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Oryza sativa
cluster # 10174 cluster # 10174       Sequences # 7       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10174#0 length = 868 sequences # 3  
consensus_10174#1 length = 770 sequences # 1  
consensus_10174#2 length = 640 sequences # 1  
consensus_10174#3 length = 518 sequences # 1  
consensus_10174#4 length = 245 sequences # 1  

consensusID : consensus_10174#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 868
fasta sequence
                              [CCCTCCTTCTCCGCGTGCGCCCATCCATCCCAACTCCCCAACCAAGCAGCGGCGAGCCAGCGATGGCGACACCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTATCTATACCTTCTATATAGTTGGTATAATTGGTACCCACTAGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGGGGCGCCGAATATATATGTTGCCTCAGACACGACCA]

[+] EMBL AK068184             [CCCTCCTTCTCCGCGTGCGCCCATCCATCCCAACTCCCCAACCAAGCAGCGGCGAGCCAGCGATGGCGACACCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGGCGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTATCTATACCTTCTATATAGTTGGTATAATTGGTACCCACTAGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGGGGCGCCGAATATATATGTTGCCTCAGACACGACCA]
[+] EMBL AK069334             [CCCTCCTTCTCCGCGTGCGCCCATCCATCCCAACTCCCCAACCAAGCAGCGGCGAGCCAGCGATGGCGACACCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTATCTATACCTTCTATATAGTTGGTATA                                                                                                            ]
[+] EMBL CB676906             [                                   CCCCACCTAAGCAGCGGCGAGCCAGCGATGGCGACACCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACAAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTATCTAT                                                                                                                                 ]


>consensus_10174#0 CCCTCCTTCTCCGCGTGCGCCCATCCATCCCAACTCCCCAACCAAGCAGCGGCGAGCCAG CGATGGCGACACCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCC TCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCA CCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGC GCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCC GGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGC TCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGT GGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCT CCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACT CTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTT CAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTG AAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTA CTGTAGCTCTTGTATCTATACCTTCTATATAGTTGGTATAATTGGTACCCACTAGTTGTG TTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGGGGCGCCG AATATATATGTTGCCTCAGACACGACCA



consensusID : consensus_10174#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 770
fasta sequence
                              [GCCAACTCCCCAACCAAGCAGCGGCGAGCCAGCGATGGCGACGCCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTAGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGAGGGGAGCTACCTCTGAGCCTACAGAGACCGGCTAATGGGCCGGCTCGACGAGCCCGCAGATGTAACGCCTAATGGGGTGCGAGGTAGGGAATATAAGAGAAGAGGACCATCGTCGGGATAACGGGTAAAAAGGGCGAGGACGGGTGTGGAGGTCTTATTTTGCTACGTTGAAGTCAGAGCGACGCCTGCAAAGGTAGAGGATCGAAGGAGCAAGAGAAGTGAGTGGGTGCGCGAATGAGGACATGCGACATGGGTTGATGACGGATAGAGGAGAGAGATACTAGAGGGGAGATGAAGTGGAGAGAGCCGAAAAGAAGAATATAGAACGAGAGAGAGAATAGAATATCAAAAACAAGAGTGAGAGGATAAAAAGAGAAGGAAATAGAGGAAGAAAAAGAGAGCAAGAAAATGCAAAAAGAAAGCAACAATCACAAAACAGCACGACACTAGAAAAAAATATAAATATAAACAAGAAACCAGCT]

[+] EMBL BE040806             [GCCAACTCCCCAACCAAGCAGCGGCGAGCCAGCGATGGCGACGCCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTAGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGAGGGGAGCTACCTCTGAGCCTACAGAGACCGGCTAATGGGCCGGCTCGACGAGCCCGCAGATGTAACGCCTAATGGGGTGCGAGGTAGGGAATATAAGAGAAGAGGACCATCGTCGGGATAACGGGTAAAAAGGGCGAGGACGGGTGTGGAGGTCTTATTTTGCTACGTTGAAGTCAGAGCGACGCCTGCAAAGGTAGAGGATCGAAGGAGCAAGAGAAGTGAGTGGGTGCGCGAATGAGGACATGCGACATGGGTTGATGACGGATAGAGGAGAGAGATACTAGAGGGGAGATGAAGTGGAGAGAGCCGAAAAGAAGAATATAGAACGAGAGAGAGAATAGAATATCAAAAACAAGAGTGAGAGGATAAAAAGAGAAGGAAATAGAGGAAGAAAAAGAGAGCAAGAAAATGCAAAAAGAAAGCAACAATCACAAAACAGCACGACACTAGAAAAAAATATAAATATAAACAAGAAACCAGCT]


>consensus_10174#1 GCCAACTCCCCAACCAAGCAGCGGCGAGCCAGCGATGGCGACGCCCACTGCCCAAACCGC GGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGGCCCTCCCGGTCGT CCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGG GTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTAGGG GGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGAGGGGAGCTACCT CTGAGCCTACAGAGACCGGCTAATGGGCCGGCTCGACGAGCCCGCAGATGTAACGCCTAA TGGGGTGCGAGGTAGGGAATATAAGAGAAGAGGACCATCGTCGGGATAACGGGTAAAAAG GGCGAGGACGGGTGTGGAGGTCTTATTTTGCTACGTTGAAGTCAGAGCGACGCCTGCAAA GGTAGAGGATCGAAGGAGCAAGAGAAGTGAGTGGGTGCGCGAATGAGGACATGCGACATG GGTTGATGACGGATAGAGGAGAGAGATACTAGAGGGGAGATGAAGTGGAGAGAGCCGAAA AGAAGAATATAGAACGAGAGAGAGAATAGAATATCAAAAACAAGAGTGAGAGGATAAAAA GAGAAGGAAATAGAGGAAGAAAAAGAGAGCAAGAAAATGCAAAAAGAAAGCAACAATCAC AAAACAGCACGACACTAGAAAAAAATATAAATATAAACAAGAAACCAGCT



consensusID : consensus_10174#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 640
fasta sequence
                              [CCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTAAGGATACCTTCTATATAGTTGGTATAATTGGTACCCCCATAAAGGA]

[-] EMBL CB676907             [CCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTAAGGATACCTTCTATATAGTTGGTATAATTGGTACCCCCATAAAGGA]


>consensus_10174#2 CCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCACCGCGTACGACGAGCTCCGG CACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCGAACGTGCGCGGGTACACGCTGGACTCC GGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTGCCGGATCGTGCTCCCCGCGGGG AGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCGGCTCGACGACCGCCGCATCTCC GGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGC GCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCAAGTTCCCCGCCCGC CACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAGCCGACTCTTAGTACAAAGGTCCTGGT GTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTG TTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCC AGTCGCCCCACGCAAACAAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTAAGGATA CCTTCTATATAGTTGGTATAATTGGTACCCCCATAAAGGA



consensusID : consensus_10174#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 518
fasta sequence
                              [GGGCCGGCTCTGACTGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCCAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCCAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACCAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTATCTATACCTTCTATGTAGTTGGTATAATTGGTACCCACTAGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGGGGCGCCCAATATATATGTTGCCTCCAAAAAAAAAA]

[+] EMBL BM420908             [GGGCCGGCTCTGACTGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTCGGCTCCGTCTCCGCCCAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCCAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCGGCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACCAAGTGGAACAGAACAATGCGTACTGTAGCTCTTGTATCTATACCTTCTATGTAGTTGGTATAATTGGTACCCACTAGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGGGGCGCCCAATATATATGTTGCCTCCAAAAAAAAAA]


>consensus_10174#3 GGGCCGGCTCTGACTGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTC TTCCGGTGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCTTCGAGGTC GGCTCCGTCTCCGCCCAGTTCCCCGCCCGCCACTTCAACGCCAGCCTCGAGTGCCCCGCC CAAGCCGACTCTTAGTACAAAGGTCCTGGTGTCTATTCCTTGATATGGCATCATGAAGCG GCTTAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTG TATAAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACCAAGTGGAACAGA ACAATGCGTACTGTAGCTCTTGTATCTATACCTTCTATGTAGTTGGTATAATTGGTACCC ACTAGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACT CGGGGCGCCCAATATATATGTTGCCTCCAAAAAAAAAA



consensusID : consensus_10174#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 245
fasta sequence
                              [GCCGCTCTCCCCAACCAAGCAGCGGCGTAGCCAGCGATGCGAGACGCCACTGCCCAAACCGCGGCGCTCCTCGCGCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGCGCCTCCCGGTCGCTCGCTCCGACGCCGGCGCATCGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCCGTGGGCTTGCTGCCGGCGTAACGTGCGCGGGTTACACGTGGACTCCGGGTCGGGGACTTC]

[+] EMBL OS31691              [GCCGCTCTCCCCAACCAAGCAGCGGCGTAGCCAGCGATGCGAGACGCCACTGCCCAAACCGCGGCGCTCCTCGCGCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGCGCCTCCCGGTCGCTCGCTCCGACGCCGGCGCATCGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCCGTGGGCTTGCTGCCGGCGTAACGTGCGCGGGTTACACGTGGACTCCGGGTCGGGGACTTC]


>consensus_10174#4 GCCGCTCTCCCCAACCAAGCAGCGGCGTAGCCAGCGATGCGAGACGCCACTGCCCAAACC GCGGCGCTCCTCGCGCGCCGCCGCGCTCTTCCTCCTCGCGTCGGCGCGCCTCCCGGTCGC TCGCTCCGACGCCGGCGCATCGCGACGTCACCGCGTACGACGAGCTCCGGCACCGCGGGT TCCCCGTGGGCTTGCTGCCGGCGTAACGTGCGCGGGTTACACGTGGACTCCGGGTCGGGG ACTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10174#2      ------------------------------------------------------------
consensus_10174#3      ------------------------------------------------------------
consensus_10174#0      CCCTCCTTCTCCGCGTGCGCCCATCCATCCCAACTCCCCAACCAAGCAGCGGCGAGCCAG 60
consensus_10174#1      -------------------------GCCAA-CTCCCCAACCAAGCAGCGGCG-AGCCAGC 33
consensus_10174#4      -------------------------GCCGCTCTCCCCAACCAAGCAGCGGCGTAGCCAGC 35
                                                                                   

consensus_10174#2      ------------------------------------------------------------
consensus_10174#3      ------------------------------------------------------------
consensus_10174#0      CGATGGCGACACCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCC 120
consensus_10174#1      GATG-GCGACGCCCACTGCCCAAACCGCGGCGCTCCTCGCCGCCGCCGCCGCGCTCTTCC 92
consensus_10174#4      GATGCGAGACGCC-ACTGCCCAAACCGCGGCGCTCCTCGCG--CGCCGCCGCGCTCTTCC 92
                                                                                   

consensus_10174#2      --------------------CCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCA 40
consensus_10174#3      ------------------------------------------------------------
consensus_10174#0      TCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCA 180
consensus_10174#1      TCCTCGCGTCGGCGGCCCTCCCGGTCGTCCGCTCCGACGCCGGCGGCGACGGCGACGTCA 152
consensus_10174#4      TCCTCGCGTCGGCGCGCCTCCCGGTCGCTCGCTCCGACGCCGGCGC--ATCGCGACGTCA 150
                                                                                   

consensus_10174#2      CCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCG-AACGTG 99
consensus_10174#3      ------------------------------------------------------------
consensus_10174#0      CCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCG-AACGTG 239
consensus_10174#1      CCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCGCTGGGCTTGCTGCCGGCG-AACGTG 211
consensus_10174#4      CCGCGTACGACGAGCTCCGGCACCGCGGGTTCCCCGTGGGCTTGCTGCCGGCGTAACGTG 210
                                                                                   

consensus_10174#2      CGCGGGT-ACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTG 158
consensus_10174#3      ------------------------------------------------------------
consensus_10174#0      CGCGGGT-ACACGCTGGACTCCGGGTCGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTG 298
consensus_10174#1      CGCGGGT-ACACGCTGGACTCCGGGTAGGGGGACTTCGCCGTGGACCTCGCCTCCAGCTG 270
consensus_10174#4      CGCGGGTTACACG-TGGACTCCGGGTCGGGG-ACTTC----------------------- 245
                                                                                   

consensus_10174#2      CCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCG 218
consensus_10174#3      ------------------------------------------------------GGGCCG 6
consensus_10174#0      CCGGATCGTGCTCCCCGCGGGGAGCTACCTCGCCTCCTTCAGCGACCGCCTCACGGGCCG 358
consensus_10174#1      CCGGATCGTGCTCCCCGAGGGGAGCTACCTCTGAGCCTACAGAGACCGGCTAATGGGCCG 330
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      GCTC-GAC-GACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGG 276
consensus_10174#3      GCTCTGACTGACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGG 66
consensus_10174#0      GCTC-GAC-GACCGCCGCATCTCCGGCCTCAGCGGCATCCGCGTCAGGGCCTTCTTCCGG 416
consensus_10174#1      GCTC-GACGAGCCCGCAGATGTAACGCCT-AATGGGGTGCGAGGTAGGGAATA-TAAGAG 387
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      TGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCT-TCGAGGTCGGCTC 335
consensus_10174#3      TGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCT-TCGAGGTCGGCTC 125
consensus_10174#0      TGGTGGTCCATCACCGGGATCCGCGCCGACGGCGACGAGCTCGTCT-TCGAGGTCGGCTC 475
consensus_10174#1      AAGAGGACCATCGTCGGGATAACGGGTAAAAAGGGCGAGGACGGGTGTGGAGGTCTTATT 447
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      CGTCTCCGCCAAGTTCCCCGCC-CGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAG 394
consensus_10174#3      CGTCTCCGCCCAGTTCCCCGCC-CGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCCAAG 184
consensus_10174#0      CGTCTCCGCCAAGTTCCCCGCC-CGCCACTTCAACGCCAGCCTCGAGTGCCCCGCCAAAG 534
consensus_10174#1      TTGCTACGTTGAAGTCAGAGCGACGCCTGCAAAGGTAGAGGATCGAAGGAGCAAGAGAAG 507
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      CCGACTCTTAGTACAAAGGTCCTGGTGTC-TATTCCTTGATATGGCATCATGAAGCGGCT 453
consensus_10174#3      CCGACTCTTAGTACAAAGGTCCTGGTGTC-TATTCCTTGATATGGCATCATGAAGCGGCT 243
consensus_10174#0      CCGACTCTTAGTACAAAGGTCCTGGTGTC-TATTCCTTGATATGGCATCATGAAGCGGCT 593
consensus_10174#1      T-GAGTGGGTGCGCGAATGAGGACATGCGACATGGGTTGATGACGGATAGAGGAGAG--- 563
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      TAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTAT 513
consensus_10174#3      TAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTAT 303
consensus_10174#0      TAGGCTTCAGGCTTTCAGTGTTCTCTGTTTCTTCGCACCTGTCTGTAATTATTCGTGTAT 653
consensus_10174#1      -AGATACTAGAGGGGAGATGAAGTGGAGAGAGCCGAAAAGAAGAATA-TAGAACGAGAGA 621
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      AAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACA 573
consensus_10174#3      AAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACCAAGTGGAACAGAACA 363
consensus_10174#0      AAGGCTGAAATGCTGAATTGTTCAGCCAGTCGCCCCACGCAAACAAAGTGGAACAGAACA 713
consensus_10174#1      GAGAATAGAATATCAAAAACAAGAGTGAGAGG----ATAAAAAGAGAAGGAAATAGAGGA 677
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      ATGCGTACTGTAGCTCTTGTAAGGATACCTTCTATATAGTTGGTATAATTGGTACCCCCA 633
consensus_10174#3      ATGCGTACTGTAGCTCTTGTATCTATACCTTCTATGTAGTTGGTATAATTGGTACCCACT 423
consensus_10174#0      ATGCGTACTGTAGCTCTTGTATCTATACCTTCTATATAGTTGGTATAATTGGTACCCACT 773
consensus_10174#1      A-GAAAAAGAGAGCAAGAAAATGCAAAAAGAAAGCAACAATCACAAAACAGCACGACACT 736
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      TAAAGGA----------------------------------------------------- 640
consensus_10174#3      AGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGG 483
consensus_10174#0      AGTTGTGTTGGTAGTTGTTACCCATGTCCATGTATCGTCGTTTCAGTCCGAAAGACTCGG 833
consensus_10174#1      AGAAAAAAATATAAATATAAACAAGAAACCAGCT-------------------------- 770
consensus_10174#4      ------------------------------------------------------------
                                                                                   

consensus_10174#2      -----------------------------------
consensus_10174#3      GGCGCCCAATATATATGTTGCCTCCAAAAAAAAAA 518
consensus_10174#0      GGCGCCGAATATATATGTTGCCTCAGACACGACCA 868
consensus_10174#1      -----------------------------------
consensus_10174#4      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)