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Oryza sativa
cluster # 10202 cluster # 10202       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10202#0 length = 1129 sequences # 4  
consensus_10202#1 length = 807 sequences # 1  
consensus_10202#2 length = 696 sequences # 1  
consensus_10202#3 length = 118 sequences # 1  

consensusID : consensus_10202#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1129
fasta sequence
                              [GAGGGGAGTAGACAGACGGGGACAGATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAG-TTCAAAATACCAGAAACAACCACCTGGT-GGAAGAGAAAATTTTTTATATTTCTT-CGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGCAAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGCTACCAGGAACGCTTAACGCGGAGCGCATCGATAGAGACATTCGGGCAGGCCAATTTTGAGCCCGAAATCTGATTTACTGGGACGATGGGCTTAATGGGATTTGTACAGAAGGATAGTGACTCTTCTTTGGTTCTGATCCTTTGTACCTGGAAAGACTTTTGAAAGAGGCCCTTAGCAGTGTGAATTTACATGTGTACTTCACAGATGGCCAGCATTAAGGTTGAATGGTTGAGATGCAATATGAGTGAGGTTTGAAAGGAGGGATGCACACATACATTTACTAATAGATCAGATAAATCAAACCGAGTCAATAGAAGCGCACGTATGTATGTCATGTAGGAGTATAGGTGAGATTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAATATCAGATATTCAGATCCCGCTGTATGTACATTTGCCTTGCATGATAAATCTGCAGCAATCAAAAA]

[+] EMBL AK121232             [GAGGGGAGTAGACAGACGGGGACAGATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAG TTCAAAATACCAGAAACAACCACCTGGT GGAAGAGAAAATTTTTTATATTTCTT CGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGCAAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGCTACCAGGAACGCTTAACGCGGAGCGCATCGATAGAGACATTCGGGCAGGCCAATTTTGAGCCCGAAATCTGATTTACTGGGACGATGGGCTTAATGGGATTTGTACAGAAGGATAGTGACTCTTCTTTGGTTCTGATCCTTTGTACCTGGAAAGACTTTTGAAAGAGGCCCTTAGCAGTGTGAATTTACATGTGTACTTCACAGATGGCCAGCATTAAGGTTGAATGGTTGAGATGCAATATGAGTGAGGTTTGAAAGGAGGGATGCACACATACATTTACTAATAGATCAGATAAATCAAACCGAGTCAATAGAAGCGCACGTATGTATGTCATGTAGGAGTATAGGTGAGATTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAATATCAGAT                                                          ]
[+] EMBL C98952               [                       AGATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTTCAAAATACCAGAAACAACCACCTGGTGGGAAGAG AAATTTTTTATATTTCTTCCGAGACAATTTGAGATTA CTGATATCTTGTTGATGGTGCTATTTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB656942             [                                                                                                                                                                                                                                                                                                                                    ATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAG TTCAAAATACCAGAAACAACCACCTGGT GGAAGAGAAAATTTTTTATATTTCTT CGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGCAAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGCTACCAGGAACGCTTAACGCGGAGCGCATCGATAGAGACATTCGGGCAGGCCAATTTTGAGCCCGAAATCTGATTTACTGGGACGATGGGCTTAATGGGATTTGTACAGAAGGATAGTGACTCTTCTTTGGTTCTGATCCTTTGTACCTGGAAAGACTTTTGAAAGAGGCCCTTAGCAGTGTGAATTTACATGTGTACTTCACAGATGGCCAGCATTAAGGTTGAATGGTTGAGATGCAATATGAGTGAGGTTTGAAAGGAGGGATGCACACATACATTTACTAATAGATCAGATAAATCAAACCGAGTCAATAGAAGCGCACGTATGTATGTCATGTAGGAGTATAGGTGAGATTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAATATCAGATATTCAGA                                                   ]
[+] EMBL C98953               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cgntgGAATTTACATGTGTACTTCNCCGATGGCCAGCATTAAGGTTGAATGGTTGAGATGCAATATGAGTGAGGTTTGAAAGGAGGGATGCACACATACATTTACTAATAGATCAGATAAATCAAACCGAGTCAATAGAAGCGCACGTATGTATGTCATGTAGGAGTATAGGTGAGATTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAATATCAGATATTCAGATCCCGCTGTATGTACATTTGCCTTGCATGATAAATCTGCAGCAATCAAAAA]


>consensus_10202#0 GAGGGGAGTAGACAGACGGGGACAGATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCG ACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCC TTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGAC ATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACG ACGCCCATGTCAACCTCCGCCACGGGGATAGTCTTATAGTGGCCGTGGCACCTAAGCCAC CTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGA AGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGAG ACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCAT GGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGAC CTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGC AAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGCTACCAGGAACGC TTAACGCGGAGCGCATCGATAGAGACATTCGGGCAGGCCAATTTTGAGCCCGAAATCTGA TTTACTGGGACGATGGGCTTAATGGGATTTGTACAGAAGGATAGTGACTCTTCTTTGGTT CTGATCCTTTGTACCTGGAAAGACTTTTGAAAGAGGCCCTTAGCAGTGTGAATTTACATG TGTACTTCACAGATGGCCAGCATTAAGGTTGAATGGTTGAGATGCAATATGAGTGAGGTT TGAAAGGAGGGATGCACACATACATTTACTAATAGATCAGATAAATCAAACCGAGTCAAT AGAAGCGCACGTATGTATGTCATGTAGGAGTATAGGTGAGATTTCAATCTACATCAGGAA TTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAATATCAGATATTCAGATC CCGCTGTATGTACATTTGCCTTGCATGATAAATCTGCAGCAATCAAAAA



consensusID : consensus_10202#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 807
fasta sequence
                              [ATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGGTATAGTATACTAGTATTCTTTTTCTTTCTCTTCACATACATCTTATGTGGAAGACAGGACTATTCTAGGATGGATGGTTAATTCGTTGTCTCTTCAAGACCCTACTTTTTTTCTTCTTCTTCTGCACTTGATACATCTTGTGGAATACAGTTAAATACTTCCTTCCTTCTGCAATTTCTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGNCAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGC]

[+] EMBL CB656941             [ATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGGTATAGTATACTAGTATTCTTTTTCTTTCTCTTCACATACATCTTATGTGGAAGACAGGACTATTCTAGGATGGATGGTTAATTCGTTGTCTCTTCAAGACCCTACTTTTTTTCTTCTTCTTCTGCACTTGATACATCTTGTGGAATACAGTTAAATACTTCCTTCCTTCTGCAATTTCTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGNCAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGC]


>consensus_10202#1 ATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGAC GCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGT TGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCT GGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGG GGGTATAGTATACTAGTATTCTTTTTCTTTCTCTTCACATACATCTTATGTGGAAGACAG GACTATTCTAGGATGGATGGTTAATTCGTTGTCTCTTCAAGACCCTACTTTTTTTCTTCT TCTTCTGCACTTGATACATCTTGTGGAATACAGTTAAATACTTCCTTCCTTCTGCAATTT CTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACG GTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTCAAAATACCAGAAACAA CCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGAGACAAATTGAGATTACCTGATA TCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGT TCCTTTTTGCACCTATTGCTCAAATGTACGACGTTGGACCTTTATTTATACTTGGTACAG GCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGACAGNCAGGTGATGTCAGTGCATACT CCATATTTAATGAAGACTTCCGGGAGC



consensusID : consensus_10202#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 696
fasta sequence
                              [ATCACCCCTTGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGGTATAGTATACTAGTATTCTTTTTCTTTCTCTTCACATACATCTTATGTGGAAGACAGGACTATTCTAGGATGGATGGTTAATTCGTTGTCTCTTCAAGACCCTACTTTTTTTCTTCTTCTTCTGCACTTGATACATCTTGTGGAATACAGTTAAATACTTCCTTCCTTCTGCAATTTCTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGACACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTG]

[+] EMBL CB656940             [ATCACCCCTTGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGGGGGTATAGTATACTAGTATTCTTTTTCTTTCTCTTCACATACATCTTATGTGGAAGACAGGACTATTCTAGGATGGATGGTTAATTCGTTGTCTCTTCAAGACCCTACTTTTTTTCTTCTTCTTCTGCACTTGATACATCTTGTGGAATACAGTTAAATACTTCCTTCCTTCTGCAATTTCTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGACACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTTG]


>consensus_10202#2 ATCACCCCTTGGCATGGCCATGGCTGCCGCCGGCGACGAGGCGGAGATGGTCGAGGTGAC GCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCCTTCGCCTCCCTCCGTTTATCTCGGT TGCCGATCTGCGCCGCCACATCGCTCACGACCGACATCTCCCACAAGACCGCCTCCGCCT GGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACGACGCCCATGTCAACCTCCGCCACGG GGGTATAGTATACTAGTATTCTTTTTCTTTCTCTTCACATACATCTTATGTGGAAGACAG GACTATTCTAGGATGGATGGTTAATTCGTTGTCTCTTCAAGACCCTACTTTTTTTCTTCT TCTTCTGCACTTGATACATCTTGTGGAATACAGTTAAATACTTCCTTCCTTCTGCAATTT CTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAGCCACCTGCTAATCATCTCCGTGACG GTGATGGTGACGATGACGATGATGAAGAGGAAGAGCTGAAGTTCAAAATACCAGAAACAA CCACCTGGTGGAAGAGAAAATTTTTTATATTTCTTCGACACAAATTGAGATTACCTGATA TCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAAGCATGGGTTCTTATCGCTATGTGGT TCCTTTTTGCACCTATTGCTCAAATGTACGACGTTG



consensusID : consensus_10202#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 118
fasta sequence
                              [TTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAA]

[+] EMBL CF321278             [TTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAA]


>consensus_10202#3 TTTCAATCTACATCAGGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10202#1      -------------------------ATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCG 35
consensus_10202#2      -------------------------ATCACCCCTTGGCATGGCCATGGCTGCCGCCGGCG 35
consensus_10202#0      GAGGGGAGTAGACAGACGGGGACAGATCAGAGTCAGGCATGGCCATGGCTGCCGCCGGCG 60
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCC 95
consensus_10202#2      ACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCC 95
consensus_10202#0      ACGAGGCGGAGATGGTCGAGGTGACGCTGCGCGCCGTCGGCCCGTCCCGTCCCACCACCC 120
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      TTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGAC 155
consensus_10202#2      TTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGAC 155
consensus_10202#0      TTCGCCTCCCTCCGTTTATCTCGGTTGCCGATCTGCGCCGCCACATCGCTCACGACCGAC 180
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACG 215
consensus_10202#2      ATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACG 215
consensus_10202#0      ATCTCCCACAAGACCGCCTCCGCCTGGTCCTGCGAGGAAGGAATCTCCCGTGCCAAGACG 240
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ACGCCCATGTCAACCTCCGCCACGGGGGTATAGTATACTAGTATTCTTTTTCTTTCTCTT 275
consensus_10202#2      ACGCCCATGTCAACCTCCGCCACGGGGGTATAGTATACTAGTATTCTTTTTCTTTCTCTT 275
consensus_10202#0      ACGCCCATGTCAACCTCCGCCACGGGG--------------------------------- 267
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      CACATACATCTTATGTGGAAGACAGGACTATTCTAGGATGGATGGTTAATTCGTTGTCTC 335
consensus_10202#2      CACATACATCTTATGTGGAAGACAGGACTATTCTAGGATGGATGGTTAATTCGTTGTCTC 335
consensus_10202#0      ------------------------------------------------------------
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      TTCAAGACCCTACTTTTTTTCTTCTTCTTCTGCACTTGATACATCTTGTGGAATACAGTT 395
consensus_10202#2      TTCAAGACCCTACTTTTTTTCTTCTTCTTCTGCACTTGATACATCTTGTGGAATACAGTT 395
consensus_10202#0      ------------------------------------------------------------
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      AAATACTTCCTTCCTTCTGCAATTTCTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAG 455
consensus_10202#2      AAATACTTCCTTCCTTCTGCAATTTCTTTAGATAGTCTTATAGTGGCCGTGGCACCTAAG 455
consensus_10202#0      -------------------------------ATAGTCTTATAGTGGCCGTGGCACCTAAG 296
consensus_10202#3      --------------------------------------------TTTCAATCTACATCAG 16
                                                                      *     ** * **

consensus_10202#1      CCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAG 515
consensus_10202#2      CCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAG 515
consensus_10202#0      CCACCTGCTAATCATCTCCGTGACGGTGATGGTGACGATGACGATGATGAAGAGGAAGAG 356
consensus_10202#3      GAATTCATGAAGTAAATGTATATTACCCATCATG-CGTTAACATAAAAAAAAAAAAAAAA 75
                         *      **  *  *   *       **  ** ** * **    *  ** *  ** * 

consensus_10202#1      CTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTT 575
consensus_10202#2      CTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTT 575
consensus_10202#0      CTGAAGTTCAAAATACCAGAAACAACCACCTGGTGGAAGAGAAAATTTTTTATATTTCTT 416
consensus_10202#3      --AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAA--------------- 118
                          **    **** *  * *** **  *   *    ** ******               

consensus_10202#1      CGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAA 635
consensus_10202#2      CGACACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAA 635
consensus_10202#0      CGAGACAAATTGAGATTACCTGATATCTTGTTGATGGTGCTATTTTCTCTGGGTATCAAA 476
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      GCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTT 695
consensus_10202#2      GCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTT 695
consensus_10202#0      GCATGGGTTCTTATCGCTATGTGGTTCCTTTTTGCACCTATTGCTCAAATGTACGACGTT 536
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      GGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGA 755
consensus_10202#2      G----------------------------------------------------------- 696
consensus_10202#0      GGACCTTTATTTATACTTGGTACAGGCTTCTTGGTCATTCTTTGTAATCTTGGAAGACGA 596
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      CAGNCAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGC-------- 807
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      CAGCAAGGTGATGTCAGTGCATACTCCATATTTAATGAAGACTTCCGGGAGCTACCAGGA 656
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      ACGCTTAACGCGGAGCGCATCGATAGAGACATTCGGGCAGGCCAATTTTGAGCCCGAAAT 716
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      CTGATTTACTGGGACGATGGGCTTAATGGGATTTGTACAGAAGGATAGTGACTCTTCTTT 776
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      GGTTCTGATCCTTTGTACCTGGAAAGACTTTTGAAAGAGGCCCTTAGCAGTGTGAATTTA 836
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      CATGTGTACTTCACAGATGGCCAGCATTAAGGTTGAATGGTTGAGATGCAATATGAGTGA 896
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      GGTTTGAAAGGAGGGATGCACACATACATTTACTAATAGATCAGATAAATCAAACCGAGT 956
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      CAATAGAAGCGCACGTATGTATGTCATGTAGGAGTATAGGTGAGATTTCAATCTACATCA 1016
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      ------------------------------------------------------------
consensus_10202#2      ------------------------------------------------------------
consensus_10202#0      GGAATTCATGAAGTAAATGTATATTACCCATCATGCGTTAACATAAATATCAGATATTCA 1076
consensus_10202#3      ------------------------------------------------------------
                                                                                   

consensus_10202#1      -----------------------------------------------------
consensus_10202#2      -----------------------------------------------------
consensus_10202#0      GATCCCGCTGTATGTACATTTGCCTTGCATGATAAATCTGCAGCAATCAAAAA 1129
consensus_10202#3      -----------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)