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Oryza sativa
cluster # 10217 cluster # 10217       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10217#0 length = 1240 sequences # 3  
consensus_10217#1 length = 751 sequences # 3  
consensus_10217#2 length = 737 sequences # 1  

consensusID : consensus_10217#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1240
fasta sequence
                              [GCCACTCGCCGCCGCCTCCTGCCCCTCGCGCCCCCCGGTCGCGCCCACCTCTCCGCCGCGGCCGCGTCCACCTCCCCCAAAAAACCCTAGCCGCCGCCACCTCTCATCCCACCCTCTCCCTCTCCCGCTGCGTCTGCCTCCCCCTCGCGCCGCCGTCGTCGCCTCCGCCTTCCCCTCGCGCCCGCGCCTCCGCCTTGCAACGTAGCCATCGTCGTCTCCGTCGGCTCGCGCTGCCGCCTCCACCTCCCCCGCCGGTGCCGCCGCCGTCGTCGCGTTGTCGTCTCCGAGCGCCTCCGCCTCCCGCCTCGCGCCGCCGCCGAGCGCAGCCATCCCCGTCTCCGCCACTGCCGTCGGCATCATCGAGCGCCCCCGACTATCGGCCGAGACGGCTAGCTCGGGGAGGGGATGGCTATGGCGCGTCCGTCGACATCGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGTATCTGCAAGGAATTGGTGAGAGGACGGTCATCGCTAGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTGGCGGCAGCATCACGAATATGTTGCTGAGTGTCTCCGTAGAAGATGGCAAGGGCAACAAGTCTTCTGTGACTGTTCGTTTGTATGGCCCAAATACAGCCTTGGTGATTGATCGGAAGAAGGAAATGCAGGCTATACCACATCTCTCAGCTCCAGGGTTTGGGGTCAGCTACTTGGAACATTTGAAAATGGAATGGTCCAGTCATTCATCTATGCACGTACATTAACTCCTTCAGCAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAATGCACCGCGGAGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACATATACCCCTACAGTAATCATGGGAAAGCTATTATCTGACAACGGGAGTCAAGAGTTCGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGTTATGTCCATATTGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCAATGCTTTAGGCTTTTCCATGCTGCTGTAATGTAAAATCATTAGGAAATTCCCGAAGTACACATCGCTTACAATGATTGACAGACTTAGTGTTGTTTTAAATTGAACGCTTGTT]

[+] EMBL CB630215             [GCCACTCGCCGCCGCCTCCTGCCCCTCGCGCCCCCCGGTCGCGCCCACCTCTCCGCCGCGGCCGCGTCCACCTCCCCCAAAAAACCCTAGCCGCCGCCACCTCTCATCCCACCCTCTCCCTCTCCCGCTGCGTCTGCCTCCCCCTCGCGCCGCCGTCGTCGCCTCCGCCTTCCCCTCGCGCCCGCGCCTCCGCCTTGCAACGTAGCCATCGTCGTCTCCGTCGGCTCGCGCTGCCGCCTCCACCTCCCCCGCCGGTGCCGCCGCCGTCGTCGCGTTGTCGTCTCCGAGCGCCTCCGCCTCCCGCCTCGCGCCGCCGCCGAGCGCAGCCATCCCCGTCTCCGCCACTGCCGTCGGCATCATCGAGCGCCCCCGACTATCGGCCGAGACGGCTAGCTCGGGGAGGGGATGGCTATGGCGCGTCCGTCGACATCGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGTATCTGCAAGGAATTGGTGAGAGGACGGTCATCGCTAGACAGCTCGCGCTTCTCGATCGAGACGGTGACTGGCGGCAGCATCACGAATATGTTGCTGAGTGTCTCCGTATAAGATGGCAAGGGCAACAAGTCTTCTGTGACTGTTCGGTTGTATGGCCCAAATACAGCCTTGGTGATTGATCGGAAGAAGGAAATGCAGGCTATACCACATCTCTCAGCTCCAGGGTTTGGGGTCAGCTACTTGGAACATTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB657186             [                                                                                                      CTCATCCCACCCTCTCCCTCTCCCGCTGCGTCTGCCTCCCCCTCGCGCCGCCGTCGTCGCCTCCGCCTTCCCCTCGCGCCCCCGCCTCCGCCTTGCAACGTAGCCATCGTCGTCCCCGTCGGCTCGCGCTGCCGCCTCCACCTCCCCCGCCGCTGCCGCCGCCGTCGTCGCGTTGTCGTCTCCGAGCGCCTCCGCCTCCCGCCTCGCGCCGCCGCCGAGCGCAGCCATCCCCGTCTCCGCCACTGCCGTCGGCATCATCGAGCGCCCCCGACTAGCGGCCGAGACGGCGAGCTCGGGGAGGCGATGGCTAGGGCGCGTCCGTCGACATCGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGTATCTGCAAGGAATTGGTGAGAGGACGGTCATCGCTAGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTGGCGGCAGCATCACGAATATGTTGCTGAGTGTCTCCGTAGAAGATGGCAAGGGCAACAAGTCTTCTGTGACTGTTCGTTTGTATGGCCCAAATACAGCCTTGGTGATTGATCGGAAGAAGGAAATGCAGGCTATACCACATCTCTCAGCTCCAGGGTTTGGGGTCAGCTACTTGGAACATTTGAAAATGGAATGGTCCAGTCATTCATCTATGCACGTACATTAACTCCTTCAGCAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTG                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB657187             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCCGCATCATAGGTATCTGCAAGGAATTGGTGAGAGGACGGTCATCGCTAGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTGGCGGCAGCATCACGAATATGTTGCTGAGTGTCTCCGTAGAAGATGGCAAGGGCAACAAGTCTTCTGTGACTGTTCGTTTGTATGGCCCAAATACAGCCTTGGTGATTGATCGGAAGAAGGAAATGCAGGCTATACCACATCTCTCAGCTCCAGGGTTTGGGGTCAGCTACTTGGAACATTTGAAAATGGAATGGTCCAGTCATTCATCTATGCACGTACATTAACTCCTTCAGCAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAATGCACCGCGGAGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACATATACCCCTACAGTAATCATGGGAAAGCTATTATCTGACAACGGGAGTCAAGAGTTCGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGTTATGTCCATATTGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCAATGCTTTAGGCTTTTCCATGCTGCTGTAATGTAAAATCATTAGGAAATTCCCGAAGTACACATCGCTTACAATGATTGACAGACTTAGTGTTGTTTTAAATTGAACGCTTGTT]


>consensus_10217#0 GCCACTCGCCGCCGCCTCCTGCCCCTCGCGCCCCCCGGTCGCGCCCACCTCTCCGCCGCG GCCGCGTCCACCTCCCCCAAAAAACCCTAGCCGCCGCCACCTCTCATCCCACCCTCTCCC TCTCCCGCTGCGTCTGCCTCCCCCTCGCGCCGCCGTCGTCGCCTCCGCCTTCCCCTCGCG CCCGCGCCTCCGCCTTGCAACGTAGCCATCGTCGTCTCCGTCGGCTCGCGCTGCCGCCTC CACCTCCCCCGCCGGTGCCGCCGCCGTCGTCGCGTTGTCGTCTCCGAGCGCCTCCGCCTC CCGCCTCGCGCCGCCGCCGAGCGCAGCCATCCCCGTCTCCGCCACTGCCGTCGGCATCAT CGAGCGCCCCCGACTATCGGCCGAGACGGCTAGCTCGGGGAGGGGATGGCTATGGCGCGT CCGTCGACATCGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGTATCTGCAAGG AATTGGTGAGAGGACGGTCATCGCTAGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTG GCGGCAGCATCACGAATATGTTGCTGAGTGTCTCCGTAGAAGATGGCAAGGGCAACAAGT CTTCTGTGACTGTTCGTTTGTATGGCCCAAATACAGCCTTGGTGATTGATCGGAAGAAGG AAATGCAGGCTATACCACATCTCTCAGCTCCAGGGTTTGGGGTCAGCTACTTGGAACATT TGAAAATGGAATGGTCCAGTCATTCATCTATGCACGTACATTAACTCCTTCAGCAAGGAT GTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGAC AAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAATGCACCGCGG AGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACATATACCCCTA CAGTAATCATGGGAAAGCTATTATCTGACAACGGGAGTCAAGAGTTCGGTGATTTTAAGC TCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGTTATGTCCATAT TGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCAATGCTTTAGGCTT TTCCATGCTGCTGTAATGTAAAATCATTAGGAAATTCCCGAAGTACACATCGCTTACAAT GATTGACAGACTTAGTGTTGTTTTAAATTGAACGCTTGTT



consensusID : consensus_10217#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 751
fasta sequence
                              [GACCACATCGAGCGAGCCGCCGAGCCGGACTCCTCCTCGAATCGAATCGAAACGCCCCCGATTTGAAGCAGCAAAAAGATATCCGAAATCGAATCGAGTCGAGTACTCGAGTGACGCCTTCGCCTCGGGTGTCCAGGAATAGCTCGAGCTTCCGCCACGCCACGCGCGAGGGAAGGAGCGGGTCGCGCGGGGGAGGGGGGGCATGGGATCGGAGGGGCGGANTGGAGCGGGGCGGCGGCGGTGGGGGGCGGCGTGGAAGGGGAGGCGGCGATCGCGGCGGTGGTGGCGCCTNCGCCGGGGGACGTGCCGGCGTCGGGCGCGTCCGTGGACATAGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGTATCTGCAAGGAATTGGTGAGGGGGTGGTCATCGCTGGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTGGCGGCATCACGAATATGTTGCTGAANGTGTCCGCAGAAGATGGCAAGGGTAACAAGTCTTCTGTGACAGTTCGTTTGTATGGCCCAAATACAGACTTGGTGATTGATCGGAAGAGGGAATTGCAGGCTATACCACATCTCTCAGCTGCAGGGTTTGGGGCTCAGCTACTTGGAACATTTGAAAATGGAATGGTCCAGTCATTCATCTATGCACGAACATTAACTCCTTCAGACATGAAGGAACCTAGAATAGCAGCTGAAGATTGCCAAAGAGATTCGCAGATTCCATCAAGTTGATATACCAGGATCA]

[+] EMBL AU062514             [GACCACATCGAGCGAGCCGCCGAGCCGGACTCCTCCTCGAATCGAATCGAAACGCCCCCGATTTGAAGCAGCAAAAAGATATCCGAAATCGAATCGAGTCGAGTACTCGAGTGACGCCTTCGCCTCGGGTGTCCAGGAATAGCTCGAGCTTCCGCCACGCCACGCGCGAGGGAAGGAGCGGGTCGCGCGGGGGAGGGGGGGCATGGGATCGGAGGGGCGGANTGGAGCGGGGCGGCGGCGGTGGGGGGCGGCGTGGAAGGGGAGGCGGCGATCGCGGCGGTGGTGGCGCCTNCGCCGGGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU163603             [                                                                                                               TGACGCCTTCGCCTCGGGTGTCCAGGAATAGCTCGAGCTTCCGCCACGCCACGCGCGAGGGAAGGAGCGGGTCGCGCGGGGGAGGGGGGGCATGGGATCGGAGGGGCGGACTGGAGCGGGGCGGCGGCGGTGGGGGGCGGCGTGGAAGGGGAGGCGGCGATCGCGGCGGTGGTGGCGCCTGCG CGGGGGACGTGCCGGCGTCGGGCGCGTCCGTGGACATAGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGTATCTGCAAGGAATTGGTGAGGGGGTGGTCATCGCTGGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTGGCGGCATCACGAATATGTTGCTGAANGTGTCCGCAG                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU030345             [                                                                                                                                                                                                                                                                                                                                                                                                            TGGTCATCGCTGGACAGCTCGCGCTTCTCGATCGAGACGGTGTCTGGCGGCATCACGAATATGTTGCTGAAGGTGTCCGCAGAAGATGGCAAGGGTAACAAGTCTTCTGTGACAGTTCGTTTGTATGGCCCAAATACAGACTTGGTGATTGATCGGAAGAGGGAATTGCAGGCTATACCACATCTCTCAGCTGCAGGGTTTGGGGCTCAGCTACTTGGAACATTTGAAAATGGAATGGTCCAGTCATTCATCTATGCACGAACATTAACTCCTTCAGACATGAAGGAACCTAGAATAGCAGCTGAAGATTGCCAAAGAGATTCGCAGATTCCATCAAGTTGATATACCAGGATCA]


>consensus_10217#1 GACCACATCGAGCGAGCCGCCGAGCCGGACTCCTCCTCGAATCGAATCGAAACGCCCCCG ATTTGAAGCAGCAAAAAGATATCCGAAATCGAATCGAGTCGAGTACTCGAGTGACGCCTT CGCCTCGGGTGTCCAGGAATAGCTCGAGCTTCCGCCACGCCACGCGCGAGGGAAGGAGCG GGTCGCGCGGGGGAGGGGGGGCATGGGATCGGAGGGGCGGANTGGAGCGGGGCGGCGGCG GTGGGGGGCGGCGTGGAAGGGGAGGCGGCGATCGCGGCGGTGGTGGCGCCTNCGCCGGGG GACGTGCCGGCGTCGGGCGCGTCCGTGGACATAGCGCTGCCGCTCCCGGAGATGACGCCC CGCATCATAGGTATCTGCAAGGAATTGGTGAGGGGGTGGTCATCGCTGGACAGCTCGCGC TTCTCGATCGAGACGGTGTCTGGCGGCATCACGAATATGTTGCTGAANGTGTCCGCAGAA GATGGCAAGGGTAACAAGTCTTCTGTGACAGTTCGTTTGTATGGCCCAAATACAGACTTG GTGATTGATCGGAAGAGGGAATTGCAGGCTATACCACATCTCTCAGCTGCAGGGTTTGGG GCTCAGCTACTTGGAACATTTGAAAATGGAATGGTCCAGTCATTCATCTATGCACGAACA TTAACTCCTTCAGACATGAAGGAACCTAGAATAGCAGCTGAAGATTGCCAAAGAGATTCG CAGATTCCATCAAGTTGATATACCAGGATCA



consensusID : consensus_10217#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 737
fasta sequence
                              [CCTTCAGGCAATCATATTGCTGTTATTCGTGGATGGGGTGGGCTCTTTCTCACTGTTATATTGTCTAATATCATCTTTCTCTTTTTTCATTTTTTGTCCATTGTGAATTCAGACAAAAAAAATTCAAACAAGGCCTTAATTTTTATGATAAATTTTCATTAGATTAATTAGGACTTTCAAAAGGATATAAATCAACCTATAGTATTGGAATTGCGTAAGGCTTTCTTTACAGTCGTGTGATTCGTCACGTTTGTTGCTTGCTGTGGCCATACAAAGATATCCGTCTTGTGTTCTGATAGATGTATTGACATCAATATTGTTATGTTATCAATTCAGCAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAATGCACCGCGGAGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACATATACCCCTACAGTAATCATGGGAAAGCTATTATCTGACAACGGGAGTCAAGAGTTCGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGTTATGTCCATATTGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCAATGCTTTAGGCTTTTCCATGCTGCTGTAATGTAAAATCATTAGGAAA]

[+] EMBL AF358774             [CCTTCAGGCAATCATATTGCTGTTATTCGTGGATGGGGTGGGCTCTTTCTCACTGTTATATTGTCTAATATCATCTTTCTCTTTTTTCATTTTTTGTCCATTGTGAATTCAGACAAAAAAAATTCAAACAAGGCCTTAATTTTTATGATAAATTTTCATTAGATTAATTAGGACTTTCAAAAGGATATAAATCAACCTATAGTATTGGAATTGCGTAAGGCTTTCTTTACAGTCGTGTGATTCGTCACGTTTGTTGCTTGCTGTGGCCATACAAAGATATCCGTCTTGTGTTCTGATAGATGTATTGACATCAATATTGTTATGTTATCAATTCAGCAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAATGCACCGCGGAGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACATATACCCCTACAGTAATCATGGGAAAGCTATTATCTGACAACGGGAGTCAAGAGTTCGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGTTATGTCCATATTGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCAATGCTTTAGGCTTTTCCATGCTGCTGTAATGTAAAATCATTAGGAAA]


>consensus_10217#2 CCTTCAGGCAATCATATTGCTGTTATTCGTGGATGGGGTGGGCTCTTTCTCACTGTTATA TTGTCTAATATCATCTTTCTCTTTTTTCATTTTTTGTCCATTGTGAATTCAGACAAAAAA AATTCAAACAAGGCCTTAATTTTTATGATAAATTTTCATTAGATTAATTAGGACTTTCAA AAGGATATAAATCAACCTATAGTATTGGAATTGCGTAAGGCTTTCTTTACAGTCGTGTGA TTCGTCACGTTTGTTGCTTGCTGTGGCCATACAAAGATATCCGTCTTGTGTTCTGATAGA TGTATTGACATCAATATTGTTATGTTATCAATTCAGCAAGGATGTAAATGGAAAAGGTTT CAGGGCCAATGGGAGTGAATCATCGAATAGACAGCCAAAGGACAAAGGATTCTCATGAAA AACAAGGATTTCAGCTTACAAGAGGTGCTTGAATGCACCGCGGAGTGTATTTTCACATTT TGTTGGAGAAATAATTGAGGCAATGGCTGGACATATACCCCTACAGTAATCATGGGAAAG CTATTATCTGACAACGGGAGTCAAGAGTTCGGTGATTTTAAGCTCGTTATACATAGAATG CTGTCTGTATCTTTATGAAAAAAGAATGCTGTTATGTCCATATTGATTTTATCCCATATG CAATTTACTTGCTGCTATAGCAGATCAGCAATGCTTTAGGCTTTTCCATGCTGCTGTAAT GTAAAATCATTAGGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10217#0      GCCACTCGCCGCCGCCTCCTGCCCCTCGCGCCCCCCGGTCGCGCCCACCTCTCCGCCGCG 60
consensus_10217#2      ------------------------------------------------------------
consensus_10217#1      ------------------------------------------------------------
                                                                                   

consensus_10217#0      GCCGCGTCCACCTCCCCCAAAAAACCCTAGCCGCCGCCACCTCTCATCCCACCCTCTCCC 120
consensus_10217#2      ------------------------------------------------------------
consensus_10217#1      ------------------------------------------------------------
                                                                                   

consensus_10217#0      TCTCCCGCTGCGTCTGCCTCCCCCTCGCGCCGCCGTCGTCGCCTCCGCCTTCCCCTCGCG 180
consensus_10217#2      ------------------------------------------------------------
consensus_10217#1      ------------------------------------------------------------
                                                                                   

consensus_10217#0      CCCGCGCCTCCGCCTTGCAACGTAGCCATCGTCGTCTCCGTCGGCTCGCGCTGCCGCCTC 240
consensus_10217#2      ------------------------------------------------------------
consensus_10217#1      ------------------------------------------------------------
                                                                                   

consensus_10217#0      CACCTCCCCCGCCGGTGCCGCCGCCGTCGTCGCGTTGTCGTCTCCGAGCGCCTCCGCCTC 300
consensus_10217#2      ------------------------------------------------------------
consensus_10217#1      ------------------------------------------------------------
                                                                                   

consensus_10217#0      CCGCCTCGCGCCGCCGCCGAGCGCAGCCATCCCCGTCTCCGCCACTGCCGTCGGCATCAT 360
consensus_10217#2      ------------------------------------------------------------
consensus_10217#1      ------------------------------------------------------------
                                                                                   

consensus_10217#0      CGAGCGCCCCCGACTATCGGCCGAGACGGCTAGCTCGGGGAGGGGATGGCTATGGCGCGT 420
consensus_10217#2      --------------------------------------------------------CCTT 4
consensus_10217#1      ------------------------------------------------GACCACATCGAG 12
                                                                                   

consensus_10217#0      CCGTCGA-CATCGCGCTGCCGCTCCCGGAGATGACGCCCCGCATCATAGGT---ATCTGC 476
consensus_10217#2      CAGGCAATCATATTGCTGTTATTCGTGGATGGGGTGGGCTCTTTCTCA--------CTGT 56
consensus_10217#1      CGAGCCGCCGAGCCGGACTCCTCCTCGAATCGAATCGAAACGCCCCCGATTTGAAGCAGC 72
                       *   *   *     *        *  * *               *           * * 

consensus_10217#0      AAGGAATTGGTGAGAGGACGGTCATCGCTAGACAGCTCGCGCTTCTCGATCGAGACGGTG 536
consensus_10217#2      TAT--ATTGTCTAATA-----TCATC-TTTCTCTTTTTTCATTTTTTGTCCATTGTGAAT 108
consensus_10217#1      AAAAAGATATCCGAAATCGAATCGAGTCGAGTACTCGAGTGACGCCTTCGCCTCGGGTGT 132
                        *     *             **                           *     *   

consensus_10217#0      TCTGGCGGCAGCATCACGAATATGTTGCTGAGTGTCTCCGTAGAAGATGGCAAGGGCAAC 596
consensus_10217#2      TCAGACAAAAAAAATTCAAACAAGGCCTTAATTTTTATGATAAATTTTCATTAGATTAAT 168
consensus_10217#1      CCAGGAATAGCTCGAGCTTCCGCCACGCCACGCGCGAGGGAAGGAGCGGGTCGCGCGGGG 192
                        * *            *                        *                  

consensus_10217#0      AAGTCTTCTGTGACTGTTCGTTTGTATGGCCCAAATACAGCCTTGGTGATTGATCGGAAG 656
consensus_10217#2      TAGGACTTTCAAAAGG---ATATAAATCAACC---TATAGTATTGG-AATTG--CGTAAG 219
consensus_10217#1      GAGGGGGGGCATGGGAT-CGGAGGGGCGGANT--GGAGCGGGGCGGCGGCGG--TGGGGG 247
                        **                                 *  *    **     *   *   *

consensus_10217#0      AAGGAAATGCAGGCTATACCACATCTCTCAGCTCCAGGGTTTGGGGTCAGCTACTTGGAA 716
consensus_10217#2      GCTTTCTTTACAGTCGTGTGA--TTCGTCACGTTTGTTGCTTGCTGTGGCCATACAAAGA 277
consensus_10217#1      GCGGCGTGGAAGGGGAGGCGGCGATCGCGGCGGTGGTGGCGC-CTNCGCCGGGGGACGTG 306
                                   *                         *                     

consensus_10217#0      CATTTGAAA-ATGGAATGGTCCAGTCATT--CATCTATGCACGTACATTAACTCCTTCAG 773
consensus_10217#2      TATCCGTCTTGTGTTCTGATAGATGTATTGACATCAATATTGTTATGTTATCAA-TTCAG 336
consensus_10217#1      CCGGCGTCGGGCGCGTCCGTGGACATAGCGCTGCCGCTCCCGG-AGATGACGCCCCGCAT 365
                            *      *      *  *   *       *  *      *  * *       ** 

consensus_10217#0      CAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGC- 832
consensus_10217#2      CAAGGATGTAAATGGAAAAGGTTTCAGGGCCAATGGGAGTGAATCATCGAATAGACAGC- 395
consensus_10217#1      CATAGGTAT--CTGCAAGGAATT----GGTGAGGGGGTGGTCATCGCTGGACAGCTCGCG 419
                       **  * * *   ** **    **    **  *  *** *   ***   * * **   ** 

consensus_10217#0      --CAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAA 890
consensus_10217#2      --CAAAGGACAAAGGATTCTCATGAAAAACAAGGATTTCAGCTTACAAGAGGTGCTTGAA 453
consensus_10217#1      CTTCTCGATCGAGACGGTGTCTGGCGGCATCACGAATATG--TTGCTGAANGTGTCCGCA 477
                             *  * *     * **  *    *  * ** *     ** *   * ***   * *

consensus_10217#0      TGCACCGCGGAGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACA 950
consensus_10217#2      TGCACCGCGGAGTGTATTTTCACATTTTGTTGGAGAAATAATTGAGGCAATGGCTGGACA 513
consensus_10217#1      GAAGATGGCAAGGGTA---ACAAGTCTTCTGTGACAGTTCGTT--TGTATGGCCCAAATA 532
                             *   ** ***    **  * ** *  ** *  *  **   * *  * *   * *

consensus_10217#0      TATACCCCTACAGTAATCATGGGAAAGCTATTATCTGACA-ACGGGAGTCAAGAGTTCGG 1009
consensus_10217#2      TATACCCCTACAGTAATCATGGGAAAGCTATTATCTGACA-ACGGGAGTCAAGAGTTCGG 572
consensus_10217#1      CAGACTTGGTGATTGATCG-GAAGAGGGAATTGCAGGCTATACCACATCTCTCAGCTGCA 591
                        * **      * * ***  *   * *  ***    *  * **   *      ** *   

consensus_10217#0      TGATTTTAAGCTCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGT 1069
consensus_10217#2      TGATTTTAAGCTCGTTATACATAGAATGCTGTCTGTATCTTTATGAAAAAAGAATGCTGT 632
consensus_10217#1      GGGTTTGGGGCTCAGC-TACTTGGAACAT--TTGAAAATGGAATGGTCCAGTCATTCATC 648
                        * ***   ****    *** * ***     *    *     ***    *   ** *   

consensus_10217#0      TATGTCC--ATATTGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCA 1127
consensus_10217#2      TATGTCC--ATATTGATTTTATCCCATATGCAATTTACTTGCTGCTATAGCAGATCAGCA 690
consensus_10217#1      TATGCACGAACATTAACTCCTTCAGACATG-AAGGAAC---CTAGAATAGCAGCTGAAGA 704
                       ****  *  * *** * *   **  * *** **   **   **   ******* * *  *

consensus_10217#0      ATGCTTTAGGCTTTTCCATGCTGCTGTAATGTAAAATCATTAGGAAATTCCCGAAGTACA 1187
consensus_10217#2      ATGCTTTAGGCTTTTCCATGCTGCTGTAATGTAAAATCATTAGGAAA------------- 737
consensus_10217#1      TTGCCAAAGAGATTCGCA-GATTCCATCAAGTTGATATACCAGGATCA------------ 751
                        ***   **   **  ** * * *  * * **  *   *  ****               

consensus_10217#0      CATCGCTTACAATGATTGACAGACTTAGTGTTGTTTTAAATTGAACGCTTGTT 1240
consensus_10217#2      -----------------------------------------------------
consensus_10217#1      -----------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)