCGCGAGCTGGGTGTTCGTCGCCGGCGACGCCGTGTACCTCG CCGGGTGGGCGTTCGCGGAGGGCGCCGCGGCGAGCGTCGCGGCGTACGCTCTCGTGGCCG GCCTGGTGTTCCTGTGCATTTTTGGTAAGGTGTACAAGTTCTTGGCTTGGATGGAGACGA GGCAGGTGCAGTGGAAACCAAGCGTCAGCTGCCACAGTAATGTGGTTTGATCATTAATTT CTTTTCTTTTTTCGTTTTTTGGATCGAGTTGTTTCTTTCTTTGATTCACAGGAAATTGTA AAGCATAAATGCATAATAACCCATTAATTCAGGTTTTGTGTGTATAACAAGGAAAAGAGA TTTAACACTGCATATATGCTGTGGAGATTTGCATTTCTAACGTATTCCGCAAAACTCTGG AGATTTTTT



consensusID : consensus_10073#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 299
fasta sequence
                              [AGGAGAGGAGTTGGGAGGTAGAGAGAGAAAATCCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTNCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCANCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGTGTTCGTGGCGGNCGACGNCGTCTACCTCGTCGGCTGGGTCGCCAT]

[+] EMBL OS1321743            [AGGAGAGGAGTTGGGAGGTAGAGAGAGAAAATCCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTNCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCANCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGTGTTCGTGGCGGNCGACGNCGTCTACCTCGTCGGCTGGGTCGCCAT]


>consensus_10073#2 AGGAGAGGAGTTGGGAGGTAGAGAGAGAAAATCCTGGAGGCGCTCCGGTGGTCGCAGTTT TCCGGCGAGTGCGCGACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCG GTNCGGTACCGCGGCCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGG ATGGTGTGCCGGATTTACGGCGAGGAGCGGCTCANCGCGTGGACGCGGTCGGCGCTGGAG GCCGCCGGCTGGGTGTTCGTGGCGGNCGACGNCGTCTACCTCGTCGGCTGGGTCGCCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10073#0      ------------------------------------------------AAGAGCAAGAAG 12
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      AAGAACAGAAGAGAGCAGAACAGAGCAAAGGGAATGGAATGGATCATTAAGAGAGAGATG 60
                                                                                   

consensus_10073#0      AGGAGAGGAGAGGAGTTGGAAGGTA--GAGAGAGACAAGCCATCATTAGCCACCAAATGC 70
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ATGATGAGTGAGCAGTGAGCAGCTGCCGACGGAAAGAAGCCATCATTAGGCACCAAATGC 120
                                                                                   

consensus_10073#0      AGGCATGCAT-CATATAGCTGACAGGACAAGAATCAGAGGAAGAAGAAGAGGAGGAGGAG 129
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      AG-CATGCACATGCTTAGCAGCATCAGCTGCTGCCGGCCAGGGGAGACAAGAAAACAGAG 179
                                                                                   

consensus_10073#0      GAGGAGGAGGAGACAGCTGCTGCCATGTCGTCGTATGACCAGATGCTCGCGCCGCTTCTT 189
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GAGAAGAAGAAGAAGA--AGAGGAAAGCCATCGTC-------ATCATCGTGTCGTGATTA 230
                                                                                   

consensus_10073#0      GGCGCCGGCCG-GTCGGCGTGGACGGCGCACGACGGCGGCGGCGGCGGCGGAGAAGCCGT 248
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GAATCCGGCCATGTCGACAGCAGAAGCAGCCGTGTGGAGGGGCCATGGCAGCAGCAACAT 290
                                                                                   

consensus_10073#0      GGTGAGGCAGATACTCAAGTGCACGAGGTGGCAGCTGGAGGAGACGACGGACTTCGTCAC 308
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      CACGCGGCAAATCCTCAAGTGCACGAGGTGGCAGCTGGAGGAGACCACGGACTTCATCAC 350
                                                                                   

consensus_10073#0      CTGCCCGTACCACTACTACTGCGACAGCTCGTACCCGGGCGACTACCACGCCGCCGTCGG 368
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ATGCCCCTACCACTACTACTGCGACAGGCC-TACCCCGGCGACTACTCCCCCGCCGTCGG 409
                                                                                   

consensus_10073#0      CGTGCTCGTCGCCGCCTTCGCCGCGTACTGCTTCCTCTCGACGCTCGCGTTCACGGTGCT 428
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      CGCGCTCGTCGCCGCCTTCGCCGCGTACTGCCTCGTTTCCGCCGCCGCATTCGCCGTACT 469
                                                                                   

consensus_10073#0      CGACCTGGCGAGGAGCGGCGGCGGCGGCGGCGGCGCGGGCGGGGTGAGGGGGATCAGGAG 488
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GGACATCGGCAGGGCCGGCGGCGGCGGCGG------------------GAGGAATAGGCG 511
                                                                                   

consensus_10073#0      GAAGTACCTGCTCCCGTCGGGGCCGTTCCTGCTGCCGCTGGTGCTGCTCGTGCTCGCCAA 548
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GAAGTACATGGTGCCGTCGGGCCCATTCTTGCTGCCGGTGGTGCTCCTGGCGCTCGCCAA 571
                                                                                   

consensus_10073#0      GGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCT 608
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GGGGCAGCGGATCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGAC 631
                                                                                   

consensus_10073#0      GCTGCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGT 668
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GCTGCAGGCGTCGGCGCTGGCTTTCCGGAACGAGGCCGACGGCGACCTCCGGTACGCGGT 691
                                                                                   

consensus_10073#0      GCTGGAGGCGTCCACCGTCTCCGGCGTGCTGCACGCCAGCCTGTACCTCGACGCCGTCGT 728
consensus_10073#2      ----------------------------------------------AGGAGAGGAGTTGG 14
consensus_10073#1      GCTGGAGGCGTCCACCGTGTCCGGGATCCTTCACGCCAGCCTCTACCTCGACGCCGTCGT 751
                                                                           *  ** * 

consensus_10073#0      GCTCCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGC 788
consensus_10073#2      GAGGTAGAGAGAGAAAATCCTGGAGGCGCTCCGGTGGTCGCAGTTTTCCGGCGAGTGCGC 74
consensus_10073#1      TCTGCCGTACTACACCGGCACCGACGCGCTCCGGTGGTCGCGGTTCTCCGGCGAGTGCGC 811
                                  * *        ** **************** *** **************

consensus_10073#0      GACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTGCGGTACCGCGG 848
consensus_10073#2      GACCTGCCTCTGCCGCATGGAGCCCCTCGTCGTCGGCGGCACGGCGGTNCGGTACCGCGG 134
consensus_10073#1      CACATGCCTCTGCCGGATGGACCCGCTCGTCGTCGGCGGCCGGACGGTGCTCTACCGGGG 871
                        ** *********** ***** ** ***************  * **** *  ***** **

consensus_10073#0      CCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGAT 908
consensus_10073#2      CCTCTCCAAGACGGCGCTGGCGATCATCTTCGCGCTGTGCTCGCGGATGGTGTGCCGGAT 194
consensus_10073#1      CCTGTCCAAGACGGCTCTCGCCATCATCTTCGCGCTCTGCTCCCGGATGGTGTGCCGGAT 931
                       *** *********** ** ** ************** ***** *****************

consensus_10073#0      TTACGGCGAGGAGCGGCTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGT 968
consensus_10073#2      TTACGGCGAGGAGCGGCTCANCGCGTGGACGCGGTCGGCGCTGGAGGCCGCCGGCTGGGT 254
consensus_10073#1      CTACGGCGAGGAGCGGGTCAGCGCGTGGACGCGGTCGGCGCTGGAGGCCGCGAGCTGGGT 991
                        *************** *** ******************************  *******

consensus_10073#0      GTTCGTGGCGGCCGACGCCGTCTACCTCGTCGGCTGGGTCGCCATCGAGGGCGGCGCCGT 1028
consensus_10073#2      GTTCGTGGCGGNCGACGNCGTCTACCTCGTCGGCTGGGTCGCCAT--------------- 299
consensus_10073#1      GTTCGTCGCCGGCGACGCCGTGTACCTCGCCGGGTGGGCGTTCGCGGAGGGCGCCGCGGC 1051
                       ****** ** * ***** *** ******* *** ****    *                 

consensus_10073#0      CGCCGTGCTGGCGTACAGCCTCGTCGCCGGCCTCGTCTTCCTCAGCGTCTTCGGCAAGGT 1088
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GAGCGTCGCGGCGTACGCTCTCGTGGCCGGCCTGGTGTTCCTGTGCATTTTTGGTAAGGT 1111
                                                                                   

consensus_10073#0      CTACAGATTCTTGGCATGGTTGGAGACGAGACAATCTCAATGGAAATCAAGCCTCTGCCA 1148
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GTACAAGTTCTTGGCTTGGATGGAGACGAGGCAGGTGCAGTGGAAACCAAGCGTCAGC-- 1169
                                                                                   

consensus_10073#0      TAGCGCTGTATGATACTACTACTCGTCAGAAAAAAAAAATCTGTAAAAAGAAAAAGGAAA 1208
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      TGCCACAGTAATGTGGT-TTGATCATTAATTTCTTTTCTTTTTTCGTTTTTTGGATCGAG 1228
                                                                                   

consensus_10073#0      CCATTTCTTAGCTCACCTTTTGTTCATTTGTACAATGATTCACACAATGAGAAAACCACA 1268
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      TTGTTTCTTTCTTTGATTCACAGGAAATTGTAAAG-------CATAAATGCATAATAACC 1281
                                                                                   

consensus_10073#0      GTTGTAATTTTTTTTTCATGCTTATATATAGGTTCTCTGAAACAAATTTGTTCAATTCTT 1328
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      CAT-TAATTCAGGTTTTGTGTGTATAACAAGGAAAAGAGATTTAACACTGCATATATGCT 1340
                                                                                   

consensus_10073#0      GGACAAGTTTTCTGAAGCCATTCTGAACTTTTTCTGATGAATCTTCAGAGTTTCTTTTCC 1388
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      GTGGAGATTTGC-------ATTTCTAACGTATTCCGCAAAACTCTGGAGATTTTTT---- 1389
                                                                                   

consensus_10073#0      ATTTTTCGATAGGGTGTTTGAGAGCAGCTTCCTGATTATAGCACACATTAGATATTCAGC 1448
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      TTCGAATTAGGCACGTGTACTACACTTTTGGGGTATAATTAGTTTGAACCTCCGATTTGG 1508
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      CATAAGCATGTCCGGGTTAGTACCCTTAGGTTAGGTCAGAGTGCCACCATTTTGGCAGAT 1568
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      GAGAATGGTGCCATGAGAAGTGAATGGGACAAACCGGCAATGATGCAGTGACAATGTGGT 1628
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      GGTTCAGGACATGTCAAGTTTGATCAAGCAAGGACATCACAACTGATGGCTTCTGCGAGC 1688
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      CAGTTCTTGGAGGCTTCCTCTCTGAGAATTGTTTCCTTATGCTCTTTCTCGTTGTCAGCT 1748
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      TGTCATCAATCAATCCTTCACCAGTTTGAGCCGAAGTGGTTGGAGCGTGGTTGGAGCTTT 1808
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      CACCTGATGTCTCACCTGGTTGCGATTTGAGCCAATGCAAGAACAGCACATAAGTACATA 1868
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      CTCACTGCAGTAAACTGATGCAAGGACTGCAGAGAATCTGATTCTGATGAAATGAAATTG 1928
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      AAGGGTGGCGACAATGAGTTTTAGAAGTGATAGTAAATGTACTTTTGTCGCATAGTATTT 1988
consensus_10073#2      ------------------------------------------------------------
consensus_10073#1      ------------------------------------------------------------
                                                                                   

consensus_10073#0      GGCCCTACAATTCGATCTGCAATGAACAAAGTGTT 2023
consensus_10073#2      -----------------------------------
consensus_10073#1      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)