These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10187#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1858 fasta sequence [AACTCACTGCCAATCTCTTCATCCAGCTCACTGCATAATCACACACTAATTAACAAGCTAATTAGCTGCAGTAATTAGCTGCATTGAATTCATGGAGAGGGGTCAGAAGAAGAAGCTGGCGACGTTGGTCGGGTGCAACTACGCCGGCACGCCCAACGAGCTGCAGGGCTGCATCAACGACGTCGCCGCGATGCGCGACGCCCTCGTCGCCCGCTTCGGCTTCGCGCCGGCCGACGTCACCGTGCTCACCGACGACCGCGGCTCGCCGGTGCTCCCCACCGGCGCCAACATCAAGCGCGCGCTGGCCGACATGGTCGCCCGCGCGGCGCCCGGCGACGTTCTCTTCTTCCACTACAGCGGCCACGGCACGCTCGTCCCGCCGGTGAAGGGGCGCCGCCACGGCCACGGCGAGTGCGACGAGGCCATCGTGCCCTGCGACTTCAACCTCATCACCGACGTCGACTTCCGCCGGCTCGTGGACCGCGTGCCGCGCGGCGCGAGCTTCACCATGGTGTCCGACTCGTGCCACAGCGGCGGGCTCATCGACCTCGAGAAGGAGCAGATCGGCCCCTCCGTCCTCGCCGCCGGCGCCGCACCGGCCGCTGCTGCTGCTTCCACGACGGCCACGCGCGCCACCGCCGCGCGGTTCCTGCCGTACGCCGCCGTTGTCGAACACCTCTCCGGCGTCTCGGGCGTCGACGCCGCCCACCACGTCGCCGACCACCTCCTCGCGCTCTTCGGCGCGGACGCCAGCGCCAAGTTCCACCGCGACGCCGAACAGCCGGTGCGCACCGACGACGACGGCATCCTGCTGAGCGGGTGCCAGACGGACGAGACGTCGGCGGACGTGCCGGGGGACGACGAGGTGGCGGCGGG-CGGCAAGGCGTGCGGCGCGTTCAGCAACGCGATACAGACCGTGCTGGCGTCGCACCCGGCGCCGGTGAGCAACCGGCAGCTGGTGAGCATGGCCAGGGCGGTGCTGAGCGATCAGGGGTTCGAGCAGCACCCGTGCCTCTACTGCAGCGACGGCAACGCCGAGACGCCATTCCTGTGGCAAGAGGAGGACAAGAAGAAGACGGTTACCGCGGCGGCGGAGCAGGCCATGACGGCGCTCTGAATGTGTTCGACAGAGGAAGATTGATTGGTCAATACCGATCATTGGGAAAAAAATAAGATTATAATTTTAATCGTCTTATTCAATGCCACAACAAGTTACCATTGC-AAATTTGTATGCCATCATGCTGAAGGAACATGTTTATTGATTTTTACAATGATGAATATATCATCAGTTCAGTATTGTTACAAAAAAAACCACACACTTTACTGCCTATGGTGCGACACTATGGATGGTTCGGACGAGGGCGGGGGATAATCCTCGGTAGTGAATTGTTCATTGGACAGTGTTACACCAGGGTGGTTTGGACGGGGACGAGGATAGTCCCCGGTAGTGAATTCTTCATTAGATAGTGCTATACTAGGATGGTTTGGGCGCGGACGGGGATAATCCTCGGTAGTGAGCTCCTCGTCGGGGTTTATATGTGCCTTTGCCCTAACATGGATTTTCTCCATTTTGCTTGCAGTCAAGCTTTGATGCTTTGGGGTGAGATCAACATTGTTGTCCGCAGTAGTGGAATCTTCTCTTGATGCTAATTCACCGAGTTCCGTCAAAATTCTTGGTATAGCATGCTTGTAAAGATTCTTTCTTGAGTTCACAAATCCATGATTTATCCCTGATTGAAATTCATAATTCTGACCAGCAACCAAACGATAGGAAATTTGTAGTATGACTAAAAAGAAAACGAAGTAGCTCAAGATTGTCTTCATATTCCTGCCTTCTTTGTATACAAACTTGTCTTTG] [+] EMBL AK064966 [AACTCACTGCCAATCTCTTCATCCAGCTCACTGCATAATCACACACTAATTAACAAGCTAATTAGCTGCAGTAATTAGCTGCATTGAATTCATGGAGAGGGGTCAGAAGAAGAAGCTGGCGACGTTGGTCGGGTGCAACTACGCCGGCACGCCCAACGAGCTGCAGGGCTGCATCAACGACGTCGCCGCGATGCGCGACGCCCTCGTCGCCCGCTTCGGCTTCGCGCCGGCCGACGTCACCGTGCTCACCGACGACCGCGGCTCGCCGGTGCTCCCCACCGGCGCCAACATCAAGCGCGCGCTGGCCGACATGGTCGCCCGCGCGGCGCCCGGCGACGTTCTCTTCTTCCACTACAGCGGCCACGGCACGCTCGTCCCGCCGGTGAAGGGGCGCCGCCACGGCCACGGCGAGTGCGACGAGGCCATCGTGCCCTGCGACTTCAACCTCATCACCGACGTCGACTTCCGCCGGCTCGTGGACCGCGTGCCGCGCGGCGCGAGCTTCACCATGGTGTCCGACTCGTGCCACAGCGGCGGGCTCATCGACCTCGAGAAGGAGCAGATCGGCCCCTCCGTCCTCGCCGCCGGCGCCGCACCGGCCGCTGCTGCTGCTTCCACGACGGCCACGCGCGCCACCGCCGCGCGGTTCCTGCCGTACGCCGCCGTTGTCGAACACCTCTCCGGCGTCTCGGGCGTCGACGCCGCCCACCACGTCGCCGACCACCTCCTCGCGCTCTTCGGCGCGGACGCCAGCGCCAAGTTCCACCGCGACGCCGAACAGCCGGTGCGCACCGACGACGACGGCATCCTGCTGAGCGGGTGCCAGACGGACGAGACGTCGGCGGACGTGCCGGGGGACGACGAGGTGGCGGCGGG CGGCAAGGCGTGCGGCGCGTTCAGCAACGCGATACAGACCGTGCTGGCGTCGCACCCGGCGCCGGTGAGCAACCGGCAGCTGGTGAGCATGGCCAGGGCGGTGCTGAGCGATCAGGGGTTCGAGCAGCACCCGTGCCTCTACTGCAGCGACGGCAACGCCGAGACGCCATTCCTGTGGCAAGAGGAGGACAAGAAGAAGACGGTTACCGCGGCGGCGGAGCAGGCCATGACGGCGCTCTGAATGTGTTCGACAGAGGAAGATTGATTGGTCAATACCGATCATTGGGAAAAAAATAAGATTATAATTTTAATCGTCTTATTCAATGCCACAACAAGTTACCATTGC AAATTTGTATGCCATCATGCTGAAGGAACATGTTTATTGATTTTTACAATGATGAATATATCATCAGTTCAG ] [+] EMBL AK104210 [ TCACTGCCAATCTCTTCATCCAGCTCACTGCATAATCACACACTAATTAACAAGCTAATTAGCTGCAGTAATTAGCTGCATTGAATTCATGGAGAGGGGTCAGAAGAAGAAGCTGGCGACGTTGGTCGGGTGCAACTACGCCGGCACGCCCAACGAGCTGCAGGGCTGCATCAACGACGTCGCCGCGATGCGCGACGCCCTCGTCGCCCGCTTCGGCTTCGCGCCGGCCGACGTCACCGTGCTCACCGACGACCGCGGCTCGCCGGTGCTCCCCACCGGCGCCAACATCAAGCGCGCGCTGGCCGACATGGTCGCCCGCGCGGCGCCCGGCGACGTTCTCTTCTTCCACTACAGCGGCCACGGCACGCTCGTCCCGCCGGTGAAGGGGCGCCGCCACGGCCACGGCGAGTGCGACGAGGCCATCGTGCCCTGCGACTTCAACCTCATCACCGACGTCGACTTCCGCCGGCTCGTGGACCGCGTGCCGCGCGGCGCGAGCTTCACCATGGTGTCCGACTCGTGCCACAGCGGCGGGCTCATCGACCTCGAGAAGGAGCAGATCGGCCCCTCCGTCCTCGCCGCCGGCGCCGCACCGGCCGCTGCTGCTGCTTCCACGACGGCCACGCGCGCCACCGCCGCGCGGTTCCTGCCGTACGCCGCCGTTGTCGAACACCTCTCCGGCGTCTCGGGCGTCGACGCCGCCCACCACGTCGCCGACCACCTCCTCGCGCTCTTCGGCGCGGACGCCAGCGCCAAGTTCCACCGCGACGCCGAACAGCCGGTGCGCACCGACGACGACGGCATCCTGCTGAGCGGGTGCCAGACGGACGAGACGTCGGCGGACGTGCCGGGGGACGACGAGGTGGCGGCGGG CGGCAAGGCGTGCGGCGCGTTCAGCAACGCGATACAGACCGTGCTGGCGTCGCACCTGGCGCCGGTGAGCAACCGGCAGCTGGTGAGCATGGCCAGGGCGGTGCTGAGCGATCAGGGGTTCGAGCAGCACCCGTGCCTCTACTGCAGCGACGGCAACGCCGAGACGCCATTCCTGTGGCAAGAGGAGGACAAGAAGAAGACGGTTACCGCGGCGGCGGAGCAGGCCATGACGGCGCTCTGAATGTGTTCGACAGAGGAAGATTGATTGGTCAATACCGATCATTGGG AAAAAATAAGATTATAATTTTAATCGTCTTATTCAATGCCACAACAAGTTACCATTGC AAATTTGTATGCCATCATGCTGAAGGAACATGTTTATTGATTTTTACAATGATGAATATATCATCAGTTCA ] [+] EMBL AK104380 [ TCACTGCCAATCTCTTCATCCAGCTCACTGCATAATCACACACTAATTAACAAGCTAATTAGCTGCAGTAATTAGCTGCATTGAATTCATGGAGAGGGGTCAGAAGAAGAAGCTGGCGACGTTGGTCGGGTGCAACTACGCCGGCACGCCCAACGAGCTGCAGGGCTGCATCAACGACGTCGCCGCGATGCGCGACGCCCTCGTCGCCCGCTTCGGCTTCGCGCCGGCCGACGTCACCGTGCTCACCGACGACCGCGGCTCGCCGGTGCTCCCCACCGGCGCCAACATCAAGCGCGCGCTGGCCGACATGGTCGCCCGCGCGGCGCCCGGCGACGTTCTCTTCTTCCACTACAGCGGCCACGGCACGCTCGTCCCGCCGGTGAAGGGGCGCCGCCACGGCCACGGCGAGTGCGACGAGGCCATCGTGCCCTGCGACTTCAACCTCATCACCGACGTCGACTTCCGCCGGCTCGTGGACCGCGTGCCGCGCGGCGCGAGCTTCACCATGGTGTCCGACTCGTGCCACAGCGGCGGGCTCATCGACCTCGAGAAGGAGCAGATCGGCCCCTCCGTCCTCGCCGCCGGCGCCGCACCGGCCGCTGCTGCTGCTTCCACGACGGCCACGCGCGCCACCGCCGCGCGGTTCCTGCCGTACGCCGCCGTTGTCGAACACCTCTCCGGCGTCTCGGGCGTCGACGCCGCCCACCACGTCGCCGACCACCTCCTCGCGCTCTTCGGCGCGGACGCCAGCGCCAAGTTCCACCGCGACGCCGAACAGCCGGTGCGCACCGACGACGACGGCATCCTGCTGAGCGGGTGCCAGACGGACGAGACGTCGGCGGACGTGCCGGGGGACGACGAGGTGGCGGCGGG CGGCAAGGCGTGCGGCGCGTTCAGCAACGCGATACAGACCGTGCTGGCGTCGCACCTGGCGCCGGTGAGCAACCGGCAGCTGGTGAGCATGGCCAGGGCGGTGCTGAGCGATCAGGGGTTCGAGCAGCACCCGTGCCTCTACTGCAGCGACGGCAACGCCGAGACGCCATTCCTGTGGCAAGAGGAGGACAAGAAGAAGACGGTTACCGCGGCGGCGGAGCAGGCCATGACGGCGCTCTGAATGTGTTCGACAGAGGAAGATTGATTGGTCAATACCGATCATTGGG AAAAAATAAGATTATAATTTTAATCGTCTTATTCAATGCCACAACAAGTTACCATTGC AAATTTGTATGCCATCATGCTGAAGGAACATGTTTATTGATTTTTACAATGATGAATATATCATCAGTTCA ] [+] EMBL OSS3618A [ CATAATCACACACTAATTAACAAGCTAATTAGCTGCAGTAATTAGCTGCATTGAATTCATGGAGAGGGGTCAGAAGAAGAAGCTGGCGACGTTGGTCGGGTGCAACTACGCCGGCACGCCCAACGAGCTGCAGGGCTGCATCAACGACGTCGCCGCGATGCGCGACGCCCTCGTNG CCGCTTCGGCTTCGCGCCGGCCGACGTCACCGTGCTCACCGACGACCGCGGCTCGCCGGTGCTCCCCACCGGCGCCAACATCAAGCGNGCGCTGGCCGACATGGTCGACCGCGCGGCGCCCGGCNACGTTTTCTTCTTCCACTACAGCGG ] [-] EMBL CB646311 [ GCCGTTGTCGAACACCTCTCCGGCGTCTCGGGCGTTGACGCCGCCCACCACGTCGCCGACCACCTCCTCGCGTTTTTCGGCGCGGACGCCAGCGCCAAGTTCCACCGCGACGCCGAACAGCCGGTGCGCACCGACGACGACGGCATCCTGCTGAGCGGGTGCCAGACGGACGAGACGTCGGCGGACGTGCCGGGGGACGACGAGGTGGCGGCGGG CGGCAAGGCGTGCGGCGCGTTCAGCAACGCGATACAGACCGTGCTGGCGTCGCACCCGGCGCCGGTGAGCAACCGGCAGCTGGTGAGCATGGCCAGGGCGGTGCTGAGCGATCAGGGGTTCGAGCAGCACCCGTGCCTTTACTGCAGCGACGGCAACGCCGAGACGCCATTCCTGTGGCAAGAGGAGGACAAGAAGAAGACGGTTACCGCGGCGGCGGAGCAGGCCATGACGGCGCTTTGAATGTGTTCGACAGAGGAAGATTGATTGGTCAATACCGATCATTGGGAAAAAAATAAGATTATAATTTTAATCGTCTTATTCAATGCCACAACAAGTTACCATTGC AAATTTGTATGCCATCATGCTGAAGGAACATGTTTATTGATTTTTACAATGATGGAGATATCATCAGTTCAG ] [+] EMBL AU108391 [ gccngcCGGGCCGGCAAGGCGTGCGGCGCGTTCAGCAACGCGATACAGACCGTGCTGGCGTCGCACCCGGCGCCGGTGAGCAACCGGCAGCTGGTGAGCATGGCCAGGGCGGTGCTGAGCGATCNGGGNTTCGAGCAGCACCCGTGCCTCTACTGCAGCGACGGCAACGCCGAGACGCCATTCCTGTGGCAAGAGGAGGACAAGAAGAAGACGGTTACCGCGGCGGCGGAGCAGGCCATGACGGCGCTCTGAATGTGTTCGACAGAGGAAGATTGATTGGTCAATACCGATCATTGGGAAAAAAATAAGATTATAATTTTAATCGTCTTATTCAATGCCACAACAAGTTACCATTGC AAATTTGTATGCCATCATGCTGAAGGAACATGTTTATTGNTTTTTACAATGATGAATATATCATCAGTTCAGTATTGTTACAAAAAAAA ] [-] EMBL CA766526 [ TGCAAAATTTGTAAGCCATCATGCTGAAGGAACATGTTTATTGATTTTTACAATGATGAATATATCATCAGTTCAGTATTGTTACAAATGTAACCACACACTTTACTGCCTATGGTGCGACACTATGGATGGTTCGGACGAGGGCGGGGGATAATCCTCGGTAGTGAATTGTTCATTGGACAGTGTTACACCAGGGTGGTTTGGACGGGGACGAGGATAGTCCCCGGTAGTGAATTCTTCATTAGATAGTGCTATACTAGGATGGTTTGGGCGCGGACGGGGATAATCCTCGGTAGTGAGCTCCTCGTCGGGGTTTATATGTGCCTTTGCCCTAACATGGATTTTCTCCATTTTGCTTGCAGTCAAGCTTTGATGCTTTGGGGTGAGATCAACATTGTTGTCCGCAGTAGTGGAATCTTCTCTTGATGCTAATTCACCGAGTTCCGTCAAAATTCTTGGTATAGCATGCTTGTAAAGATTCTTTCTTGAGTTCACAAATCCATGATTTATCCCTGATTGAAATTCATAATTCTGACCAGCAACCAAACGATAGGAAATTTGTAGTATGACTAAAAAGAAAACGAAGTAGCTCAAGATTGTCTTCATATTCCTGCCTTCTTTGTATACAAACTTGTCTTTG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||