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Oryza sativa
cluster # 10185 cluster # 10185       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10185#0 length = 1877 sequences # 5  
consensus_10185#1 length = 712 sequences # 1  
consensus_10185#2 length = 625 sequences # 1  

consensusID : consensus_10185#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1877
fasta sequence
                              [ATCCCCCGACGCCCCCGCATCGCCGCTTCACCCCGACACCCCGCGCGACCTAGTGCGCAACGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAAACAGGTGGCGGCGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCCCCATCCCTACGAGCAAACGCCGCCGGCACACGGGGACTGAGGGAGGCGGCTGCGGGCGAGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGTAGCTGACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGAAACAGTCCACAATGACAACTCCACTCCCTGTCAGTGCTGGTGATGCTTCACGAGTCCTCTTCACTGGCATTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGCCACCCTGGTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCACCTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGACCGAACAATCTTTATTGACACTGCCCCCACACCCCGAGGCCCAATACGTGCACTGCTTCGCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTCACCGGAAAGAGTCCTTCTATGACCAGCTACCCATGGTTGTCAGCTACAGTGGTGGCCTCATCCTGCTCACTGGCAATGAAAATAACTACTATGTCTGCAACCCATTCACTGGAGATACTTTCCTTCTACCAGTTCCGAAGCCCCAACTCCGCAATGCTGAAAGCTTGGGCATTGTTGCTCGGGATGGTGAGTATGTGGTTGCTGAACTCATGATGTCCTGTCTACGTTCCTTCTCATCAGTAAATGGCCGTTGGGAGGAGAAGCCTCTCGTATGCCCTCAATTCTCCAGGGGTGACATGGTATTCTCCTCTGGTGGGATGCTTCATTGGGTTGATCTCAACTGTGGCATACTCTCCTGTGACCCATTTGCATCAGAACCAACTGTACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGACCCACCCGTGGCCTGGATGAATGGATCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAAAGCAAATTCTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTGGATCTTCTCCTCCAATTGCTTGCGTGGTGCCCCCTTTACCGCACTTGGTGTCTCCCTATCCGTCATGTTTAAGGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGACAAGCCCCAAAAGTCTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATTGAGTTCATGTCATCGGTTTTATCATTGATGAGTTGAAAAGTATCTCTACTGATCATGTGCGGTCCTAATCTCTTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCTTATCAGTTCAGCTAAACTTATGTATCGTTTGAACCTTTTAGCGTCATATGTATCGTTTGAACACCTCTTTGTTGAACGAAATGAAGACTAAA]

[+] EMBL AK066309             [ATCCCCCGACGCCCCCGCATCGCCGCTTCACCCCGACACCCCGCGCGACCTAGTGCGCAACGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAAACAGGTGGCGGCGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCCCCATCCCTACGAGCAAACGCCGCCGGCACACGGGGACTGAGGGAGGCGGCTGCGGGCGAGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGTAGCTGACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGAAACAGTCCACAATGACAACTCCACTCCCTGTCAGTGCTGGTGATGCTTCACGAGTCCTCTTCACTGGCATTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGCCACCCTGGTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCACCTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGACCGAACAATCTTTATTGACACTGCCCCCACACCCCGAGGCCCAATACGTGCACTGCTTCGCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTCACCGGAAAGAGTCCTTCTATGACCAGCTACCCATGGTTGTCAGCTACAGTGGTGGCCTCATCCTGCTCACTGGCAATGAAAATAACTACTATGTCTGCAACCCATTCACTGGAGATACTTTCCTTCTACCAGTTCCGAAGCCCCAACTCCGCAATGCTGAAAGCTTGGGCATTGTTGCTCGGGATGGTGAGTATGTGGTTGCTGAACTCATGATGTCCTGTCTACGTTCCTTCTCATCAGTAAATGGCCGTTGGGAGGAGAAGCCTCTCGTATGCCCTCAATTCTCCAGGGGTGACATGGTATTCTCCTCTGGTGGGATGCTTCATTGGGTTGATCTCAACTGTGGCATACTCTCCTGTGACCCATTTGCATCAGAACCAACTGTACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGACCCACCCGTGGCCTGGATGAATGGATCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAAAGCAAATTCTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTGGATCTTCTCCTCCAATTGCTTGCGTGGTGCCCCCTTTACCGCACTTGGTGTCTCCCTATCCGTCATGTTTAAGGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGACAAGCCCCAAAAGTCTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATTGAGTTCATGTCATCGGTTTTATCATTGATGAGTTGAAAAGTATCTCTACTGATCATGTGCGGTCCTAATCTCTTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCTTATCAGTTCAGCTAAACTTATGTATCGTTTGAACCTTTTAGCGTCATATGTATCGTTTGAACACCTCTTTGTTGAACGAAATGAAGACTA  ]
[+] EMBL CB647048             [                                         CGCGCCATCTAGTGCGCAACGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAAACAGGTGGCGGCGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCCCCATCCCTACGAGCAAACGCCGCCGGCACACGGGGACTGAGGGAGGCGGCTGCGGGCGAGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGTAGCTGACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGAAACAGTCCACAATGACAACTCCACTCCCTGTCAGTGCTGGTGATGCTTCACGAGTCCTCTTCACTGGCATTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGCCACCCTGGTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCACCTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGACCGAACAATCTTTATTGACACTGCCCCCACACCCCGAGGCCCAATACGTGCACTGCTTCGCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTCACCGGAAAGAGTCCTTCTATGACCAGCTACCCATGGTTGTCAGCTACAGTGGTGGCCTCATCCTGCTCACTGGCAATGAAAATAACTACTATGTCTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB628418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTGTCTCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTTTCAGGACTGCCTCTTCAACATCGATTTGAAGACAAAGCAAATTTTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTGGATCTTCTCCTCCAATTGCTTGCGTGGTGCCCCCTTTACCGCACTTGGTGTCTCCCTATCCGTCATGTTTAAGGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGACAAGCCCCAAAAGTTTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATTGAGTTCATGTCATCGGTTTTATCATTGATGAGTTGAAAAGTATCTTTACTGATCATGTGCGGTCCTAATCTCTTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCTTATCAGTTCAGCTAAACTTATGTATCGTTTGAACCTTTTAGCGTCATATGTATCGTTTGAACCCCTCTTTGTTGAACGAAATGAAGACTAAA]
[-] EMBL CB647049             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAAAGCAAATTCTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTGGATCTTCTCCTCCAATTGCTTGCGTGGTGCCCCCTTTACCGCACTTGGTGTCTCCCTATCCGTCATGTTTAAGGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGACAAGCCCCAAAAGTCTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATTGAGTTCATGTCATCGGTTTTATCATTGATGAGTTGAAAAGTATCTCTACTGATCATGTGCGGTCCTAATCTCTTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCTTATCAGTTCAGCTAAACTTATGTATCGTTTGAACCTTTTAGCGTCATATG                                          ]
[-] EMBL CB672352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gtgGGGAACAGTGGGGAGTGGGTTTTGGAATACAAAGGGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCCCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATTTGAAGACAAAGCAAATTCTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTGGATCTTCTCCTCCAATTGCTTGCGTGGTGCCCCCTTTTCCGCACTTGGTGTCTCCCTATCCGTCATGTTTAAGGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGCCAAGCCCCAAAAGTCTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATTGAGTTCATGTCATCGGTTTTATCATTGATGAGTTGAAAAGTATCTCTACTGATCATGTGCGGTCCTAATCTCTTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCGGGTCAGTTCAGCTAAACTTATGTATCGTTTGAACCTTTT                                                     ]


>consensus_10185#0 ATCCCCCGACGCCCCCGCATCGCCGCTTCACCCCGACACCCCGCGCGACCTAGTGCGCAA CGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAA ACAGGTGGCGGCGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCCC CATCCCTACGAGCAAACGCCGCCGGCACACGGGGACTGAGGGAGGCGGCTGCGGGCGAGC AAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGTAGCTGACGA CTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGAAACAGTCCACAA TGACAACTCCACTCCCTGTCAGTGCTGGTGATGCTTCACGAGTCCTCTTCACTGGCATTC GAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGCCACCCTGGTCCCTCTGCC AACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCACCTTCCTCTCTG CCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGACCGAACAATCT TTATTGACACTGCCCCCACACCCCGAGGCCCAATACGTGCACTGCTTCGCAATTCTGAAC CACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTCACCGGAAAGAGT CCTTCTATGACCAGCTACCCATGGTTGTCAGCTACAGTGGTGGCCTCATCCTGCTCACTG GCAATGAAAATAACTACTATGTCTGCAACCCATTCACTGGAGATACTTTCCTTCTACCAG TTCCGAAGCCCCAACTCCGCAATGCTGAAAGCTTGGGCATTGTTGCTCGGGATGGTGAGT ATGTGGTTGCTGAACTCATGATGTCCTGTCTACGTTCCTTCTCATCAGTAAATGGCCGTT GGGAGGAGAAGCCTCTCGTATGCCCTCAATTCTCCAGGGGTGACATGGTATTCTCCTCTG GTGGGATGCTTCATTGGGTTGATCTCAACTGTGGCATACTCTCCTGTGACCCATTTGCAT CAGAACCAACTGTACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGACCCACCCGTGGCC TGGATGAATGGATCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGTTGTGCTTCTTTG ACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACA GTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCT ATGATGATTATTCGCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGGTTGACCCATTGA ATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAA AGCAAATTCTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTGGATCTTCTCCTC CAATTGCTTGCGTGGTGCCCCCTTTACCGCACTTGGTGTCTCCCTATCCGTCATGTTTAA GGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGACAAGCCCCAAAAGT CTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATTGAGTTCATGTCA TCGGTTTTATCATTGATGAGTTGAAAAGTATCTCTACTGATCATGTGCGGTCCTAATCTC TTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCTTATCAGTTCAGCTAA ACTTATGTATCGTTTGAACCTTTTAGCGTCATATGTATCGTTTGAACACCTCTTTGTTGA ACGAAATGAAGACTAAA



consensusID : consensus_10185#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 712
fasta sequence
                              [ACCCCCTTAACGCGCGACCTAGTGCGCAACGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAAACAGGTGGCGGCGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCCCCATCCCTACGAGCAAACGCCGCCGGCACACGGGGACTGAGGGAGGCGGCTGCGGGCGAGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGTATCTGACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGAAACAGTCCACAATGACAACTCCACTCCCTGTCAGTGCTGGTGATGCTTCACGAGTCCTCTTCACTGGCATTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGCCACCCTGGTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCACCTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGACCGAACAATCTTTATTGACACTGCCCCCACACCCCGAGGCCCAATACGTGCACTGCTTCGCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTCACCGGAAAGAGTCCTTCTATGACCAGCTACCCATG]

[+] EMBL CB672351             [ACCCCCTTAACGCGCGACCTAGTGCGCAACGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAAACAGGTGGCGGCGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCCCCATCCCTACGAGCAAACGCCGCCGGCACACGGGGACTGAGGGAGGCGGCTGCGGGCGAGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGTATCTGACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGAAACAGTCCACAATGACAACTCCACTCCCTGTCAGTGCTGGTGATGCTTCACGAGTCCTCTTCACTGGCATTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGCCACCCTGGTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCACCTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGACCGAACAATCTTTATTGACACTGCCCCCACACCCCGAGGCCCAATACGTGCACTGCTTCGCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTCACCGGAAAGAGTCCTTCTATGACCAGCTACCCATG]


>consensus_10185#1 ACCCCCTTAACGCGCGACCTAGTGCGCAACGGAGGGGGAAGCGGTCGTCGTCGTCGTCAG CGGCGGCGGCTGCGGTGCACCGGCGGGAAACAGGTGGCGGCGCACCGGTTTCCCCTTTCT GTATCGCCCCCCCCTCCTTTCTCCTTCCCCATCCCTACGAGCAAACGCCGCCGGCACACG GGGACTGAGGGAGGCGGCTGCGGGCGAGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGG CACACGTCGTCGCGCAAGGTATCTGACGACTCCGCACGAAGACCCCAAGCGACAGCACAC GAATTGGTGTAAGCAGAAACAGTCCACAATGACAACTCCACTCCCTGTCAGTGCTGGTGA TGCTTCACGAGTCCTCTTCACTGGCATTCGAGACCACACTGACATCCTCATCGAGGTCCT CCTTCGGCTGCCACCCTGGTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGA GCGGACAACATCGTCCACCTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTC AAACTGGTTCCTCCTGGACCGAACAATCTTTATTGACACTGCCCCCACACCCCGAGGCCC AATACGTGCACTGCTTCGCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTC TCGCATGTGTTCCATTCACCGGAAAGAGTCCTTCTATGACCAGCTACCCATG



consensusID : consensus_10185#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence
                              [TACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGACCCACCCGTGGCCTGGATGAATGGATCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGATCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAAAGCAAATTCTTAATTGGACAGCACAGACTATTGCTGGGAGGGAGGGTGGAACTTCTCCTCCCATTGCTTGCGTGGGACCCCCCTTTACCCCACTTGGTGGCCTCCTTAATCGCTCCATGCTTGACCGAACTAAGCAAGCGTCAGTGATCCTCCTGGATGCAGGCACGCAAGGGCCAGCCCCCAAACGCTGGGCAAGGCCACCGGAACCCAACCCTTCCGGGTGATCACATGGATCTCTGACGCCGTGTCCCTCCGTTTTGTACTCTCCACAGCCTGT]

[+] EMBL CA756292             [TACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGACCCACCCGTGGCCTGGATGAATGGATCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGATCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAAAGCAAATTCTTAATTGGACAGCACAGACTATTGCTGGGAGGGAGGGTGGAACTTCTCCTCCCATTGCTTGCGTGGGACCCCCCTTTACCCCACTTGGTGGCCTCCTTAATCGCTCCATGCTTGACCGAACTAAGCAAGCGTCAGTGATCCTCCTGGATGCAGGCACGCAAGGGCCAGCCCCCAAACGCTGGGCAAGGCCACCGGAACCCAACCCTTCCGGGTGATCACATGGATCTCTGACGCCGTGTCCCTCCGTTTTGTACTCTCCACAGCCTGT]


>consensus_10185#2 TACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGACCCACCCGTGGCCTGGATGAATGGA TCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGG ATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCACTAGGTGGGAACAGTGGTGAGTGGG TGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGGAAGATGAAAGCTATGATGATTATT CGCTGGATGAGGATGAGGATCCATTAGTTGGCTTGGTTGACCCATTGAATGAGCACAGTG TGTACGTGATTTCTCAGGACTGCCTCTTCAACATCGATCTGAAGACAAAGCAAATTCTTA ATTGGACAGCACAGACTATTGCTGGGAGGGAGGGTGGAACTTCTCCTCCCATTGCTTGCG TGGGACCCCCCTTTACCCCACTTGGTGGCCTCCTTAATCGCTCCATGCTTGACCGAACTA AGCAAGCGTCAGTGATCCTCCTGGATGCAGGCACGCAAGGGCCAGCCCCCAAACGCTGGG CAAGGCCACCGGAACCCAACCCTTCCGGGTGATCACATGGATCTCTGACGCCGTGTCCCT CCGTTTTGTACTCTCCACAGCCTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10185#0      ATCCCCCGACGCCCCCGCATCGCCGCTTCACCCCGACACCCCGCGCGACCTAGTGCGCAA 60
consensus_10185#1      -----------------------------ACCCC--CTTAACGCGCGACCTAGTGCGCAA 29
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      CGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAA 120
consensus_10185#1      CGGAGGGGGAAGCGGTCGTCGTCGTCGTCAGCGGCGGCGGCTGCGGTGCACCGGCGGGAA 89
consensus_10185#2      -------------------------------------TACTTTTTATCAACCTGCCAGAG 23
                                                                *    *  *** **  ** 

consensus_10185#0      ACAGGTGGCGG-CGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCC 179
consensus_10185#1      ACAGGTGGCGG-CGCACCGGTTTCCCCTTTCTGTATCGCCCCCCCCTCCTTTCTCCTTCC 148
consensus_10185#2      GCCAGTGGAAGACCCACCCGTGGCCTGGATGAATGGATCCACATGAGGTATGTTGGTGTC 83
                        *  ****  * * **** **  **    *   *    ** *        *  *  *  *

consensus_10185#0      CCATCCCTACGAGCAAACGCCGCCGGCAC--ACGGGGACTGAGGGAGGCGGCTGCGGGCG 237
consensus_10185#1      CCATCCCTACGAGCAAACGCCGCCGGCAC--ACGGGGACTGAGGGAGGCGGCTGCGGGCG 206
consensus_10185#2      TCTGCTGGGCGGTTGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATG 143
                        *  *    **      *  *   * **   * * ***    **         *     *

consensus_10185#0      AGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGT--AGCT 295
consensus_10185#1      AGCAAGGAGACGCACCGGCGGCTGAGGGCGTCGGCACACGTCGTCGCGCAAGGT--ATCT 264
consensus_10185#2      AGCTTGTGGGCAC-TAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTT 202
                       ***  *  * * *   ** **     *  **  *     ** *     *** **  *  *

consensus_10185#0      GACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGA-AACAGT 354
consensus_10185#1      GACGACTCCGCACGAAGACCCCAAGCGACAGCACACGAATTGGTGTAAGCAGA-AACAGT 323
consensus_10185#2      CGAAGATCTGTGGGAAGATGA-AAGCTATGATG-ATTATTCGCTGGATGAGGATGAGGAT 260
                             ** *   *****    **** *      *  * * * ** * *  **  *   *

consensus_10185#0      CCACAATGACAACTCCACT--CCCTGTCAGTGCTGGTGATGCTT-CACGAGTCCTCTTCA 411
consensus_10185#1      CCACAATGACAACTCCACT--CCCTGTCAGTGCTGGTGATGCTT-CACGAGTCCTCTTCA 380
consensus_10185#2      CCATTA-GTTGGCTTGGTTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGA 319
                       ***  * *    **    *  ***  * * **       **  * *  ** * ***   *

consensus_10185#0      CTGGCA-TTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGC-CACCCTG 469
consensus_10185#1      CTGGCA-TTCGAGACCACACTGACATCCTCATCGAGGTCCTCCTTCGGCTGC-CACCCTG 438
consensus_10185#2      CTGCCTCTTCAACATCGATCTGA-AGACAAAGCAAATTCTTAATTGGACAGCACAGACTA 378
                       *** *  *** * * *   **** *  *  * * *  ** *  ** * * ** **  ** 

consensus_10185#0      GTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCAC 529
consensus_10185#1      GTCCCTCTGCCAACTACGCTGTGTATGCAAACTATGGCTAGAGCGGACAACATCGTCCAC 498
consensus_10185#2      TTGCTGGGAGGGAGGGTGGAACTTCTCCTC-CCATTGCTTGCGTGGG-ACCCCCCTTTAC 436
                        * *        *    *     * * *   * ** *** * * **  * *  * *  **

consensus_10185#0      CTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGA 589
consensus_10185#1      CTTCCTCTCTGCCTATGCTGAACGTCATACCACCAACCCTTCAAACTGGTTCCTCCTGGA 558
consensus_10185#2      CCCACTTGGTGGCCTCCTTAATCGCTCCATGCTTGACCGAACTAAGCAAG-CGTCAGTGA 495
                       *   **   ** *     * * **    *      ***   * **      * **   **

consensus_10185#0      CCGAACAATCTTTATTGACACTGCCCCCACACCCCGAG-GCCCAATACGTGCACTGCTTC 648
consensus_10185#1      CCGAACAATCTTTATTGACACTGCCCCCACACCCCGAG-GCCCAATACGTGCACTGCTTC 617
consensus_10185#2      TCCTCCTGGATGCAGGCACGCAAGGGCCAGCCCCCAAACGCTGGGCAAGGCCACCGGAAC 555
                        *   *    *  *   ** *     ***  **** *  **     * *  *** *   *

consensus_10185#0      GCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTC 708
consensus_10185#1      GCAATTCTGAACCACCAAAAGTCTCATCAATCATCACCTCCTCTCGCATGTGTTCCATTC 677
consensus_10185#2      CCAACCCT----TCCGGGTGATCACATGGATCTCTGACGCCGTGTCCCTCCGTTTTGTAC 611
                        ***  **      *      ** ***  ***     * **     * *  ***   * *

consensus_10185#0      ACCGGAAAGAGTCCTTCTATGACCAGCTACCCATGGTTGTCAGCTACAGTGGTGGCCTCA 768
consensus_10185#1      ACCGGAAAGAGTCCTTCTATGACCAGCTACCCATG------------------------- 712
consensus_10185#2      TCTCCACAGCCTGT---------------------------------------------- 625
                        *   * **  *                                                

consensus_10185#0      TCCTGCTCACTGGCAATGAAAATAACTACTATGTCTGCAACCCATTCACTGGAGATACTT 828
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      TCCTTCTACCAGTTCCGAAGCCCCAACTCCGCAATGCTGAAAGCTTGGGCATTGTTGCTC 888
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      GGGATGGTGAGTATGTGGTTGCTGAACTCATGATGTCCTGTCTACGTTCCTTCTCATCAG 948
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      TAAATGGCCGTTGGGAGGAGAAGCCTCTCGTATGCCCTCAATTCTCCAGGGGTGACATGG 1008
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      TATTCTCCTCTGGTGGGATGCTTCATTGGGTTGATCTCAACTGTGGCATACTCTCCTGTG 1068
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      ACCCATTTGCATCAGAACCAACTGTACTTTTTATCAACCTGCCAGAGGCCAGTGGAAGAC 1128
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      CCACCCGTGGCCTGGATGAATGGATCCACATGAGGTATGTTGGTGTCTCTGCTGGGCGGT 1188
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      TGTGCTTCTTTGACATTGATGAGGATGATGGAGAATCTGGGTCAATGAGCTTGTGGGCAC 1248
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      TAGGTGGGAACAGTGGTGAGTGGGTGTTGGAATACAAAGTGGATTTCGAAGATCTGTGGG 1308
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      AAGATGAAAGCTATGATGATTATTCGCTGGATGAGGATGAGGTTCCATTAGTTGGCTTGG 1368
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      TTGACCCATTGAATGAGCACAGTGTGTACGTGATTTCTCAGGACTGCCTCTTCAACATCG 1428
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      ATCTGAAGACAAAGCAAATTCTTAATTGTACAGCACAGACTAATGCTGGGAGGGAGGTTG 1488
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      GATCTTCTCCTCCAATTGCTTGCGTGGTGCCCCCTTTACCGCACTTGGTGTCTCCCTATC 1548
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      CGTCATGTTTAAGGAAAGAAGCAAGCAACAGTGATCCTCAGGAGGCAGGAAGCAGTGACA 1608
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      AGCCCCAAAAGTCTGGGAAGGGCAGGAGAAGGAAATCGAAGACGTGATAAAATGAAAATT 1668
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      GAGTTCATGTCATCGGTTTTATCATTGATGAGTTGAAAAGTATCTCTACTGATCATGTGC 1728
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      GGTCCTAATCTCTTTTAAATCTCATATGCAGTGTGTTGCAGCTCTGTTGCATTTCCTTAT 1788
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      CAGTTCAGCTAAACTTATGTATCGTTTGAACCTTTTAGCGTCATATGTATCGTTTGAACA 1848
consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
                                                                                   

consensus_10185#0      CCTCTTTGTTGAACGAAATGAAGACTAAA 1877
consensus_10185#1      -----------------------------
consensus_10185#2      -----------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)