These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10149#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1360 fasta sequence [GTCGCCTCTCGTCTTTTTTCCCGTGCAACGTTGCAAGTGAAATCATCAATCGTGCGTGCGCTGCGCCCGACCATGGAGCTCGCGGTCAGAGCAGCCGCCGCGGCCTCCTGCTCCTCCGGCGCCTCGCTCCAGCTCCCGCGGGCCCGAGCCCCGCTCCGCCTCCTTGGCCACCGCCGCCTCCCCGCTCGCCGGGTGGCTGTCGAGGCCGCCGCGATCGCCGTCGAGCCGGAAAACAAAGTACCGCAGAGTAACAATTCAGAAGCCGAGGTGTTTGCATGCCCTGTTTGCTATGAGCCATTGATAAGGAAAGGCCCATCGGGCATAAACTTGCCATCAATTTATAGGTCTGGGTTCAAATGTTCAAAGTGCAACAAGTCATTCACCAGCAAAGATATCTTCTTGGATCTCACTGTCACTTCTGGAACAAAAGAATATAGTGAATTGAAGCCAGCTAGAACTGAGCTGTTCAGGAGCCCACTCGTCTCATTTCTTTATGAAAGAGGGTGGCGTCAAAATTTCAATCGAAGTGGATTCCCTGGACTTGACGAAGAGTTTCAAATGGCTCAAGATTATTTCCAATCAGTTGCTGGTGGTGTACTTCTTGATGTAAGCTGTGGCAGTGGCTTGTTCACAAGAAAATTTGCAAAATCTGGATCGTACTCAGCTGTGATTGCTTTGGACTTCTCCGAGAATATGCTTTG-CCAGTGTTATGAATTTATTCAGCAAGATGATACTCTTGTAAACACAAATCTTGCTCTTGTAAGGGCAGATATTTCGAGACTCCCTTTTGCTTCATCTTCAATTGATGCCATTCATGCTGGAGCTGCTATCCACTGCTGGCCCTCCCCTTCGAATGCGGTGGCTGAAATAAGTCGAGTCCTGAGGCCTGGTGGTGTCTTTGTAGCAACAACCTTCTTATCTTCTCCCAGG-AACAATCCCTTCTCTGTTGAAGCGTTGCGGCCACTGAGACAGATTGTTGGACCAGTTAACACCAGCTACAATTACTTCACCGAAGGA-GAGCTCGAAGACTTGTGCAAATCCTGCGGTCTTGTTAATTACAGCAGCAAGGTCCAGAGGTCGTTCATCATGTTTTCTGGGCAGAAGCCGTAGCCTAAAATTACATCAAAACCTTTGTAGCCAAAGTATAGCTGTCAATTCTACAAAAGTCTTTGTAAAATGCCATTCACCGATACCTGCATAGATTAGACCCAGCAGAAGTTTTTGCTTGGAATTCCTCTCCCTGTTATGAAGATATAGTTGTCACATGTATACTGTGCTTCAGTACAGTGATGTACCACAGCCAGGGTGTATTTCACACCTGGAAGAAAAAAAAAACGTTCTAGTACTAAAAAAAAAAAGA] [+] EMBL AK068674 [GTCGCCTCTCGTCTTTTTTCCCGTGCAACGTTGCAAGTGAAATCATCAATCGTGCGTGCGCTGCGCCCGACCATGGAGCTCGCGGTCAGAGCAGCCGCCGCGGCCTCCTGCTCCTCCGGCGCCTCGCTCCAGCTCCCGCGGGCCCGAGCCCCGCTCCGCCTCCTTGGCCACCGCCGCCTCCCCGCTCGCCGGGTGGCTGTCGAGGCCGCCGCGATCGCCGTCGAGCCGGAAAACAAAGTACCGCAGAGTAACAATTCAGAAGCCGAGGTGTTTGCATGCCCTGTTTGCTATGAGCCATTGATAAGGAAAGGCCCATCGGGCATAAACTTGCCATCAATTTATAGGTCTGGGTTCAAATGTTCAAAGTGCAACAAGTCATTCACCAGCAAAGATATCTTCTTGGATCTCACTGTCACTTCTGGAACAAAAGAATATAGTGAATTGAAGCCAGCTAGAACTGAGCTGTTCAGGAGCCCACTCGTCTCATTTCTTTATGAAAGAGGGTGGCGTCAAAATTTCAATCGAAGTGGATTCCCTGGACTTGACGAAGAGTTTCAAATGGCTCAAGATTATTTCCAATCAGTTGCTGGTGGTGTACTTCTTGATGTAAGCTGTGGCAGTGGCTTGTTCACAAGAAAATTTGCAAAATCTGGATCGTACTCAGCTGTGATTGCTTTGGACTTCTCCGAGAATATGCTTTG CCAGTGTTATGAATTTATTCAGCAAGATGATACTCTTGTAAACACAAATCTTGCTCTTGTAAGGGCAGATATTTCGAGACTCCCTTTTGCTTCATCTTCAATTGATGCCATTCATGCTGGAGCTGCTATCCACTGCTGGCCCTCCCCTTCGAATGCGGTGGCTGAAATAAGTCGAGTCCTGAGGCCTGGTGGTGTCTTTGTAGCAACAACCTTCTTATCTTCTCCCAGG AACAATCCCTTCTCTGTTGAAGCGTTGCGGCCACTGAGACAGATTGTTGGACCAGTTAACACCAGCTACAATTACTTCACCGAAGGA GAGCTCGAAGACTTGTGCAAATCCTGCGGTCTTGTTAATTACAGCAGCAAGGTCCAGAGGTCGTTCATCATGTTTTCTGGGCAGAAGCCGTAGCCTAAAATTACATCAAAACCTTTGTAGCCAAAGTATAGCTGTCAATTCTACAAAAGTCTTTGTAAAATGCCATTCACCGATACCTGCATAGATTAGACCCAGCAGAAGTTTTTGCTTGGAATTCCTCTCCCTGTTATGAAGATATAGTTGTCACATGTATACTGTGCTTCAGTACAGTGATGTACCACAGCCAGGGTGTATTTCACACCTGGAAGAAAAAAAAAcg ] [+] EMBL AK104339 [ TGCAAGTGAAATCATCAATCGTGTGTGCGCTGCGCCCGACCATGGAGCTCGCGGTCAGAGCAGCCGCCGCGGCCTCCTGCTCCTCCGGCGCCTCGCTCCAGCTCCCGCGGGCCCGAGCCCCGCTCCGCCTCCTTGGCCACCGCCGCCTCCCCGCTCGCCGGGTGGCTGTCGAGGCCGCCGCGATCGCCGTCGAGCCGGAAAACAAAGTACCGCAGAGTAACAATTCAGAAGCCGAGGTGTTTGCATGCCCTGTTTGCTATGAGCCATTGATAAGGAAAGGCCCATCGGGCATAAACTTGCCATCAATTTATAGGTCTGGGTTCAAATGTTCAAAGTGCAACAAGTCATTCACCAGCAAAGATATCTTCTTGGATCTCACTGTCACTTCTGGAACAAAAGAATATAGTGAATTGAAGCCAGCTAGAACTGAGCTGTTCAGGAGCCCACTCGTCTCATTTCTTTATGAAAGAGGGTGGCGTCAAAATTTCAATCGAAGTGGATTCCCTGGACTTGACGAAGAGCTTCAAATGGCTCAAGATTATTTCCAATCAGTTGCTGGTGGTGTACTTCTTGATGTAAGCTGTGGCAGTGGCTTGTTCACAAGAAAATTTGCAAAATCTGGATCGTACTCAGCTGTGATTGCTTTGGACTTCTCCGAGAATATGCTTTG CCAGTGTTATGAATTTATTCAGCAAGATGATACTCTTGTAAACACAAATCTTGCTCTTGTAAGGGCAGATATTTCGAGACTCCCTTTTGCTTCATCTTCAATTGATGCCATTCATGCTGGAGCTGCTATCCACTGCTGGCCCTCCCCTTCGAATGCGGTGGCTGAAATAAGTCGAGTCCTGAGGCCTGGTGGTGTCTTTGTAGCAACAACCTTCTTATCTTCTCCCAGG AACAATCCCTTCTCTGTTGAAGCGTTGCGGCCACTGAGACAGATTGTTGGACCAGTTAACACCAGCTACAATTACTTCACCGAAGGA GAGCTCGAAGACTTGTGCAAATCCTGCGGTCTTGTTAATTACAGCAGCAAGGTCCAGAGGTCGTTCATCATGTTTTCTGGGCAGAAGCCGTAGCCTAAAATTACATCAAAACCTTTGTAGCCAAAGTATAGCTGTCAATTCTACAAAAGTCTTTGTAAAATGCCATTCACCGATACCTGCATAGATTAGACCCAGCAGAAGTTTTTGCTTGGAATTCCTCTCCCTGTTATGAAGATATAGTTGTCACATGTATACTGTGCTTCAGTACAGTGATGTACCACAGCCAGGGTGTATTTCA ] [+] EMBL CB620555 [ gtccctTGCGCCCGACCATGGAGCTCGCGGTCAGAGCAGCCGCCGCGGCCTCCTGCTCCTCCGGCGCCTCGCTCCAGCTCCCGCGGGCCCGAGCCCCGCTCCGCCTCCTCGGCCACCGCCGCCTCCCCGCTCGCCGGGTGGCTGTCGAGGCCGCCGCGATCGCCGTCGAGCCGGAAAACAAAGTACCGCAGAGTAACAATTCAGAAGCCGAGGTGTTTGCATGCCCTGTTTGCTATGAGCCATTGATAAGGAAAGGCCCATCGGGCATAAACTTGCCATCAATTTATAGGTCTGGGTTCAAATGTTCAAAGTGCAACAAGTCATTCACCAGCAAAGATATCTTCTTGGATCTCACTGTCACTTCTGGAACAAAAGAATATAGTGAATTGAAGCCAGCTAGAACTGAGCTGTTCAGGAGCCCACTCGTCTCATTTCTTTATGAAAGAGGGTGGCGTCAAAATTTCAATCGAAGTGGATTCCCTGGACTTGACGAAGAGTTTCAAATGGCTCAAGATTATTTCCAATCAGTTGCTGGTGGTGTACTTCTTGATGTAAGCTGTGGCAGTGGCTTGTTCACAAGAAAATTTGCAAAATCTGGATCGTACTCAGCTGTGATTGCTTTGGACTTCTCCGAGAATATGCTTTG CCAGTGTTATGAATTTATTCAGCAAGATGATACTCTTGTAAACACAAATCTTGCTCTTGTAAGGGCAGATATTTCGAGACTCCCTTTTGCTTCATCTTCAATTGATGCCATTCATG ] [+] EMBL CA765842 [ TCATTCACCAGCAAAGATATCTTCTTGGATCTCACTGTCACTTCTGGAACAAAAGAATATAGTGAATTGAAGCCAGCTAGAACTGAGCTGTTCAGGAGCCCACTCGTCTCATTTCTTTATGAAAGAGGGTGGCGTCAAAATTTCAATCGAAGTGGATTCCCTGGACTTGACGAAGAGTTTCAAATGGCTCAAGATTATTTCCAATCAGTTGCTGGTGGTGgtnac ] [+] EMBL C27266 [ ATGCTTTG CCAGTGTTATGAATTTATTCAGCAAGATGATACTCTTGTAAACACAAATCTTGCTCTTGTAAGGGCAGATATTTCGAGACTCCCTTTTGCTTCATCTTCAATTGATGCCATTCATGCTGGAGCTGCTATCCACTGCTGGCCCTCCCCTTCGAATGCGGTGGCTGAAATAAGTCGAGTCCTGAGGCCTGGTGGTGTCTTTGTAGCAACAACCTTCTTATCTTCTCCCAGG AACAATCCCTTCTCTGTTGAAGCGTTGCGGCCACTGAGACAGATTGTTGGACCAGTTAACACCAGCTACAATTACTTCACCG AGGAGGAGCTCGAAGACTTGTGCAAATNCTGCGGTCTTGTTAATTACAGCAGCAAGGTCCAGAGGTCGTTCATCATGTTTTCTGGGCAGAAGCCGTAGCCTAAAATTACATC AAACCTTTGTA ] [+] EMBL AU085709 [ TGCTTTGCCCAGTGTTATGAATTTATTCAGCAAGATGATACTCTTGTAAACACAAATCTTGCTCTTGTAAGGGCAGATATTTCGAGACTCCCTTTTGCTTCATCTTCAATTGATGCCATTCATGCTGGAGCTGCTATCCACTGCTGGCCCTCCCCTTCGAATGCGNTGGCTGAAATAAGTCGAGTCCTGAGGCCTGGTGGTGTCTTTGTAGCAAC ACNTTCTTATCTTCTCCCAGGAAACAATCCCTTCTCTGTTGAAGCGTTGCGGCCACTGAGACAGATTGTTGGACCAGTTAACACCAGCTAC ATTACTTCACCGAAGGA GAGCTCGAAGACTTGTGCAAATCCTGCGGTCTTGTTAATTACAGCAGCAAGGTCCAGAGGTCGTTCATCATGTTTTCTGGGCAGAAGCCGTAGCCTAAAATTACATCAAAACCTTTGTAGCCAAAGTATAGCTGTCAATTCTACAAAAGTCTTTGTAAAATGCCATTCACCGATACCTGCATAGATTAGACCCAGCAGAAGTTTTTGCTTGGAATTCCTCTCCCTGTTATGAAGATATAGTTGTCACATGTATACTGTGCTTCAGTACAGTGATGTACCACAGCCAGGGTGTATTTCACACCTGGAAGAAAAAAAAAACGTTCTAGTACTAAAAAAAAA ] [-] EMBL CB620556 [ AGTCCTGAGGCCTGGTGGTGTCTTTGTAGCAACAACCTTCTTATCTTCTCCCAGG AACAATCCCTTCTCTGTTGAAGCGTTGCGGCCACTGAGACAGATTGTTGGACCAGTTAACACCAGCTACAATTACTTCACGGAAGGA GAGCTGGAAGACTTGTGCAAATCCTGCGGTCTTGTTAATTACAGCAGCAAGGTCCAGAGGTCGTTCATCATGTTTTCTGGGCAGAAGCCGTAGCCTAAAATTACATCAAAACCTTTGTAGCCAAAGTAAAGCTGTCAATTTTACAAAAGTCTTTGTAAAATGCCATTCACGGATACCTGCATAGATTAGACCCAGCAGAAGTTTTTGCTGGGAATTCCTCTCCCTGTTAGGAAGATATAGTTGTCACATGTATACTGTGCTTCAGTACAGGGAGGTACCACAGCCGGGGGGTATTTCACACCGGGAAGAAAAAAAAAACGTTCTAGTCCTAAAAAAAAAAAGA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||