These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1726 fasta sequence [CCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTCCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGCTGGGATTCCATTTGTTTAACAGCAATGTGGTTATAGCACATATTTTCATTTTTTTACACACAGCAAAATAGCATGCACAAAGAGATATTGGCCTGATTTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAGGGTAAACCTATAAAAAATCATTGTGCTACTTGTCCGATTGCACATGTTCTATTTGTGCATGCATAGGAATAATTAGTTACTGCTTTGGTGTACATAAGATTGTTTTTTTTGCTACCTGCTTCAGTGTTCCTAATTGGCTTCATGGCGATACAAATGAGAAGAATGAAGTGTTGATTCAAGCTAGAAGATAATTTACTATTTCATAGATAATCTTGATGTTTAGTACAGAAGGCACACAATTCAACTTGATCGCAACCGCTTGCTGTAGTATGATGCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGT-TCATGGTCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCCATGGCTTTGCATATGCTTTTGTAACATTTATGG---GATGAGGGCCTTCATTTGAGTGAATACACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAATGAGGCCATATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGT-AATAATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGGGAGTAAACTACCGCAAGTCTTCCAAGTTCTTCTATCTGAAGAAAAGAACACATTTATCCGCGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATGTCATGTGTGCATCCTTGCTGTTTATCCAGTGATTGGTCATAATGCATATGTTGACTTTAAAAAAAAAAAAAA] [+] EMBL AK103770 [CCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTCCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGCTGGGATTCCATTTGTTTAACAGCAATGTGGTTATAGCACATATTTTCATTTTTTTACACACAGCAAAATAGCATGCACAAAGAGATATTGGCCTGATTTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAGGGTAAACCTATAAAAAATCATTGTGCTACTTGTCCGATTGCACATGTTCTATTTGTGCATGCATAGGAATAATTAGTTACTGCTTTGGTGTACATAAGATTGTTTTTTTTGCTACCTGCTTCAGTGTTCCTAATTGGCTTCATGGCGATACAAATGAGAAGAATGAAGTGTTGATTCAAGCTAGAAGATAATTTACTATTTCATAGATAATCTTGATGTTTAGTACAGAAGGCACACAATTCAACTTGATCGCAACCGCTTGCTGTAGTATGATGCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGT TCATGGTCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCCATGGCTTTGCATATGCTTTTGTAACATTTATGG GATGAGGGCCTTCATTTGAGTGAATACACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAATGAGGCCATATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGT AATAATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGGGAGTAAACTACCGCAAGTCTTCCAAGTTCTTCTATCTGAAGAAAAGAACACATTTATCCGCGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATG ] [-] EMBL CF312328 [ GCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGTNTCATGGTCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCCATGGCTTTGCATATGCTTTTGTAGCATTTATGGGATGATGAGGGCCTTCATTTGAGTGAATACACATAAATTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAATGAGGCCGTATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGTGAATAATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGGGAGTAAACTACCGCAAGTCTTCCAAGTTTTTCTATTTGAAGAAAAGAACACATTTATCCGCGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATGTCATGTGTGCATCCTTGCTGTTTATCCAGTGATTGGTCATAATGCATATGTTGACTTTAAAAAAAAAAAAAA] consensusID : consensus_10147#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1203 fasta sequence [CGCCGTCCTCCGTGACAACCAGACCCTCATCCTCGTCGTAGAAACCGGAAGCAGCAAGACCACTTAGGTATTGAATGTGCACCTTTGCCTGTACATCTCCACGTTGAACTGTAAATGTATTTTAGGTTAGTCGTTATTGGAACCTTCGCGAAGACGGTGAATCCTGGTCCGGTGTCTGGTTTGCCCCGGATTCGGGAGGAGTTTCCGTCGAGGTCGAGGGATTTCTGGGGCACAACCAATATCTCCCGTCTCCAAGGAGCTCAACACCCACGCGCAAGAAGCATCAATGACCAGCTCTGGACCTTGATGATTGCACTAGGCTTCAATGCAGTAGTGAGCGTGAGGGTGTCAAACGAGATCAGGTACTAATATGGTCCTTCACATGTTATTGATTCATGGAGAGCTTTCAAGTGAGTCTGTAAGGTGCGCAGGATAGATGTTGGTCCGGGATATCAATGTTCCTCTTCCATTGCTACAGGATCCATGGCTTTGCAGATGCTTTTGTAGCATTTGTGGGATGATGAAGGCCTTCATTTGTACAAATTCACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACACTACTGTTATGTGCAAATGAGGCCATATGAACAGTTCATAACCATGAGCCTTCAATTCATAATAACCAGCAAGGTAATAATTAAATTTGCTCTAACATTTCTGCATTTTCTTTCAGTAACCGATGTTTATCAATGATACTCCCTTCCTGTGACTCTTAGCAATTAGCATGTTACCAACAGGAAGTGTGGCTTTCCTATCTTTTACGCAGGTTGCACTGTTGCACTAAACCATAGGACTGCATTTCTGTTCTCATCTGTTTGTGTTGTTTGTTCATCTCTCTTGAAAAGAGGTCACAAATTTATAATAATGCAGATCTAATCAACAAGGGAGTAAACTACCATGAGTCTTCCAAGTTCTCTCTGAAGAAAATAACACATTTATCTGCAGTAACACCGTTTGTATTTTGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATATATAAATTACTAATTTTTAAAAAGGATGAATGGCATGTGTGCATCCCCGCTGTTTATCCATTGAACGGTCATAATACATAGTTGACTTTATGTAAAGATACTTAACATTGTTATTGGCTCATCATTTAGATTCCTGCAATCTTAATAGTTCCCTTT] [+] EMBL AK067929 [CGCCGTCCTCCGTGACAACCAGACCCTCATCCTCGTCGTAGAAACCGGAAGCAGCAAGACCACTTAGGTATTGAATGTGCACCTTTGCCTGTACATCTCCACGTTGAACTGTAAATGTATTTTAGGTTAGTCGTTATTGGAACCTTCGCGAAGACGGTGAATCCTGGTCCGGTGTCTGGTTTGCCCCGGATTCGGGAGGAGTTTCCGTCGAGGTCGAGGGATTTCTGGGGCACAACCAATATCTCCCGTCTCCAAGGAGCTCAACACCCACGCGCAAGAAGCATCAATGACCAGCTCTGGACCTTGATGATTGCACTAGGCTTCAATGCAGTAGTGAGCGTGAGGGTGTCAAACGAGATCAGGTACTAATATGGTCCTTCACATGTTATTGATTCATGGAGAGCTTTCAAGTGAGTCTGTAAGGTGCGCAGGATAGATGTTGGTCCGGGATATCAATGTTCCTCTTCCATTGCTACAGGATCCATGGCTTTGCAGATGCTTTTGTAGCATTTGTGGGATGATGAAGGCCTTCATTTGTACAAATTCACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACACTACTGTTATGTGCAAATGAGGCCATATGAACAGTTCATAACCATGAGCCTTCAATTCATAATAACCAGCAAGGTAATAATTAAATTTGCTCTAACATTTCTGCATTTTCTTTCAGTAACCGATGTTTATCAATGATACTCCCTTCCTGTGACTCTTAGCAATTAGCATGTTACCAACAGGAAGTGTGGCTTTCCTATCTTTTACGCAGGTTGCACTGTTGCACTAAACCATAGGACTGCATTTCTGTTCTCATCTGTTTGTGTTGTTTGTTCATCTCTCTTGAAAAGAGGTCACAAATTTATAATAATGCAGATCTAATCAACAAGGGAGTAAACTACCATGAGTCTTCCAAGTTCTCTCTGAAGAAAATAACACATTTATCTGCAGTAACACCGTTTGTATTTTGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATATATAAATTACTAATTTTTAAAAAGGATGAATGGCATGTGTGCATCCCCGCTGTTTATCCATTGAACGGTCATAATACATAGTTGACTTTATGTAAAGATACTTAACATTGTTATTGGCTCATCATTTAGATTCCTGCAATCTTAATAGTTCCCTTT] consensusID : consensus_10147#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 793 fasta sequence [CTCTGACATATTCTCTCCCCATTCCCCATTTCCGCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATTCTCGCTGCAGCGGAGCAAGCAGCGAGCGCTACAGCCACCATGTTGACAAGCCAGCCAGCCAGCGTTGTCGCCTTCTCACCTTACTTGCCGTCGACCCTGTGCCACTTCGTCATCGTCGAGCCAGCGGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCTCCCTGTGGAGCCGACCGCCACCGTTGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAACCATCTCGTCCACGGCCATCTCCTCGCTTCTTGTGGCTGCTGCTTGTCGGCTTCTCCACACTTCTCCAATTGTAGGTATTTTACTGCTCAGATTAGCTTTGCTTTGGTCTCTATACAGGTATGATTCCTACTAATTTCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAGTGCAAACAACAGTCAGGTTTTCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATCTTGCTGGGATTCCATTTGTTTAGCAGCCATATGTGGTTATAGCACATATTTTCATTTTTTTTTACACACAGCAGAATAGCATGTACAAAGAGATATTGGCCTGATTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAAGGTAAACCTA] [+] EMBL CB678523 [CTCTGACATATTCTCTCCCCATTCCCCATTTCCGCACCCATGCTACTCCCAAATCCCCAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATTCTCGCTGCAGCGGAGCAAGCAGCGAGCGCTACAGCCACCATGTTGACAAGCCAGCCAGCCAGCGTTGTCGCCTTCTCACCTTACTTGCCGTCGACCCTGTGCCACTTCGTCATCGTCGAGCCAGCGGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCTCCCTGTGGAGCCGACCGCCACCGTTGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAACCATCTCGTCCACGGCCATCTCCTCGCTTCTTGTGGCTGCTGCTTGTCGGCTTCTCCACACTTCTCCAATTGTAGGTATTTTACTGCTCAGATTAGCTTTGCTTTGGTCTCTATACAGGTATGATTCCTACTAATTTCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAGTGCAAACAACAGTCAGGTTTTCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATCTTGCTGGGATTCCATTTGTTTAGCAGCCATATGTGGTTATAGCACATATTTTCATTTTTTTTTACACACAGCAGAATAGCATGTACAAAGAGATATTGGCCTGATTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGTTAGTGCAGGATGCCACAAAACAATGCACCATGAAAGGTAAACCTA] consensusID : consensus_10147#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence [CATGACTGAAGGAGTAGAAAAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGGGCCAACATCCGCCGTCGTCTTCTCGTGGAGTCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGC] [+] EMBL CF312327 [CATGACTGAAGGAGTAGAAAAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGGGCCAACATCCGCCGTCGTCTTCTCGTGGAGTCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGATGCATGATAGTTTTATATATATTGC] consensusID : consensus_10147#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence [AACTGACTGGACTGAAGGAGTAGAAAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGA] [+] EMBL CF316088 [AACTGACTGGACTGAAGGAGTAGAAAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGCCGCCGACCGGCGCCGCCGTCTTCTCGCGGAGCAAGCAGCGAGCACTACAGCCTCCATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCGTGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTGCGCCACCCCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTGGAGCCAATGGTCAGCACTGCCACCAAACATCTCGTCCATGGCCATCTCCTCGCTTCCTGTGACTGCTGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCACTCTGTATGCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTCTTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTATGATTCCTACTAATCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCCTAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGTTTCAGGGA] consensusID : consensus_10147#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence [TAGGTTCCATAGCTTTGCATATGCTTTTGTAGCATTTATGGGATGATGGGGGCCTTCCTTTGAGTGAATCCACATAAGTGGATGGCATTTCTTCATTTTGCATAGTACAAACTATGCAGTTAGGTGCAAATGAGCCCATATGACCAATTCATCGCCATGGGGCTTCAATTCATAATATCCATCAAGGTAATAACTAAATTTGTTCTATCATTTATGCATTTTGTTTCAGTACCCAATGTTTATCAGCAAGGGAGTAAATTCCCGCGAAGTGGTTGCCAACGTTATTTTCTCCGAAGAAAAGAACACATTTATCCTCGGTAGCACCATTTGTAATTAGGAGCCCAAATTATATTCAAATTATTTTAGCAATGGTTTAATTTCTTTGGGATAGCTTAGTTATTAATTTGGAAAAAGGATGAATGTCATGGGGGTATCCTCGCGGTTTATCCAGGGATTGGTCA] [-] EMBL CB678524 [TAGGTTCCATAGCTTTGCATATGCTTTTGTAGCATTTATGGGATGATGGGGGCCTTCCTTTGAGTGAATCCACATAAGTGGATGGCATTTCTTCATTTTGCATAGTACAAACTATGCAGTTAGGTGCAAATGAGCCCATATGACCAATTCATCGCCATGGGGCTTCAATTCATAATATCCATCAAGGTAATAACTAAATTTGTTCTATCATTTATGCATTTTGTTTCAGTACCCAATGTTTATCAGCAAGGGAGTAAATTCCCGCGAAGTGGTTGCCAACGTTATTTTCTCCGAAGAAAAGAACACATTTATCCTCGGTAGCACCATTTGTAATTAGGAGCCCAAATTATATTCAAATTATTTTAGCAATGGTTTAATTTCTTTGGGATAGCTTAGTTATTAATTTGGAAAAAGGATGAATGTCATGGGGGTATCCTCGCGGTTTATCCAGGGATTGGTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ------------------------------------------------------------ consensus_10147#1 CGCCGTCCTCCGTGACAACCAGACCCTCATCCTCGTCGTAGAAACCGGAAGCAGCAAGAC 60 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ------------------------------------------------------------ consensus_10147#1 CACTTAGGTATTGAATGTGCACCTTTGCCTGTACATCTCCACGTTGAACTGTAAATGTAT 120 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ------------------------------------------------------------ consensus_10147#1 TTTAGGTTAGTCGTTATTGGAACCTTCGCGAAGACGGTGAATCCTGGTCCGGTGTCTGGT 180 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ------------------------------------------------------------ consensus_10147#1 TTGCCCCGGATTCGGGAGGAGTTTCCGTCGAGGTCGAGGGATTTCTGGGGCACAACCAAT 240 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ------------------------------------------------------------ consensus_10147#1 ATCTCCCGTCTCCAAGGAGCTCAACACCCACGCGCAAGAAGCATCAATGACCAGCTCTGG 300 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ------------------------------------------------------------ consensus_10147#1 ACCTTGATGATTGCACTAGGCTTCAATGCAGTAGTGAGCGTGAGGGTGTCAAACGAGATC 360 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------CATGAC 6 consensus_10147#4 ------------------------------------------------AACTGACTGGAC 12 consensus_10147#2 ------------------------------------CTCTGACATATTCTCTCCCCATTC 24 consensus_10147#0 ---------------------------------------------CCACCCATGCTACTC 15 consensus_10147#1 AGGTACTAATATGGTCCTTCACATGTTATTGATTCATGGAGAGCTTTCAAGTGAGTCTGT 420 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 TGAAGGAGTAGAAAA-----------AAATCCTCGCCACCTCCGCCCCAAAAATCCTCGC 55 consensus_10147#4 TGAAGGAGTAGAAAATCCCCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGC 72 consensus_10147#2 CCCATTTCCGCACCCATGCTACTCCCAAATCCCCA--ATCCCCATCCCAAAA-TCCTCGC 81 consensus_10147#0 CCAAATCCCCAATCC---CCATCCCAAAATCCTCGCCACCTCCGCCCCAAAAATCCTCGC 72 consensus_10147#1 AAGGTGCGCAGGATAGATGTTGGTCCGGGATATCAATGTTCCTCTTCCATTGCTACAGGA 480 consensus_10147#5 -------------------------------------------------------TAGGT 5 * consensus_10147#3 CGCCGACCGGCGCCGCCGTCTTCTC----GCGGAGCAAGCA-GCGAGCACTACAGCCTCC 110 consensus_10147#4 CGCCGACCGGCGCCGCCGTCTTCTC----GCGGAGCAAGCA-GCGAGCACTACAGCCTCC 127 consensus_10147#2 CACCT-CCGCCCCAAAAATTCTCGCTGCAGCGGAGCAAGCA-GCGAGCGCTACAGCCACC 139 consensus_10147#0 CGCCGACCGGCGCCGCCGTCTTCTC----GCGGAGCAAGCA-GCGAGCACTACAGCCTCC 127 consensus_10147#1 TCCATGGCTTTGCAGATGCTTTTGT--------AGCATTTGTGGGATGATGAAGGCCTTC 532 consensus_10147#5 TCCATAGCTTTGCATATGCTTTTGT--------AGCATTTATGGGATGATGGGGGCCTTC 57 * * * * **** * ** *** * consensus_10147#3 ATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCG 170 consensus_10147#4 ATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCG 187 consensus_10147#2 ATGTTGACAAGCCAGCCAGCCAGCGTTGTCGCCTTCTCACCTTACTTGCCGTCGACCCTG 199 consensus_10147#0 ATGTCGCCGAGCCAGCCAGCCAACATTGTCGTCTTCTCGCCTTACTTGCCGGCGACCCCG 187 consensus_10147#1 ATTTGTACAAATTCAC-ATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACAC-- 589 consensus_10147#5 CTTTGAGTGAATCCAC-ATAAGTGGATGGCATTTCTTCATTTTGCATAGTACAAACTA-- 114 * * * * * ** * * ** ** * * ** consensus_10147#3 TGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 230 consensus_10147#4 TGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 247 consensus_10147#2 TGCCACTTCGTCATCGTCGAGCCAGCGGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 259 consensus_10147#0 TGTCGCTTCGTCATCGTCGAGCCAGCTGTGCCGCTCCCTTCCCTTGGAGCCACTGTTCTG 247 consensus_10147#1 TACTGTTATGTGCAAATGAGGCCATATG-AACAGTTCATAACCATGAGCCTTCAATTCAT 648 consensus_10147#5 TGCAGTTAGGTGCAAATGAGCCCATATG-ACCAATTCATCGCCATGGGGCTTCAATTCAT 173 * * ** * *** * * * * * ** ** * * *** consensus_10147#3 CGCCACC--CCCTGTGGGGCCAACATCCGCCGTCGTCTTCTCGTG----GAGTCAATGGT 284 consensus_10147#4 CGCCACC--CCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTG----GAGCCAATGGT 301 consensus_10147#2 CGCCACCT-CCCTGTGGAGCCGACCGCCACCGTTGTCTTCTCGTG----GAGCCAATGGT 314 consensus_10147#0 CGCCACC--CCCTGTGGAGCCAACATCCGCCGTCGTCTTCTCGTG----GAGCCAATGGT 301 consensus_10147#1 AATAACCAGCAAGGTAATAATTAAATTTGCTCTAACATTTCTGCATTTTCTTTCAGTAAC 708 consensus_10147#5 AATATCCATCAAGGTAATAACTAAATTTGTTCTATCATTTATGCATTTTGTTTCAGTACC 233 ** * ** * * ** * ** * consensus_10147#3 CAGCACT-GCCACCAAACATCTCGTCC----ATGGCCATCTCCTCGCTTCCTGTGACTGC 339 consensus_10147#4 CAGCACT-GCCACCAAACATCTCGTCC----ATGGCCATCTCCTCGCTTCCTGTGACTGC 356 consensus_10147#2 CAGCACT-GCCACCAACCATCTCGTCC----ACGGCCATCTCCTCGCTTCTTGTGGCTGC 369 consensus_10147#0 CAGCACT-GCCACCAAACATCTCGTCC----ATGGCCATCTCCTCGCTTCCTGTGACTGC 356 consensus_10147#1 CGATGTTTATCAATGATACTCCCTTCCTGTGACTCTTAGCAATTAGCATGTTACCAACAG 768 consensus_10147#5 CAATGTTTATCAGCAA-------------------------------------------- 249 * * ** * consensus_10147#3 TGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCA-CTCTGTAT 398 consensus_10147#4 TGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCA-CTCTGTAT 415 consensus_10147#2 TGCTTGTCGGCTTCTCCACACTTCTCCAATTG---------------------------- 401 consensus_10147#0 TGCTTGTCGGCTCCTCCACACCTCTCCAATTGGTACTGCCATCCTCTACCA-CTCTGTAT 415 consensus_10147#1 GAAGTGTGGCTTTCCTATCTTTTACGCAGGTTGCACTGTTGCACTAAACCATAGGACTGC 828 consensus_10147#5 ----------------------------------------------------GGGAGTAA 257 consensus_10147#3 GCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTC 458 consensus_10147#4 GCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTTC 475 consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 GCACTAATACTTATTAGGTTCATTTTGTTTTCCTCGTATTGTTGATCTGCATAACTGTCC 475 consensus_10147#1 ATTTCTGTTCTCATCTGTTTGTGTTGTTTGTTCATCTCTCTTGAAAAGAGGTCACAAATT 888 consensus_10147#5 ATTCCCGC------------------------------------GAAGTGGTTGCCAACG 281 consensus_10147#3 TTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTAT 518 consensus_10147#4 TTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTAT 535 consensus_10147#2 ----------TAGGTATTTTACTGCTCAGATTAGCTTTGCTTTGGTCTCTATACAGGTAT 451 consensus_10147#0 TTTTCTGCAGTAGGTATTTTACTACTCAGATTACCTTTGCTTTGCTCTCTATATAGGTAT 535 consensus_10147#1 TATAATAATGCAGATCTAATCAACAAGGGAGTAAACTACCATGAGTCTTC---CAAGTTC 945 consensus_10147#5 TT------------------------------------------------------ATTT 287 * consensus_10147#3 GATTCCTACTAAT--CCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 576 consensus_10147#4 GATTCCTACTAAT--CCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 593 consensus_10147#2 GATTCCTACTAATTTCCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 511 consensus_10147#0 GATTCCTACTAAT--CCATAAATATTTCTTCTGATATGTTTGCTACCTGTACAATCGGCC 593 consensus_10147#1 TCTCTGAAGAAAATAACACATTTATCTGCAGTAACACCGTTTGTATTT-TG-AGCACAAA 1003 consensus_10147#5 TCTCCGAAGAAAAGAACACATTTATCCTCGGTAGCACCATTTGTAATT-AGGAGCCCAAA 346 * * ** ** * *** * * ** ** * * consensus_10147#3 TAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGT 636 consensus_10147#4 TAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGT 653 consensus_10147#2 TAAAGTGCAAACAACAGTCAGGTTTTCCTATTTCTTTCATAATACATGATTCCCCATTGT 571 consensus_10147#0 TAAAATGCAAACAACAATAAGGTTATCCTATTTCTTTCATAATACATGATTCCCCATTGT 653 consensus_10147#1 TTATATTCAAATTATTTTAGCAATTGTTTAATTTCTTTGGGATATATAAATTACTAATTT 1063 consensus_10147#5 TTATATTCAAATTATTTTAGCAATGGTTTAATTTCTTTGGGATAGCTTAGTTATTAATTT 406 * * * **** * * * ** ** ** *** * * * * * * consensus_10147#3 TTCAG--GGATGCATGATAGTTTTATATATATTGC------------------------- 669 consensus_10147#4 TTCAG--GGA-------------------------------------------------- 661 consensus_10147#2 TTCAG--GGATGCATGATAGTTTTATATATCTTGCTGGGATTCCATTTGTTTAGCAGCCA 629 consensus_10147#0 TTCAG--GGATGCATGATAGTTTTATATATATTGCTGGGATTCCATTTGTTTAACAGCAA 711 consensus_10147#1 TTAAAAAGGATGAATGGCATGTGTGCAT-CCCCGCTGTTTATCCATTGAACGGTCATAAT 1122 consensus_10147#5 GGAAAAAGGATGAATGTCATGGGGGTAT-CCTCGCGGTTTATCCAGGGATTGGTCA---- 461 * *** consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 TATGTGGTTATAGCACATATTTTCATTTTTTTTTACACACAGCAGAATAGCATGTACAAA 689 consensus_10147#0 T--GTGGTTATAGCACATATTTTCATTTTTTT--ACACACAGCAAAATAGCATGCACAAA 767 consensus_10147#1 ACATAGTTGACTTTATGTAAAGATACTTAACATTGTTATTGGCTCATCATTTAGATTCCT 1182 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 GAGATATTGGCCTGATTTTTT-CCCTATGTAATTGTACGATGTGACCATATACCTATGGT 748 consensus_10147#0 GAGATATTGGCCTGATTTTTTTCCCTATGTAATTGTACGATGTGACCATATACCTATGGT 827 consensus_10147#1 GCAATCTTAATAGTTCCCTTT--------------------------------------- 1203 consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 TAGTGCAGGATGCCACAAAACAATGCACCATGAAAGGTAAACCTA--------------- 793 consensus_10147#0 TAGTGCAGGATGCCACAAAACAATGCACCATGAAGGGTAAACCTATAAAAAATCATTGTG 887 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 CTACTTGTCCGATTGCACATGTTCTATTTGTGCATGCATAGGAATAATTAGTTACTGCTT 947 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 TGGTGTACATAAGATTGTTTTTTTTGCTACCTGCTTCAGTGTTCCTAATTGGCTTCATGG 1007 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 CGATACAAATGAGAAGAATGAAGTGTTGATTCAAGCTAGAAGATAATTTACTATTTCATA 1067 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 GATAATCTTGATGTTTAGTACAGAAGGCACACAATTCAACTTGATCGCAACCGCTTGCTG 1127 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 TAGTATGATGCCATGATTGCTTACATTACAAGGCCTATGTATGGACTGTCAGGTTCATGG 1187 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 TCTTCAGTGAGTGATATATTTGTTGAACTGCATGTGTAACACCTTGCTTTTGTAGGTTCC 1247 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ATGGCTTTGCATATGCTTTTGTAACATTTATGGGATGAGGGCCTTCATTTGAGTGAATAC 1307 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 ACATAAGTTGATGGCATTTCTTCATTTTGCATAGTACAAACTCTGCTGTTATGTGCAAAT 1367 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 GAGGCCATATGAACAGTTTATCACCATGAGGCTTCAATTCATAATAACCATCAAGGTAAT 1427 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 AATTAAATTTGTTCTAACATTTCTGCATTTTCTTTCAGTAACTGATGTTTATCAGCAAGG 1487 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 GAGTAAACTACCGCAAGTCTTCCAAGTTCTTCTATCTGAAGAAAAGAACACATTTATCCG 1547 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 CGGTAGCACCATTTGTAATTATGAGCACAAATTATATTCAAATTATTTTAGCAATTGTTT 1607 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ------------------------------------------------------------ consensus_10147#4 ------------------------------------------------------------ consensus_10147#2 ------------------------------------------------------------ consensus_10147#0 AATTTCTTTGGGATAGCTCAGTTATTAATTTTGAAAAAGGATGAATGTCATGTGTGCATC 1667 consensus_10147#1 ------------------------------------------------------------ consensus_10147#5 ------------------------------------------------------------ consensus_10147#3 ----------------------------------------------------------- consensus_10147#4 ----------------------------------------------------------- consensus_10147#2 ----------------------------------------------------------- consensus_10147#0 CTTGCTGTTTATCCAGTGATTGGTCATAATGCATATGTTGACTTTAAAAAAAAAAAAAA 1726 consensus_10147#1 ----------------------------------------------------------- consensus_10147#5 ----------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||