These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10289#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2107 fasta sequence [ACTGTCTCACTCTCTCTTGCCCACATTTTTTTCCCCCGGAGAGCGACAACTGCAGGGCCCAAAAAGAGGCCGGATTCTTTGGTGTTTTCTGAACCTTCTTTACTTGTCCTCAAATGGCCACCTCTTCCTCCTCCTCCTCGCATTTCCTCCCATAGCTCGCATTCGCATTCGCATCGCACTCACCCTCTCCTGCAAGCAAAGCTAAAGCTTCGGTTTGGTTATTTCCTTTCCTCGCCGCTTTTTTCTTTGCTTCTTGCGGTGGCCATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCGCGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAAGGTGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCAAATCGACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGGGCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACGTCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACAGGGTCCAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAGGATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGATTTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAAAGATCAGTGATACAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACCTAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATTCGCTACATCAGCAGTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCCACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGCATTGCATTGCTTTTTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGGTATCAACAGCAGATGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCATATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTGGGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAAAATCATCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATCACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGAACTACGCCTTCATGACGAAGGAGCCTGAAAAAGTTCACCATGTCCGCCATGGCCGGCCTTACTTCAACGGCTGGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAAACAACCAACCCTTCTGCCCTCAATTTTCCCCCTCTCTCTTTATCCCTGTTTCTTTCCTATATGATTAGATTTACCGCTCGCGTTTTCGCTTCTCCTGACCTCCGCGACGCCTGTAACAAAAGAAAGAAAAAGCGGGGGGGAAGTAGAGGCACTAATCTTCTTCAGTCCTGACCTGTGCAATGCAATGGCAAACACCTGGGGAGGGGTTTTTGTACTACACCCTGATGATGATCAGACACTCTTACACTACCATCCTGTACATATATTTTGTTGTTCACCAGCTCAGCTG] [+] EMBL AK122070 [ACTGTCTCACTCTCTCTTGCCCACATTTTTTTCCCCCGGAGAGCGACAACTGCAGGGCCCAAAAAGAGGCCGGATTCTTTGGTGTTTTCTGAACCTTCTTTACTTGTCCTCAAATGGCCACCTCTTCCTCCTCCTCCTCGCATTTCCTCCCATAGCTCGCATTCGCATTCGCATCGCACTCACCCTCTCCTGCAAGCAAAGCTAAAGCTTCGGTTTGGTTATTTCCTTTCCTCGCCGCTTTTTTCTTTGCTTCTTGCGGTGGCCATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCGCGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAAGGTGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCAAATCGACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGGGCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACGTCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACAGGGTCCAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAGGATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGATTTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAAAGATCAGTGATACAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACCTAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATTCGCTACATCAGCAGTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCCACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGCATTGCATTGCTTTTTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGGTATCAACAGCAGATGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCATATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTGGGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAAAATCATCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATCACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGAACTACGCCTTCATGACGAAGGAGCCTGAAAAAGTTCACCATGTCCGCCATGGCCGGCCTTACTTCAACGGCTGGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGATACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAAACAACCAACCCTTCTGCCCTCAATTTTCCCCCTCTCTCTTTATCCCTGTTTCTTTCCTATATGATTAGATTTACCGCTCGCGTTTTCGCTTCTCCTGACCTCCGCGACGCCTGTAACAAAAGAAAGAAAAAGCGGGGGGGAAGTAGAGGCACTAATCTTCTTCAGTCCTGACCTGTGCAATGCAATGGCAAACACCTGGGGAGGGGTTTTTGTACTACACCCTGATGATGATCAGACACTCTTACACTACCATCCTGTACATATATTTTGTTGTTCACCAGCTCAGCTG] [+] EMBL AK064807 [ TCCCATAGCTCGCATTCGCATTCGCATCGCACTCACCCTCTCCTGCAAGCAAAGCTAAAGCTTCGGTTTGGTTATTTCCTTTCCTCGCCGCTTTTTTCTTTGCTTCTTGCGGTGGCCATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCGCGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAAGGTGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCAAATCGACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGGGCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACGTCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACAGGGTCCAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAGGATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGATTTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAAAGATCAGTGATACAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACCTAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATCCGCTACATCAGCAGTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCCACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGCATTGCATTGCTTTTTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGGTATCAACAGCAGATGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCATATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTGGGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAAAATCATCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATCACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGGACTACGCCTTCATGACGAAGGAGCCTGAAAAAGTTCACCATGTCCGCCATGGCCGGCCTTACTTCAACGGCTGGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAAACAACCAACCCTTCTGCCCTCAATTTTCCCCCTCTCTCTTTATCCCTGTTTCTTTCCTATATGATTAGATTTACCGCTCGCGTTTTCGCTTCTCCTGACCTCCGCGACGCCTGTAACAAAAGAAAGAAAAAGCGGGGGGGAAGTAGAGGCACTAATCTTCTTCAGTCCTGACCTGTGCAATGCAATGGCAAACACCTGGGGAGGGG ] [+] EMBL CA767564 [ AAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCACAAGAACTATGCCTTCATGACAAAGGAGCCTGAAAAAGTTCACCATGTCCGCCATGGCCGGCCTTACTTCAATGGCTGGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTCGGTGCCGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGATATCGCAACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACA ACTACTATTAGACAACCAACCCTTTTGCCCTCAATTTTCCCCCTCTCTCTTTATCCCTGTT TTTCCTATATGATTAGATTTACCGCTCCCGTTTTCGCTTCTCCTGACCTCCGCGACGCCTGTAACAAAAGAAAGAAAAAGC GGGGTGAAGTAGAGGCACTAAT ] consensusID : consensus_10289#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1873 fasta sequence [GAAAAGCTCGGATTCTTGGCGGTTTCCCCCACCATTTCCCCCTCCTCGATCTGGGCCTCCTCCCCGCAAGCGTGCGCCTCGCATTCCCACCGAGCGTGCCTACGTGCTGCGCTTTGCTGTGCTGCGGGAGGATGGAGGGTGGGGGGAGAGGCGGCGGCCCCGTGGTGGCGGCGCTGCTGCTGGCCGCGCTCCTCCTCGCCGCCGTCGCTCCGGCCTCCGCGTCGTCGTACCCCGCAAAGGTGGTGAGTGGGTTCCTCTCCAACGCGGCGTCGTCGGTGATGAAGCGGCTGTGGTCGCTCAAATCCACCACGAAGACAGGAAGCGGAGGGAAGTCGATGGTGAAGTACGAGGGCGGGTACACCGTGGAGACGGTCTTCGACGGGAGCAAGCTGGGGATCGAGCCCTACGCGGTGGAGGTCACCCAGGGCGGCGAGCTGCTCGTCATGGACTCCATGAACAGCAACATCTACAGGATCGCCCTGCCGCTGTCTCGATATAGCAGACCAAAGCTTGTAGCTGGTTCTCCGGAAGGATTTCCTGGTCATGTTGATGGAAGGCCTCGAGAGGCCAGGATGAACCATCCAAAGGGATTTACGGTGGACGGCAGGGGTAACATTTATGTGGCTGATGCTATGAACATGGCTATTAGAAAGATCAGTGACACAGGGGTTACAACTATTGCTGGGGGGAAATCAAGCAGAGGAGGGCATGTTGATGGACCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAGTCCGCTATATTGGCAGTAGCTGCTCCCTTTTGGTGATTGACAGAGGAAACCAAGCGATTCGGGAGATTCAACTCAACTTCGATGACTGTGTATATCAGTATGAAGCTGGTTTTCCTCTAGGAGTTGCGGTGCTTCTTGCTGCTGCGTTCTTTGGCTACATGCTCGCGTTGCTCCAACGCAGGGTATTAGGGATGGTGTCAACAGAAGATGAACCTGAGACTCAGACTCCACTAAAAGCTAGCATTGCAAGCATCCCTCCATACCAGAAGCCGCTAAAACAATCTGTCCGTCCACCGTTAATCCCAAATGAGGATGAATCTGAGAAACAAGAGGTTGAAGAGGGGTTCTTTACCTCAATCGGTAAACTCATCGTGGGAGCCAAATCGTCTGTTGCAGAGATAGTTGGTGCAGCCTTTTCTAGAAAGAAGCGTTTAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTTCAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCAACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCCGTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGATCCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAACTGGTAGATGGCCAGATGTCCTTTTTTGCAGCTACATGATTAGATTTACTGCTCGTTAAGTTATTTTGCCGTCGTCGAATTTGTACTGCCTGAAACAGATAAATAGAAATTCAGGAAGTACCGGTGATATGGGCAAAGTCGAAAGCTGGTTTTTGCTGGATGAACGTCGTGATCTTAGACCTCTACTGATATATATATCTATGTAAATGGAATGTGTTTTTT] [+] EMBL AK101253 [GAAAAGCTCGGATTCTTGGCGGTTTCCCCCACCATTTCCCCCTCCTCGATCTGGGCCTCCTCCCCGCAAGCGTGCGCCTCGCATTCCCACCGAGCGTGCCTACGTGCTGCGCTTTGCTGTGCTGCGGGAGGATGGAGGGTGGGGGGAGAGGCGGCGGCCCCGTGGTGGCGGCGCTGCTGCTGGCCGCGCTCCTCCTCGCCGCCGTCGCTCCGGCCTCCGCGTCGTCGTACCCCGCAAAGGTGGTGAGTGGGTTCCTCTCCAACGCGGCGTCGTCGGTGATGAAGCGGCTGTGGTCGCTCAAATCCACCACGAAGACAGGAAGCGGAGGGAAGTCGATGGTGAAGTACGAGGGCGGGTACACCGTGGAGACGGTCTTCGACGGGAGCAAGCTGGGGATCGAGCCCTACGCGGTGGAGGTCACCCAGGGCGGCGAGCTGCTCGTCATGGACTCCATGAACAGCAACATCTACAGGATCGCCCTGCCGCTGTCTCGATATAGCAGACCAAAGCTTGTAGCTGGTTCTCCGGAAGGATTTCCTGGTCATGTTGATGGAAGGCCTCGAGAGGCCAGGATGAACCATCCAAAGGGATTTACGGTGGACGGCAGGGGTAACATTTATGTGGCTGATGCTATGAACATGGCTATTAGAAAGATCAGTGACACAGGGGTTACAACTATTGCTGGGGGGAAATCAAGCAGAGGAGGGCATGTTGATGGACCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAGTCCGCTATATTGGCAGTAGCTGCTCCCTTTTGGTGATTGACAGAGGAAACCAAGCGATTCGGGAGATTCAACTCAACTTCGATGACTGTGTATATCAGTATGAAGCTGGTTTTCCTCTAGGAGTTGCGGTGCTTCTTGCTGCTGCGTTCTTTGGCTACATGCTCGCGTTGCTCCAACGCAGGGTATTAGGGATGGTGTCAACAGAAGATGAACCTGAGACTCAGACTCCACTAAAAGCTAGCATTGCAAGCATCCCTCCATACCAGAAGCCGCTAAAACAATCTGTCCGTCCACCGTTAATCCCAAATGAGGATGAATCTGAGAAACAAGAGGTTGAAGAGGGGTTCTTTACCTCAATCGGTAAACTCATCGTGGGAGCCAAATCGTCTGTTGCAGAGATAGTTGGTGCAGCCTTTTCTAGAAAGAAGCGTTTAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTTCAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCAACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCCGTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGATCCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAACTGGTAGATGGCCAGATGTCCTTTTTTGCAGCTACATGATTAGATTTACTGCTCGTTAAGTTATTTTGCCGTCGTCGAATTTGTACTGCCTGAAACAGATAAATAGAAATTCAGGAAGTACCGGTGATATGGGCAAAGTCGAAAGCTGGTTTTTGCTGGATGAACGTCGTGATCTTAGACCTCTACTGATATATATATCTATGTAAATGGAATGTGTTT ] [+] EMBL AK058253 [ GTTGCTCCAACGCAGGGTATTAGGGATGGTGTCAACAGGAGATGAACCTGAGACTCAGACTCCACTAAAAGCTAGCATTGCAAGCATCCCTCCATACCAGAAGCCGCTAAAACAATCTGTCCGTCCACCGTTAATCCCAAATGAGGATGAATCTGAGAAACAAGAGGTTGAAGAGGGGTTCTTTACCTCAATCGGTAAACTCATCGTGGGAGCCAAATCGTCTGTTGCAGAGATAGTTGGTGCAGCCTTTTCTAGAAAGAAGCGTTTAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTTCAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCAACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCCGTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGATCCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAACTGGTAAATGGCCAGATGTCCTTTTTTGCAGCTACATGATTAGATTTACTGCTCGTTAAGTTATTTTGCCGTCGTCGAATTTGTACTGCCTGAAACAGATAAATAGAAATTCAGGAAGTACCGGTGATATGGGCAAAGTCGAAAGCTGGTTTTTGCTGGATGAACGTCGTGATCTTAGACCTCTACTGATATATATATCTATGCAAATGGAATGTGTTT ] [+] EMBL CA767366 [ TAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTTCAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCAACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCCGTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGATCCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAACTGGTAGATGGCCAGATGTCCTTTTTTGCAGCTACATGATTAGATTTACTGCTCGTTAAGTTATTTTGCCGTCGTCGAATTTGTACTGCCTGAAACAGATAAATAGAAATTCAGGTAGTACCGGTGATATGGGCAAAGTCGAAAGCTGGTTTTTGCTGGATGAACGTCGTGATCTTAGACCTCTACTGATATATATATCTATGTAAATGGAATGTGTTTTTT] consensusID : consensus_10289#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 99 fasta sequence [TACAGCATCATAGGCAGTATTCATCAGGACCGCAATCTTTCTATGATCCAAGCTGTGAGGCAACAAACTAGATTTTCTTTCTACCCTTTCAGGAGGTAG] [+] EMBL AA750785 [TACAGCATCATAGGCAGTATTCATCAGGACCGCAATCTTTCTATGATCCAAGCTGTGAGGCAACAAACTAGATTTTCTTTCTACCCTTTCAGGAGGTAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10289#1 ------------------------------------------------------------ consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ACTGTCTCACTCTCTCTTGCCCACATTTTTTTCCCCCGGAGAGCGACAACTGCAGGGCCC 60 consensus_10289#1 ------------------------------------------------------------ consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 AAAAAGAGGCCGGATTCTTTGGTGTTTTCTGAACCTTCTTTACTTGTCCTCAAATGGCCA 120 consensus_10289#1 ----------GAAAAGCTCGGATTCTTGGCGGTTTCCCCCACCATTTCCCCCTCCTCGAT 50 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CCTCTTCCTCCTCCTCCTCGCATTTCCTCCCATAGCTCGCATTCGCATTCGCATCGCACT 180 consensus_10289#1 CTGGGCCTCCTCCCCGCAA-GCGTGCGCCTCGCATTCCCACCGAGCGTGCCTA--CGTGC 107 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CACCCTCTCCTGCAAGCAAAGCTAAAGCTTCGGTTTGGTTATTTCCTTTCCTCGCCGCTT 240 consensus_10289#1 TGCGCTTTGCTGTGCTGCGGGAGGATGGAGGGTGGGGGGAGAGGCGGCGGCCCCGTGGTG 167 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 TTTTCTTTGCTTCTTGCGGTGGCCATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCC 300 consensus_10289#1 GCGGCGCTGCTGCTGGCCGCGCTCCTCCTCGCCGCC---GTCGCTCCGGCCTCCGCGTCG 224 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 GCGGCGGTTCTGGTGGCCGCGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCG 360 consensus_10289#1 TCGT---ACCCCGCAAAGGTGGTGAGTGGGTTCCTCTCCAACGCGGCGTCGTCGGTGATG 281 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 TCGTCTTACCCCGCGAAGGTGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTG 420 consensus_10289#1 AAGCGGCTGTGGTCGCTCAAATC---CACCACGAAGACAGGA--AGCGG----AGGGAAG 332 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 AAGCAGCTCTGGTCGCTCAAATCGACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGG 480 consensus_10289#1 TCGATGGTGAAGTACGAGGGCGGGTACACCGTGGAGACGGTCTTCGACGGGAGCAAGCTG 392 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 TCGATGGTGAAGTACGAGGGCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTG 540 consensus_10289#1 GGGATCGAGCCCTACGCGGTGGAGGTCACCCAGGGCGGCGAGCTGCTCGTCATGGACTCC 452 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 GGGATCGAGCCGCACGACGTCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCC 600 consensus_10289#1 ATGAACAGCAACATCTACAGGATCGCCCTGCCGCTGTCTCGATATAGCAGACCAAAGCTT 512 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ATGAACAGCAACGTCTACAGGGTCCAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTT 660 consensus_10289#1 GTAGCTGGTTCTCCGGAAGGATTTCCTGGTCATGTTGATGGAAGGCCTCGAGAGGCCAGG 572 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 GTTGCTGGTTCGCCGGAAGGATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAG 720 consensus_10289#1 ATGAACCATCCAAAGGGATTTACGGTGGACGGCAGGGGTAACATTTATGTGGCTGATGCT 632 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ATGAACCATCCGAAGGGATTTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCT 780 consensus_10289#1 ATGAACATGGCTATTAGAAAGATCAGTGACACAGGGGTTACAACTATTGCTGGGGGGAAA 692 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ATGAATATGGCAATAAGAAAGATCAGTGATACAGGGGTTACAACCATTGCTGGGGGGAAA 840 consensus_10289#1 TCAAGCAGAGGAGGGCATGTTGATGGACCAAGTGATGATGCAAAATTTTCTACTGATTTT 752 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 TCAATGAGAGGTGGGCACCTAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTT 900 consensus_10289#1 GAAGTCCGCTATATTGGCAGTAGCTGCTCCCTTTTGGTGATTGACAGAGGAAACCAAGCG 812 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 GAAATTCGCTACATCAGCAGTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCA 960 consensus_10289#1 ATTCGGGAGATTCAACTCAACTTCGATGACTGTGTATATCAGTATGAAGCTGGTTTTCCT 872 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ATTCGCGAGATTGCACTCCACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCA 1020 consensus_10289#1 CTAGGAGTTGCGGTGCTTCTTGCTGCTGCGTTCTTTGGCTACATGCTCGCGTTGCTCCAA 932 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CTAGGCATTGCATTGCTTTTTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAG 1080 consensus_10289#1 CGCAGGGTATTAGGGATGGTGTCAACAGAAGATGAACCTGAGACTCAGACTCCACTAAAA 992 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CGACAGGTTTTAGGGATGGTATCAACAGCAGATGAACCT------CAGACTCCTCCAAGA 1134 consensus_10289#1 GCTAGCATTGCAAGCATCCCTCCATACCAGAAGCCGCTAAAACAATCTGTCCGTCCACCG 1052 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CCCAGCATTGCAAGCATCCCTCCATATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCA 1194 consensus_10289#1 TTAATCCCAAATGAGGATGAATCTGAGAAACAAGAGGTTGAAGAGGGGTTCTTTACCTCA 1112 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CTGATCCCAACCGAAGATCAAGCTGGGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCA 1254 consensus_10289#1 ATCGGTAAACTCATCGTGGGAGCCAAATCGTCTGTTGCAGAGATAGTTGGTGCAGCCTTT 1172 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ATCGGCAAGCTCATCGGAGGAGCAAAATCATCTGCGGTAGAGATATTCTCACGAAAGAAA 1314 consensus_10289#1 TCTAGAAAGAAGCGTTTAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTT 1232 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CGCCCAACCCATCAGTACCATCATCACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTG 1374 consensus_10289#1 CAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCA 1292 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CAAGAAAGTTACGCCATCCCACATGATGAGACACCGCCACCATTGGACATGAGAGCAGCT 1434 consensus_10289#1 ACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGG 1352 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ACTCCTCGGAAGAACTACGCCTTCATGACGAAGGAGCCTGAAAAAGTTCACCATGTCCGC 1494 consensus_10289#1 CATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAACAG 1412 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CATGGCCGGCCTTACTTCAACGGCTGGGACATG---------CAGCATGCCCCTCAGCAA 1545 consensus_10289#1 CAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCA 1472 consensus_10289#2 ----------------------------------TACAGCATCATAGGCAGTATTCATCA 26 consensus_10289#0 CAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAGCAGCACAGGCAGTACTCCGCA 1605 * ***** ** ******** ** ** consensus_10289#1 GGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCC 1532 consensus_10289#2 GGACCGCAATCTTTCTATGATCCAAGCTGTGAGGCAACAAACTAGATTTTCTTTCTACCC 86 consensus_10289#0 GGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACAAACGAGATCGTCTTTGGTGCT 1665 ** ****** ******* ** * ***** *** * ****** **** ***** * consensus_10289#1 GTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGAT 1592 consensus_10289#2 TTTCAGGAGGTAG----------------------------------------------- 99 consensus_10289#0 GTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATCAAGGCCGTGAACTATGGGGAC 1725 * ******** * consensus_10289#1 CCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAAC 1652 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 ACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAATTACATCGGCTACAACAACAGC 1785 consensus_10289#1 TGGTAGATGGCCAGATGTCCTTTTTTGCAGCTACATGATTAGATTTACTGCTCGTTAAGT 1712 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 AGCAACGGCAACA-ACAACAGCTACTACTATTAAACAACCAACCCTTCTGCCCTCAATTT 1844 consensus_10289#1 TATTTTGCCGTCGTCGAATTTGTA-CTGCCTGAAACAGATAAATAGAAATTCAGGA---- 1767 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 TCCCCCTCTCTCTTTATCCCTGTTTCTTTCCTATATGATTAGATTTACCGCTCGCGTTTT 1904 consensus_10289#1 -AGTACCGGTGATATGGGCAAAGTC------GAAAGCTGGTTTTTGCTGGATGAACGTCG 1820 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 CGCTTCTCCTGACCTCCGCGACGCCTGTAACAAAAGAAAGAAAAAGCGGGGGGGAAGTAG 1964 consensus_10289#1 TGATCTTAGACCTCTACTGATAT-ATATATCTATGTAAATGGAATGTGTTTTTT------ 1873 consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 AGGCACTAATCTTCTTCAGTCCTGACCTGTGCAATGCAATGGCAAACACCTGGGGAGGGG 2024 consensus_10289#1 ------------------------------------------------------------ consensus_10289#2 ------------------------------------------------------------ consensus_10289#0 TTTTTGTACTACACCCTGATGATGATCAGACACTCTTACACTACCATCCTGTACATATAT 2084 consensus_10289#1 ----------------------- consensus_10289#2 ----------------------- consensus_10289#0 TTTGTTGTTCACCAGCTCAGCTG 2107 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||