These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10233#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2501 fasta sequence [CTCCGGTCACTCCTCGCGCTCGAGGATCCCAGGTCGCCGACCGCCTCGGCGTCCTACCGGATCCTGGTCGCCGTCGTCGCCTGCCTCTTCGTCGCCGCTCTCGTCTCCGCTCCTTCCGTCTGGTCACGCATCAACGCGCCCTATCTGTGCCGCAAGGACGGGATTCGGCTCCACTGCCCCAGGGTGAACGAGCGGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGATTAAACCAGCAGCGAATAGCCGTACGGATGTTCTTTCCTCACATTATTAGCTTGCTGAAGCTGTGTTGTGTAATCAGTAGTTAACTGCGATACTCGATGTATTTGCAGATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCACATATGTGATGCCACTATAGAGGCATCTACTTCAAACCATGTAGGGGTTAGCATGTATTATAGGGTCAAAATTAGCTTATTTTACTATAGGATGCCAACAGTCTTATACAACCGAAAAGTGCAAGGGCAAAGGAAAATTGTATCACTAGGACAGGTACTGCTTATGGGCATTTTTTTCCTTATTTATTCTTCCTTTTTTCCCCTCTTGTCATGATGTTGAATGATTATAATATGTTTCTATTTTGGTCATCACTATCTGCTGTGTTTTCACCCATAGTTAGCAGTTACTATATGTGCTATATCTATAATTGATTAACACTGGAACATAGTCTTCCATGAATGTAACTTATTTTATTTTTGATGCTGATTATAACAGGCGAACTGTGAAAAATATTCCAAAGTATGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTAATGTCTTATCATCATGACTGCACCTCATCCATACATCTTGAGATTGGTTGTATAACTTTTTAGCGCTGTTACTGTCCTTGACATCAGAGTCTTTTGTTGTAAAGTGAATATTGCTCCCGGTTCCTCCCCTAAGTATATGCCTTACAATTTCGTTCACATCAATTGATGTGATTGAGTGTAACCTAAGCCTGCAATTTCAGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTA] [+] EMBL AK072400 [CTCCGGTCACTCCTCGCGCTCGAGGATCCCAGGTCGCCGACCGCCTCGGCGTCCTACCGGATCCTGGTCGCCGTCGTCGCCTGCCTCTTCGTCGCCGCTCTCGTCTCCGCTCCTTCCGTCTGGTCACGCATCAACGCGCCCTATCTGTGCCGCAAGGACGGGATTCGGCTCCACTGCCCCAGGGTGAACGAGCGGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGATTAAACCAGCAGCGAATAGCCGTACGGATGTTCTTTCCTCACATTATTAGCTTGCTGAAGCTGTGTTGTGTAATCAGTAGTTAACTGCGATACTCGATGTATTTGCAGATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCACATATGTGATGCCACTATAGAGGCATCTACTTCAAACCATGTAGGGGTTAGCATGTATTATAGGGTCAAAATTAGCTTATTTTACTATAGGATGCCAACAGTCTTATACAACCGAAAAGTGCAAGGGCAAAGGAAAATTGTATCACTAGGACAGGTACTGCTTATGGGCATTTTTTTCCTTATTTATTCTTCCTTTTTTCCCCTCTTGTCATGATGTTGAATGATTATAATATGTTTCTATTTTGGTCATCACTATCTGCTGTGTTTTCACCCATAGTTAGCAGTTACTATATGTGCTATATCTATAATTGATTAACACTGGAACATAGTCTTCCATGAATGTAACTTATTTTATTTTTGATGCTGATTATAACAGGCGAACTGTGAAAAATATTCCAAAGTATGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTAATGTCTTATCATCATGACTGCACCTCATCCATACATCTTGAGATTGGTTGTATAACTTTTTAGCGCTGTTACTGTCCTTGACATCAGAGTCTTTTGTTGTAAAGTGAATATTGCTCCCGGTTCCTCCCCTAAGTATATGCCTTACAATTTCGTTCACATCAATTGATGTGATTGAGTGTAACCTAAGCCTGCAATTTCAGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTA] consensusID : consensus_10233#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1092 fasta sequence [TGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTAAAATCCAACGACACAT] [+] EMBL AK060934 [TGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTAAAATCCAACGACACAT] consensusID : consensus_10233#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 640 fasta sequence [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA] [-] EMBL CA762623 [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA] [-] EMBL CA762624 [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA] [-] EMBL CA762622 [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA] consensusID : consensus_10233#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 540 fasta sequence [GGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGTTTAAACCAGCAGCGAATAGCCATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCAC] [+] EMBL CF306194 [GGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGTTTAAACCAGCAGCGAATAGCCATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCAC] consensusID : consensus_10233#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence [GAGCNTGGGGAAATAGGTATTATTTTACNTGCAATGGGATATACAAAGGAAACTNAGATATATGTTNCATCGGGGTCAAGTTTATGGTGGAACGAATAGAATGGCTCCCGTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGACTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCTGGTTTCCTGAAATCGGACGTGTTCGTCATCACGTGGCAATT] [+] EMBL D42421 [GAGCNTGGGGAAATAGGTATTATTTTACNTGCAATGGGATATACAAAGGAAACTNAGATATATGTTNCATCGGGGTCAAGTTTATGGTGGAACGAATAGAATGGCTCCCGTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGACTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCTGGTTTCCTGAAATCGGACGTGTTCGTCATCACGTGGCAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTCCGGTCACTCCTCGCGCTCGAGGATCCCAGGTCGCCGACCGCCTCGGCGTCCTACCGG 60 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 ATCCTGGTCGCCGTCGTCGCCTGCCTCTTCGTCGCCGCTCTCGTCTCCGCTCCTTCCGTC 120 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TGGTCACGCATCAACGCGCCCTATCTGTGCCGCAAGGACGGGATTCGGCTCCACTGCCCC 180 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 AGGGTGAACGAGCGGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAG 240 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCT 300 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GGGTATATTTTTATTCATGCCGAGGGTGGATTAAACCAGCAGCGAATAGCCGTACGGATG 360 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TTCTTTCCTCACATTATTAGCTTGCTGAAGCTGTGTTGTGTAATCAGTAGTTAACTGCGA 420 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TACTCGATGTATTTGCAGATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACA 480 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGAT 540 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 ATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGAT 600 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 ATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCC 660 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACA 720 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGC 780 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCACATATGTGATGCCACTATAGA 840 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GGCATCTACTTCAAACCATGTAGGGGTTAGCATGTATTATAGGGTCAAAATTAGCTTATT 900 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TTACTATAGGATGCCAACAGTCTTATACAACCGAAAAGTGCAAGGGCAAAGGAAAATTGT 960 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 ATCACTAGGACAGGTACTGCTTATGGGCATTTTTTTCCTTATTTATTCTTCCTTTTTTCC 1020 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CCTCTTGTCATGATGTTGAATGATTATAATATGTTTCTATTTTGGTCATCACTATCTGCT 1080 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GTGTTTTCACCCATAGTTAGCAGTTACTATATGTGCTATATCTATAATTGATTAACACTG 1140 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GAACATAGTCTTCCATGAATGTAACTTATTTTATTTTTGATGCTGATTATAACAGGCGAA 1200 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTGTGAAAAATATTCCAAAGTATGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGA 1260 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTAATGTC 1320 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ------------------------------------------------------------ consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TTATCATCATGACTGCACCTCATCCATACATCTTGAGATTGGTTGTATAACTTTTTAGCG 1380 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ---------------------------------------------TGCATCGGCGCAGTT 15 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTGTTACTGTCCTTGACATCAGAGTCTTTTGTTGTAAAGTGAATATTGCTCCCGGTTCCT 1440 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 CTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATT 75 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CCCCTAAGTATATGCCTTACAATTTCGTTCACATCAATTGATGTGATTGAGTGTAACCTA 1500 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 TGTTGATAGGCTGGGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGT 135 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 AGCCTGCAATTTCAGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGT 1560 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 TAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAAC 195 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 TAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAAC 1620 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 AAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGA 255 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 AAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGA 1680 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 GAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAAT 315 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAAT 1740 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 GATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTG 375 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 GATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTG 1800 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 GTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGG 435 consensus_10233#2 ------------------------------------------------------------ consensus_10233#4 -------------------------------------------GAGCNTGGGGAAATAGG 17 consensus_10233#0 GTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGG 1860 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 TATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGG-TC 494 consensus_10233#2 ----ACGAGACAAG-GGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGG-TC 54 consensus_10233#4 TATTATTTTACNTGCAATGGGATATACAAAGGAAACTNAGATATATGTTNCATCGGGGTC 77 consensus_10233#0 TATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGG-TC 1919 consensus_10233#3 -----------------GGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTG 43 ** ** * *** * * * ** * * * consensus_10233#1 AAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTA 554 consensus_10233#2 AAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTA 114 consensus_10233#4 AAGTTTATGGTGGAACGAATAGAATGGCTCCCGTAAGGAATATGTTCCCCAATTTGGTTA 137 consensus_10233#0 AAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTA 1979 consensus_10233#3 GAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAAC 103 * ** * * ** ** *** ** * ** consensus_10233#1 CAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 614 consensus_10233#2 CAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 174 consensus_10233#4 CAAAAGAAGAC--TGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 195 consensus_10233#0 CAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 2039 consensus_10233#3 CTCTGGGTATATTTTTATTCATGCCGAGGGTGGTTTAAACCA-GCAGCGAATAGCCATAT 162 * * * * ** * * * * * ** * *** * *** consensus_10233#1 TTGCTGC-ATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGT 673 consensus_10233#2 TTGCTGC-ATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGT 233 consensus_10233#4 TTGCTGC-ATTGGACTTC-TGGTTT-CCTGAAATCGGACGTGTTCGTCATCAC-----GT 247 consensus_10233#0 TTGCTGC-ATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGT 2098 consensus_10233#3 GTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGC 222 * *** *** * ** * * * * ** * ** * * * consensus_10233#1 GGCAATTTCGCCAAGCTGATCAT-CGGTTTCCGCCGCTA-CATGGGTCGGCATCGGCTCA 731 consensus_10233#2 GGCAATTTCGCCAAGCTGATCAT-CGGTTTCCGCCGCTA-CATGGGTCGGCATCGGCTCA 291 consensus_10233#4 GGCAATT----------------------------------------------------- 254 consensus_10233#0 GGCAATTTCGCCAAGCTGATCAT-CGGTTTCCGCCGCTA-CATGGGTCGGCATCGGCTCA 2156 consensus_10233#3 AGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCA 282 * * consensus_10233#1 AGTCTATCAAGCCAGACAAGGGCCTCAT-GTCCAAGTTCTTCGGCGATCCCT-ACATGCC 789 consensus_10233#2 AGTCTATCAAGCCAGACAAGGGCCTCAT-GTCCAAGTTTTTCGGCGATCCCT-ACATGCC 349 consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 AGTCTATCAAGCCAGACAAGGGCCTCAT-GTCCAAGTTCTTCGGCGATCCCT-ACATGCC 2214 consensus_10233#3 TAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAA 342 consensus_10233#1 ATGGGCAACTTTCGTGGAGGATGTGATGA-TCACTCACCAGACACGAACTGGCCTCCCTG 848 consensus_10233#2 ATGGGCAACTTTCGTGGAGGATGTGATGA-TCACTCACCAGACACGAACTGGCCTCCCTG 408 consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 ATGGGCAACTTTCGTGGAGGATGTGATGA-TCACTCACCAGACACGAACTGGCCTCCCTG 2273 consensus_10233#3 AAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCT 402 consensus_10233#1 AGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAG 908 consensus_10233#2 AGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAG 468 consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 AGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAG 2333 consensus_10233#3 TTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATT--- 459 consensus_10233#1 CTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTA 968 consensus_10233#2 CTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTA 528 consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTA 2393 consensus_10233#3 CTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTT--TGTAGTTGTCTTT 517 consensus_10233#1 AGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTAT 1028 consensus_10233#2 AGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTAT 588 consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 AGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTAT 2453 consensus_10233#3 CATTCACACATTGCATTGT-CCAC------------------------------------ 540 consensus_10233#1 CTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTAAAATCCAACGAC 1088 consensus_10233#2 CTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA-------- 640 consensus_10233#4 ------------------------------------------------------------ consensus_10233#0 CTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTA------------ 2501 consensus_10233#3 ------------------------------------------------------------ consensus_10233#1 ACAT 1092 consensus_10233#2 ---- consensus_10233#4 ---- consensus_10233#0 ---- consensus_10233#3 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||