These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10127#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4812 fasta sequence [AAACCCTAGCCCCGCGCCGCTCCATCTCCCACCGGCGCGCGCCGTCGCCGCCGCCGCCGCCTCCGCCTCCGCCTCGCGCCGTCGCCGCCACTTCCGCCTTCGCCTCCACCTCCGCCTCGTTTCCCCAACGCGCCACGGCAAAAGCGGGGGAACCCGCGCTGGAAAACTTGAAAAACCCCAACCTAACCCCCTCCCACCCCGCCATTCCTCACATTTGCACCCCCATCGCTGCGCTCTAGGTTTTTTTTTTTCCTCCGCGCCTTCTCCCCGCAAGAGGCGTATTGCTCCGGCGATGGCTTGGGCGGAGGACGAGGCGATTGGCCCCGACGTGGCCTCCGCGGGGCTCCACGTCTCGGAGCGGATCGGCCGCGACGCCGCCGCTCAGCCCGACCTGGAGGAGGCCCTCGAGGCCTCGCGCTACGCCTCCCATCCCTACTCCTCGCATCCCAAGGAGTGGCCTCCTTTGGTGGAAGTAGCAGAAACTAGGCAGTTACCTCCTATGCTGGTTGAAAGATATAATGCCGCTGCTGGTGAAGGAACAGCTCTTTGTGGAATATTTTCTGAAGTACACCGTGCCTGGGCAACTGTTGACAATTCATTTTTTATTTGGCGCTTTGATAAGTGGGATGGGCAATGTCAAGAGCATAACGCGGATGAACAAGTGATTTGTGCTGTTGGCCTTGCTAGAGCAAAGCCTGGTGTTTTTGTTGCAGCCATTCAGTACCTTTTAGTATTAGCAACTCCTGTTGAGCTGATACTTGTCGGAGTTTGCTGTTCAGCTAGTGGTGATGGAACTGATCCGTATGCGGAGCTCTCATTGCAACCTTTACCTGAGTACATTATTTCTACTGATGGTGTCACAATGACATGCATCACTTGTACAGATAAGGGTCAAATTTTCCTATCTGGGCGTGATGGCCATATATATGAGCTGCAATATACAACTGGTTCAGGTTGGCGAAAGCGCTGCCGTAAAGTTTGCCTTACTACTGGTTTAGGCAGCCTTCTTTCCAGGTGGGTTTTGCCAAATGCATTCAAGTTCTCGGCTGTTGATCCTATTGTTGATATGGTTATTGATGAGGAGAGAAATACAATTTATGCGCGCACAGAAGGCATGAAGATGCAGCTATTTGATTTAGGAGCTACTGGCGATGGTCCTCTGAGAAAGATCACTGAAGAAAAGAATCTTGTTGATCCACGAGATGCACCTTATGGCAGTCGGAGGCCTAATGCACAAAGAGCTGCACGATCCCCAAAACCATCAATTGTCTGCATTGCACCTTTGTCAGCTATGGAATCAAAATGGCTTCATGCTGTTGCTGTTTTATCAGATGGCAAGAGACTGTTCCTTTCTACATCAGGTGGGAGTAGTTCAGTTGGACTTAGCACTGGTTTGCAGAGGCCAAGCTGTCTAAAAATTGTTGCTACCAGGCCTTCCCCACCTCTAGGGGTTGGTGGTGGTCTCACATTTGGTGCTGTTTCAGCTGCTGGCAGAGCTCAACCTGAGGATCTTGCTTTAAAAGTGGAGTCAGCTTTCTATTCTGCCGGTGCTCTTATAATGTCAGATTCATCTGCTACAGCTATGTCCTCCCTTCTCGCTGTGCAGAAAGATTCAGCTGCCCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGAAACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCTTCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTTTGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCAGCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGTTTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCAGTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCTAGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGCTGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGCCTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGCACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTATCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTAGGTTCCAATGATCGTGGTGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATGAAGGTTCTTGAGAGTAAGATCCGTTCATTGGAAACATTTTTGAGGTCAAGAAGAAACAAAAGAAGAGGACTTTATGGTTATGTTGCTGGTCTAGGAGATTCTGGTTCCATACTGTACAAAGCAGGGCCTATCATTGGGTCTGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAACAGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGCGATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACTCTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAATGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGGTGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGGCAGGGGAACTGTTGATGAGATCAGCACTAAATTGGGAGAGGGTTGTCCTAGTTACTTCAATGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAACAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCCTGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGCAGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAATGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAAAATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGCAGACAAGTCATCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAGTGCGGAAGAAGCTCCAACTCTTGACCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGCAGATTCTTCGAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGCAGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGAAAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGTGATAACATTCTAGCTGATGCGGATACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATC-TAAAGAGTATTACTCAACTTTACAACGATTATGCTGTTCCATTTAATCTTTGGGAGGTTTGCCTGGAAATGCTCAACTTTGCAAATTATTCTGGAGATGCTGACAGTAAAATTGTTCGAGAAATTTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGTGGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGTTGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGTGCTTGCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGGCTTCTGAGATCAGTTCTTGCAATCCTTCGTGAATGGGGCATGACTGTCATTGCACATAAACTAGGCACCACAACTGCTGGGGCTTCATTCTTTCTTGATGGAACATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTTTGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGAATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAATTTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGATAAAGCTAAGCCATCCTGGTTCA] [+] EMBL AK120378 [AAACCCTAGCCCCGCGCCGCTCCATCTCCCACCGGCGCGCGCCGTCGCCGCCGCCGCCGCCTCCGCCTCCGCCTCGCGCCGTCGCCGCCACTTCCGCCTTCGCCTCCACCTCCGCCTCGTTTCCCCAACGCGCCACGGCAAAAGCGGGGGAACCCGCGCTGGAAAACTTGAAAAACCCCAACCTAACCCCCTCCCACCCCGCCATTCCTCACATTTGCACCCCCATCGCTGCGCTCTAGGTTTTTTTTTTTCCTCCGCGCCTTCTCCCCGCAAGAGGCGTATTGCTCCGGCGATGGCTTGGGCGGAGGACGAGGCGATTGGCCCCGACGTGGCCTCCGCGGGGCTCCACGTCTCGGAGCGGATCGGCCGCGACGCCGCCGCTCAGCCCGACCTGGAGGAGGCCCTCGAGGCCTCGCGCTACGCCTCCCATCCCTACTCCTCGCATCCCAAGGAGTGGCCTCCTTTGGTGGAAGTAGCAGAAACTAGGCAGTTACCTCCTATGCTGGTTGAAAGATATAATGCCGCTGCTGGTGAAGGAACAGCTCTTTGTGGAATATTTTCTGAAGTACACCGTGCCTGGGCAACTGTTGACAATTCATTTTTTATTTGGCGCTTTGATAAGTGGGATGGGCAATGTCAAGAGCATAACGCGGATGAACAAGTGATTTGTGCTGTTGGCCTTGCTAGAGCAAAGCCTGGTGTTTTTGTTGCAGCCATTCAGTACCTTTTAGTATTAGCAACTCCTGTTGAGCTGATACTTGTCGGAGTTTGCTGTTCAGCTAGTGGTGATGGAACTGATCCGTATGCGGAGCTCTCATTGCAACCTTTACCTGAGTACATTATTTCTACTGATGGTGTCACAATGACATGCATCACTTGTACAGATAAGGGTCAAATTTTCCTATCTGGGCGTGATGGCCATATATATGAGCTGCAATATACAACTGGTTCAGGTTGGCGAAAGCGCTGCCGTAAAGTTTGCCTTACTACTGGTTTAGGCAGCCTTCTTTCCAGGTGGGTTTTGCCAAATGCATTCAAGTTCTCGGCTGTTGATCCTATTGTTGATATGGTTATTGATGAGGAGAGAAATACAATTTATGCGCGCACAGAAGGCATGAAGATGCAGCTATTTGATTTAGGAGCTACTGGCGATGGTCCTCTGAGAAAGATCACTGAAGAAAAGAATCTTGTTGATCCACGAGATGCACCTTATGGCAGTCGGAGGCCTAATGCACAAAGAGCTGCACGATCCCCAAAACCATCAATTGTCTGCATTGCACCTTTGTCAGCTATGGAATCAAAATGGCTTCATGCTGTTGCTGTTTTATCAGATGGCAAGAGACTGTTCCTTTCTACATCAGGTGGGAGTAGTTCAGTTGGACTTAGCACTGGTTTGCAGAGGCCAAGCTGTCTAAAAATTGTTGCTACCAGGCCTTCCCCACCTCTAGGGGTTGGTGGTGGTCTCACATTTGGTGCTGTTTCAGCTGCTGGCAGAGCTCAACCTGAGGATCTTGCTTTAAAAGTGGAGTCAGCTTTCTATTCTGCCGGTGCTCTTATAATGTCAGATTCATCTGCTACAGCTATGTCCTCCCTTCTCGCTGTGCAGAAAGATTCAGCTGCCCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGAAACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCTTCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTTTGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCAGCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGTTTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCAGTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCTAGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGCTGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGCCTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGCACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTATCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTAGGTTCCAATGATCGTGGTGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATGAAGGTTCTTGAGAGTAAGATCCGTTCATTGGAAACATTTTTGAGGTCAAGAAGAAACAAAAGAAGAGGACTTTATGGTTATGTTGCTGGTCTAGGAGATTCTGGTTCCATACTGTACAAAGCAGGGCCTATCATTGGGTCTGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAACAGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGCGATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACTCTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAATGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGGTGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGGCAGGGGAACTGTTGATGAGATCAGCACTAAATTGGGAGAGGGTTGTCCTAGTTACTTCAATGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAACAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCCTGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGCAGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAATGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAAAATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGCAGACAAGTCATCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAGTGCGGAAGAAGCTCCAACTCTTGACCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGCAGATTCTTCGAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGCAGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGAAAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGTGATAACATTCTAGCTGATGCGGATACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATC TAAAGAGTATTACTCAACTTTACAACGATTATGCTGTTCCATTTAATCTTTGGGAGGTTTGCCTGGAAATGCTCAACTTTGCAAATTATTCTGGAGATGCTGACAGTAAAATTGTTCGAGAAATTTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGTGGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGTTGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGTGCTTGCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGGCTTCTGAGATCAGTTCTTGCAATCCTTCGTGAATGGGGCATGACTGTCATTGCACATAAACTAGGCACCACAACTGCTGGGGCTTCATTCTTTCTTGATGGAACATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTTTGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGAATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAATTTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGATAAAGCTAAGCCATCCTGGTTCA] [+] EMBL CB668198 [ GCTGCCCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGAAACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCTTCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTTTGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCAGCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGTTTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCAGTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCTAGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGCTGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGCCTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGCACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTATCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTANGTTCCAATGATCGTGGTGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATG ] [-] EMBL CB668199 [ AAGCAGGGCGTATCATTGGGTCTGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAACAGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGCGATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACTCTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAATGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGGTGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGGCAGGGGAACTGTTGATGAGATCAGCACTAAATTGAGAGAGGGTTGTCCTAGTTACTTCAATGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAACAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCCTGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGCAGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAATGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAAAATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGCAGACAAGTCATCTGCTTCAGTTACTGCACTGGA ] [+] EMBL CA765150 [ TGGACAGAGTGGCACACAAGGTGCAGACAAGTCNTCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGNAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAATGCGGAAGAAGCTCCAACTCTTGACCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGCAGATTCTTCAAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGCAGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGAAAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGNGATAACATTCTAGCTGATGCGGAGACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATCTTAAAGAGTATTACTCAACTTTACAACGATTATGCTG ] [+] EMBL CB629012 [ TTAAACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAGGACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGTTGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGTTGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAAGTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAGAATGTTGTTG ] [+] EMBL AK062221 [ GACAGTAAAATTGTTCGAGAAGTTTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGTGGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGTTGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGTGCTTGCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGGCTTCTGAGATCAGTTCTTGCAATCCTTCGTGAATGGGGCATGACTGTCATTGCACATAAACTAGGCACCACAACTGCTGGGGCTTCATTCTTTCTTGATGGAACATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTTTGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGAATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAATTTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGATAAAGCTAAGCCATCCTG ] consensusID : consensus_10127#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence [TTTGGGCCAGGCTTCTTGACCAGGCACTTACAACACGTGGTGTTGCACAACCATGTTCTGTGGTGACAACACTACGTTCAAAACTTGATCCTGCACATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCCACAAGCTGCATTGGATACATTAACCTCACGACAACAATTACTTGGTCACCACGATGTTGCAACAGCCCTTCTCGAGCCTGTAAACGTCTACCTGAACCTGTGCTTGCCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGCTTCTGAGATCAGTTCTTTGCAATCCTTCCTTGAATTGGGGCATTACTGTCATTTGCCCATAAACTAGGCCCCACAAACTTGCTTGGGGGCTTCCATTCCTTTC] [+] EMBL AA754096 [TTTGGGCCAGGCTTCTTGACCAGGCACTTACAACACGTGGTGTTGCACAACCATGTTCTGTGGTGACAACACTACGTTCAAAACTTGATCCTGCACATGGCGCTTGTTTACCATTGGATATAATATGCCTTCATCTCCACAAGCTGCATTGGATACATTAACCTCACGACAACAATTACTTGGTCACCACGATGTTGCAACAGCCCTTCTCGAGCCTGTAAACGTCTACCTGAACCTGTGCTTGCCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGAAGCTGCGCTTCTGAGATCAGTTCTTTGCAATCCTTCCTTGAATTGGGGCATTACTGTCATTTGCCCATAAACTAGGCCCCACAAACTTGCTTGGGGGCTTCCATTCCTTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10127#0 AAACCCTAGCCCCGCGCCGCTCCATCTCCCACCGGCGCGCGCCGTCGCCGCCGCCGCCGC 60 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CTCCGCCTCCGCCTCGCGCCGTCGCCGCCACTTCCGCCTTCGCCTCCACCTCCGCCTCGT 120 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TTCCCCAACGCGCCACGGCAAAAGCGGGGGAACCCGCGCTGGAAAACTTGAAAAACCCCA 180 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ACCTAACCCCCTCCCACCCCGCCATTCCTCACATTTGCACCCCCATCGCTGCGCTCTAGG 240 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TTTTTTTTTTTCCTCCGCGCCTTCTCCCCGCAAGAGGCGTATTGCTCCGGCGATGGCTTG 300 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GGCGGAGGACGAGGCGATTGGCCCCGACGTGGCCTCCGCGGGGCTCCACGTCTCGGAGCG 360 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GATCGGCCGCGACGCCGCCGCTCAGCCCGACCTGGAGGAGGCCCTCGAGGCCTCGCGCTA 420 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CGCCTCCCATCCCTACTCCTCGCATCCCAAGGAGTGGCCTCCTTTGGTGGAAGTAGCAGA 480 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AACTAGGCAGTTACCTCCTATGCTGGTTGAAAGATATAATGCCGCTGCTGGTGAAGGAAC 540 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGCTCTTTGTGGAATATTTTCTGAAGTACACCGTGCCTGGGCAACTGTTGACAATTCATT 600 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TTTTATTTGGCGCTTTGATAAGTGGGATGGGCAATGTCAAGAGCATAACGCGGATGAACA 660 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGTGATTTGTGCTGTTGGCCTTGCTAGAGCAAAGCCTGGTGTTTTTGTTGCAGCCATTCA 720 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GTACCTTTTAGTATTAGCAACTCCTGTTGAGCTGATACTTGTCGGAGTTTGCTGTTCAGC 780 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TAGTGGTGATGGAACTGATCCGTATGCGGAGCTCTCATTGCAACCTTTACCTGAGTACAT 840 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TATTTCTACTGATGGTGTCACAATGACATGCATCACTTGTACAGATAAGGGTCAAATTTT 900 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CCTATCTGGGCGTGATGGCCATATATATGAGCTGCAATATACAACTGGTTCAGGTTGGCG 960 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AAAGCGCTGCCGTAAAGTTTGCCTTACTACTGGTTTAGGCAGCCTTCTTTCCAGGTGGGT 1020 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TTTGCCAAATGCATTCAAGTTCTCGGCTGTTGATCCTATTGTTGATATGGTTATTGATGA 1080 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GGAGAGAAATACAATTTATGCGCGCACAGAAGGCATGAAGATGCAGCTATTTGATTTAGG 1140 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGCTACTGGCGATGGTCCTCTGAGAAAGATCACTGAAGAAAAGAATCTTGTTGATCCACG 1200 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGATGCACCTTATGGCAGTCGGAGGCCTAATGCACAAAGAGCTGCACGATCCCCAAAACC 1260 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ATCAATTGTCTGCATTGCACCTTTGTCAGCTATGGAATCAAAATGGCTTCATGCTGTTGC 1320 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGTTTTATCAGATGGCAAGAGACTGTTCCTTTCTACATCAGGTGGGAGTAGTTCAGTTGG 1380 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ACTTAGCACTGGTTTGCAGAGGCCAAGCTGTCTAAAAATTGTTGCTACCAGGCCTTCCCC 1440 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ACCTCTAGGGGTTGGTGGTGGTCTCACATTTGGTGCTGTTTCAGCTGCTGGCAGAGCTCA 1500 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ACCTGAGGATCTTGCTTTAAAAGTGGAGTCAGCTTTCTATTCTGCCGGTGCTCTTATAAT 1560 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GTCAGATTCATCTGCTACAGCTATGTCCTCCCTTCTCGCTGTGCAGAAAGATTCAGCTGC 1620 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CCAATTATCCCTTCCCAGTACTTTTGGGACAGCATCTAGAAGCTCGAGGGCTCTGCGAGA 1680 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AACAGTCTCTGCTTTGCCTGTTGAAGGTCGGATGCTTTGTGCCTCTGATGTCTTCCCGCT 1740 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TCCAGATGCTGCTTTCATCATGCAGTCATTATATGCAGACGTGGAATGCTTTGCATCTTT 1800 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGGAAAACCTTCTGAGAAGTCATCCATTAAACTGTGGGCTAAAGGAGATCTTCCTACCCA 1860 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GCATATCTTACCTCGGAGGAGGATTGTTATATTCAATACTATGGGTTTGATGGAGGTAGT 1920 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TTTTAACAGACCTGTTGATATCCTAAGAAAATTGTTTGATGGGAACACTTTGAGATCTCA 1980 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GTTAGAAGAATTCTTTAGCCGCTTTGGTGCTGGAGAGGCTGCAGCAATGTGCTTAATGCT 2040 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGCTGCTAAGCTGCTTTATGCTGAAGATAGCCTGATAAGCAATGCAGTTTCTGAGAAAGC 2100 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGCTGAAGCATTTGAGGACCCTGGACTTGTCGGAATGCCTCAAATTGATGGCAGTACTGC 2160 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CTTGTCTAACACTCGAACTCAGGCTGGAGGCTTTAGTATGGGACAAGTTGTTCAAGAAGC 2220 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ACAACCTATATTTTCTGGTGCATATGAAGGGCTTTGCTTGTGCTCTTCTAGACTACTGTA 2280 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TCCTATCTGGGAACTTCCAATTATGGTGGTTCGAGGACTGGTAGGTTCCAATGATCGTGG 2340 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGATGGTGTGGTTGTTTGCAGGCTTTCTACTGGGGCCATGAAGGTTCTTGAGAGTAAGAT 2400 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CCGTTCATTGGAAACATTTTTGAGGTCAAGAAGAAACAAAAGAAGAGGACTTTATGGTTA 2460 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGTTGCTGGTCTAGGAGATTCTGGTTCCATACTGTACAAAGCAGGGCCTATCATTGGGTC 2520 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGGTGGTCATAGCAGTGGGAAGAGTCCATACAGCTCTCGCATTAGAGACGCTGATCCAAC 2580 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGATCAGTCTGCATCAAATAAAAAGCAAAGGCTGCCTTACACATCAGCCGAACTAGCTGC 2640 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GATGGAGGTGAGGGCAATTGAGTGCCTTAGGCGGTTGCTTCGAAGATCTGGTGAAGCACT 2700 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CTTTCTGCTTCAACTTATTTGCCAGCATAATGTTGCTCGCTTGGTTCAGACACTAGGTAA 2760 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGATTTGCGCAAGAAACTAGTTCAGTTAACATTTCATCAGTTGGTATGTTCTGAGGATGG 2820 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGACCAGCTTGCCATGCGCCTTATTTCTGCACTCATGGAGTACTATATCGGTCCAGAGGG 2880 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CAGGGGAACTGTTGATGAGATCAGCACTAAATTGGGAGAGGGTTGTCCTAGTTACTTCAA 2940 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGAGTCAGATTATAAATATTACTTAGCAGTGGAATGCCTTGAGAGAGCATCTATGACAAA 3000 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CAATCATGACGAGAAAGACATCCTTGCTAGAGATGCCTTCAATCTTTTAACTAAAATTCC 3060 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGACTCTGCTGACTTGAGTGCTATATGCAAGAGATTTGAGAACCTAAGGTTCTACGAGGC 3120 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGTAGTCCGTTTGCCTTTACAGAAAGCTCAAGCACTTGATTCCAATGCTGATGTTATTAA 3180 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGGGCAAATCGACGCAAGGCATCATGATACTATAACTGCACAGCGTGAACAGTGCTATAA 3240 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AATAGTTATGAATGCTTTACGTACCCTCAAGGGTGTTGGACAGAGTGGCACACAAGGTGC 3300 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGACAAGTCATCTGCTTCAGTTACTGCACTTGATCCAGCTTCTCGAGGGAAGTATATTAA 3360 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ACAGATTATTCAATTAAGTGTCCAGTGGCCAGACACAGTGTTTCATGAGCATCTGTATAG 3420 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GACTCTTATTGAGCTTGGTTTGGAAAATGAACTTTTGGAATATGGAGGTTCTGATCTGGT 3480 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGCTTTTCTCCAGAGCGCTGGTCGTAAGCATCATGAAGAGGTTCAAGGACTTTCTGTGGT 3540 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGCATCAAAAGCCTCTAAACTGACTGATTTGGATGCACCTATTTCAACTAGTCAAACCAA 3600 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GTATCTTGAGCTGCTAGCCAGGTATTATGTTCTCAAGGGGGAGCATATTGCTGCTGCTAG 3660 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AATGTTGTTGATATTGGCAGAAAGACAGTGCTCCAGTGCGGAAGAAGCTCCAACTCTTGA 3720 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 CCAGAGGTATCAATATCTGAGCAGTGCAGCGATTCAGGCCAAAAGTGCAGGCATTACTGC 3780 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGATTCTTCGAGGAATCCTATTGATAGCAGCACGATAGATCTACTTGAAGGCAAACTTGC 3840 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AGTTCTTCGGTTCCAAATGCAAATCAAGCAAGAACTAGAGTTCATGGCTTCACAGCTTGA 3900 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AAATCTGTCAGGCAGTTCTGAATCACCAAATGATCCCTTTCCTCGTGATAACATTCTAGC 3960 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGATGCGGATACTGCTAGATTTGCCATGGACAAGGCTAAAGAGCTTTCACTGAATCTAAA 4020 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GAGTATTACTCAACTTTACAACGATTATGCTGTTCCATTTAATCTTTGGGAGGTTTGCCT 4080 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 GGAAATGCTCAACTTTGCAAATTATTCTGGAGATGCTGACAGTAAAATTGTTCGAGAAAT 4140 consensus_10127#1 -----------------------------------------------------------T 1 * consensus_10127#0 TTGGGCCAGGCTTCTTGACCAGGCACTTACAAGAGGTGGTGTTGCAGAAGCATGTTCTGT 4200 consensus_10127#1 TTGGGCCAGGCTTCTTGACCAGGCACTTACAACACGTGGTGTTGCACAACCATGTTCTGT 61 ******************************** * *********** ** ********** consensus_10127#0 GGTGAGAAGAGTAGGTTCAAAACTTGATCCTGCAGATGGCGCTTGTTTACCATTGGATAT 4260 consensus_10127#1 GGTGACAACACTACGTTCAAAACTTGATCCTGCACATGGCGCTTGTTTACCATTGGATAT 121 ***** ** * ** ******************** ************************* consensus_10127#0 AATATGCCTTCATCTCGAGAAGGCTGCATTGGATAGATTAAGCTCAGGAGAAGAATTAGT 4320 consensus_10127#1 AATATGCCTTCATCTCCACAAG-CTGCATTGGATACATTAACCTCACGACAACAATTACT 180 **************** * *** ************ ***** **** ** ** ***** * consensus_10127#0 TGGTGACGAGGATGTTGCAAGAGCCCTTCTCGGAGCCTGTAAAGGTCTACCTGAACCTGT 4380 consensus_10127#1 TGGTCACCACGATGTTGCAACAGCCCTTCTCG-AGCCTGTAAACGTCTACCTGAACCTGT 239 **** ** * ********** *********** ********** **************** consensus_10127#0 GCTTGCC-GTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGA 4439 consensus_10127#1 GCTTGCCCGTGTATGATCAACTGTTATCAAATGGCGCTATTGTTCCCTCCCTAAACCTGA 299 ******* **************************************************** consensus_10127#0 AGCTGCGGCTTCTGAGATCAGTTCTT-GCAATCCTTCGTGAA--TGGGGCATGACTGTCA 4496 consensus_10127#1 AGCTGCG-CTTCTGAGATCAGTTCTTTGCAATCCTTCCTTGAATTGGGGCATTACTGTCA 358 ******* ****************** ********** * * ******** ******* consensus_10127#0 TT-GCACATAAACTAGGCACCACAA--CTGCT--GGGGCTTC-ATTCTTTCTTGATGGAA 4550 consensus_10127#1 TTTGCCCATAAACTAGGCCCCACAAACTTGCTTGGGGGCTTCCATTCCTTTC-------- 410 ** ** ************ ****** **** ******** **** ** consensus_10127#0 CATTTTCGCTGAATCAAACATGGTCTTTAAATCAAGGCGTTCGAGATAAAATAAGTAGTT 4610 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TGGCAAACCGGTATATGGCTGAGGTGAGGCGGTTAAGCCTTCCAAAGAACCAAACAGAGA 4670 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 ATGTCTATCGAGGTTTCCAAGAGCTAGAGGAGAAATTATTAACTAATTAGACATTTCAAT 4730 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 TTGTATTCTCGGCACTGTAAAACATGGGTTCGTGCATTTGTTGTACCCAAGTAGAGAGAT 4790 consensus_10127#1 ------------------------------------------------------------ consensus_10127#0 AAAGCTAAGCCATCCTGGTTCA 4812 consensus_10127#1 ---------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||