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Oryza sativa
cluster # 10302 cluster # 10302       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10302#0 length = 1843 sequences # 7  

consensusID : consensus_10302#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1843
fasta sequence
                              [TGCAGAGGAGGACGAAGTGAGCCCCGGCCACCGCCCGCCGCCGCCGCCGCCATGGCGCTCCGCCGCATCAACCTCCGGAAGAAGCCGCTCCTCCTCTTCCCGCGGCCCTTCTCCTCGTCCTCCTCACCCAACCCTCCCTTCCCTCCTCCCCCGCCACCGCCCAACGACCGCGACGACGCCTCACCAAAGCCCAGCGAGGGGGAGGGGCGCAACCCGGCGGCCTCGCTCTTCCAGGACTTGCGCGACCGGCTCATGTCCACCCCCTCGCATCTGCCGTCGCGCCGGATCCCGACCGCTCCGCCGCCCCGCCCCTCGGGGAACGCCGAGCCGGTGGCCTCTATCGACGACATCCGCCGCCAGCTCGAGTCCTACCGCGGATCCCTCGCCGCGAGGGGCGCCCCTCCTGGCTCCTCCCCCGACGGCGCCGCCCCCTCCTTGCTCGACCTGGTGAGGAGCACCTCGTCCCCGACCTCACCTCAGGGCCCCAACTCCGGGCACTTCTCATCCCTCGCCGAGAGCTTGCGCAATCTCCCCTCTGGACGGCAGCCGCAACAGCGGAGGCAGCCTCGTTCGACAACCCCGTTTTTGTCCCCCACTGCGCATCCCATCTTCGGGAGGGAGCTCGGGGAGAACGCGAGAAAGGCGGAGGGGAAAGAGGAGAATTCTGCCATTGAGCTTAAGAAGGAATACAGCTACGCAGAGCTCGGGAAGAAGCTCGGCCAACTGCGACCGTCCGGCGCAGGGAACGATGGAAAGGAGTGGTTCTCGCTTGAGGAGCTGCAGGGACGGATCGCCAAGCTCGCAAATTTGGACATTGCTGATGACATGCGGTTAGGCGGGCAGTATGTGGCACTCCGGAAGAGCCTCCTGGGAATCCAAGCCGATCAGAAAACAAAGGATGATATTAAGAAGACAAGATCCATGCAGGGATTGTCATTTTTGGCGAACATTGGTGGGCCGGCAACGCCGCAATACTTGCAGCATCCTCCACAGGAGGAGTTGCTAGAGAGGTATTTCCATCCAGACCACATGTCGTCGGAAGAGAAGATGAAGTTAGAGCTCCAGAGGGTGAGGGACGAGTTTAAGATGTCTGAAAATGACTGTGGCTCTGCGCGAGTTCAAATTGCCCAATTGACCGTGAAAATCAAGCATCT-GTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT-TACAA-GA-ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT-TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATAACTTCTCTTAAAAAAAAAATCTGATTCCTTGTTATGGAGGTGATGCTGGGTGGCACCACCCAAGTTTTAATCCATAAGATTATAATTGTGTTTTTTAAAAAA]

[+] EMBL AK063404             [TGCAGAGGAGGACGAAGTGAGCCCCGGCCACCGCCCGCCGCCGCCGCCGCCATGGCGCTCCGCCGCATCAACCTCCGGAAGAAGCCGCTCCTCCTCTTCCCGCGGCCCTTCTCCTCGTCCTCCTCACCCAACCCTCCCTTCCCTCCTCCCCCGCCACCGCCCAACGACCGCGACGACGCCTCACCAAAGCCCAGCGAGGGGGAGGGGCGCAACCCGGCGGCCTCGCTCTTCCAGGACTTGCGCGACCGGCTCATGTCCACCCCCTCGCATCTGCCGTCGCGCCGGATCCCGACCGCTCCGCCGCCCCGCCCCTCGGGGAACGCCGAGCCGGTGGCCTCTATCGACGACATCCGCCGCCAGCTCGAGTCCTACCGCGGATCCCTCGCCGCGAGGGGCGCCCCTCCTGGCTCCTCCCCCGACGGCGCCGCCCCCTCCTTGCTCGACCTGGTGAGGAGCACCTCGTCCCCGACCTCACCTCAGGGCCCCAACTCCGGGCACTTCTCATCCCTCGCCGAGAGCTTGCGCAATCTCCCCTCTGGACGGCAGCCGCAACAGCGGAGGCAGCCTCGTTCGACAACCCCGTTTTTGTCCCCCACTGCGCATCCCATCTTCGGGAGGGAGCTCGGGGAGAACGCGAGAAAGGCGGAGGGGAAAGAGGAGAATTCTGCCATTGAGCTTAAGAAGGAATACAGCTACGCAGAGCTCGGGAAGAAGCTCGGCCAACTGCGACCGTCCGGCGCAGGGAACGATGGAAAGGAGTGGTTCTCGCTTGAGGAGCTGCAGGGACGGATCGCCAAGCTCGCAAATTTGGACATTGCTGATGACATGCGGTTAGGCGGGCAGTATGTGGCACTCCGGAAGAGCCTCCTGGGAATCCAAGCCGATCAGAAAACAAAGGATGATATTAAGAAGACAAGATCCATGCAGGGATTGTCATTTTTGGCGAACATTGGTGGGCCGGCAACGCCGCAATACTTGCAGCATCCTCCACAGGAGGAGTTGCTAGAGAGGTATTTCCATCCAGACCACATGTCGTCGGAAGAGAAGATGAAGTTAGAGCTCCAGAGGGTGAGGGACGAGTTTAAGATGTCTGAAAATGACTGTGGCTCTGCGCGAGTTCAAATTGCCCAATTGACCGTGAAAATCAAGCATCT GTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGG                                                                                                                              ]
[-] EMBL CB648117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAATTGCCCAATTGACCGTGAAAATCAAGCATCT GTCAACTGTTTTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTCCCTCAAGTCCCTGGGTAGAACTGACTGGGATTCATATTGTTTTGTCCTGTAGAAGCTGGGTTTTTGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCCCCAGTAAAGCCAAATTTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATTTGTAACCAAGATGGTTTTCACCTTTCCCTCCCTGGGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTTTGCTCGAAATGGGTTTGATCCATTTTTTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTTTCAGTGCTGTATTTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TTTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGGGTTTTTTTTATAGAGTTGAGTTTTCCCATTTTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATA                                                                                                      ]
[+] EMBL AU082477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGGCATCTGGCCAACTGTTCTACNCAAAAAGGATAACCATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGNAGGAAGAAGTNCCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATAACTTCTCTTAAAAAAAAAA                                                                                   ]
[+] EMBL AU065518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCT GTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGATTCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA GA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGNTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTTNTCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAAT CTAATAA                                                                                                     ]
[-] EMBL CB647460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACATTCGAGAAAGGGGCTTCAGGATATGGTCCAAAGGAGGAAAAAGTCCCTCAAGTCCCTGGGTAGAACTGACTGGGATTCATATTGTTTTGTCCTGTCGAAGCTGGGTTTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TCCAA GA ACAAATCCCCCCGTAAAGCCAAATTTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATTTGTAACCAAGATTGTTTTCCCCTTTCCCTCCCTGGGGCCTTGAATTGCATGGCCACCAAGGTTGATGATCGAAAATCCCGACGCTCTGCTCGAAAAGGGTTTGATCCATTTTTTCAGGGTTGCTCGAAAAGGGTTCGATCCAGTCTTTCAGTGCGGTATTTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TTTTATTTTTCATGAGAAGGGGCAGCCATCCTGTAACAGCTACATGGGTTTTTTTTATAGAGTTGAGTTTTCCCATTTTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATA                                                                                                      ]
[+] EMBL AA752429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgAGCTKGGTCTTCGTGATGTACCGGAGTACAAAGCTCCTGAT TACAA TA ACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCGAGAGCGAGAAAAGARAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATT                                                                                                                                                                                                                                                                       ]
[+] EMBL BQ906000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTACAAAGCTCCTGATNTACAATGAGACGAATCCACCAGTAAAGCCCAATCTAAGAAGAGCAAGAGCAAGAAAAGAAAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTGAACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTTGATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTTTTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCTTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAGAGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAATAACTTCTCTTATTCACTGTGTCTGATTCCTTGTTATGGAGGTGATGCTGGGTGGCACCACCCAAGTTTTAATCCATAAGATTATAATTGTGTTTTTTAAAAAA]


>consensus_10302#0 TGCAGAGGAGGACGAAGTGAGCCCCGGCCACCGCCCGCCGCCGCCGCCGCCATGGCGCTC CGCCGCATCAACCTCCGGAAGAAGCCGCTCCTCCTCTTCCCGCGGCCCTTCTCCTCGTCC TCCTCACCCAACCCTCCCTTCCCTCCTCCCCCGCCACCGCCCAACGACCGCGACGACGCC TCACCAAAGCCCAGCGAGGGGGAGGGGCGCAACCCGGCGGCCTCGCTCTTCCAGGACTTG CGCGACCGGCTCATGTCCACCCCCTCGCATCTGCCGTCGCGCCGGATCCCGACCGCTCCG CCGCCCCGCCCCTCGGGGAACGCCGAGCCGGTGGCCTCTATCGACGACATCCGCCGCCAG CTCGAGTCCTACCGCGGATCCCTCGCCGCGAGGGGCGCCCCTCCTGGCTCCTCCCCCGAC GGCGCCGCCCCCTCCTTGCTCGACCTGGTGAGGAGCACCTCGTCCCCGACCTCACCTCAG GGCCCCAACTCCGGGCACTTCTCATCCCTCGCCGAGAGCTTGCGCAATCTCCCCTCTGGA CGGCAGCCGCAACAGCGGAGGCAGCCTCGTTCGACAACCCCGTTTTTGTCCCCCACTGCG CATCCCATCTTCGGGAGGGAGCTCGGGGAGAACGCGAGAAAGGCGGAGGGGAAAGAGGAG AATTCTGCCATTGAGCTTAAGAAGGAATACAGCTACGCAGAGCTCGGGAAGAAGCTCGGC CAACTGCGACCGTCCGGCGCAGGGAACGATGGAAAGGAGTGGTTCTCGCTTGAGGAGCTG CAGGGACGGATCGCCAAGCTCGCAAATTTGGACATTGCTGATGACATGCGGTTAGGCGGG CAGTATGTGGCACTCCGGAAGAGCCTCCTGGGAATCCAAGCCGATCAGAAAACAAAGGAT GATATTAAGAAGACAAGATCCATGCAGGGATTGTCATTTTTGGCGAACATTGGTGGGCCG GCAACGCCGCAATACTTGCAGCATCCTCCACAGGAGGAGTTGCTAGAGAGGTATTTCCAT CCAGACCACATGTCGTCGGAAGAGAAGATGAAGTTAGAGCTCCAGAGGGTGAGGGACGAG TTTAAGATGTCTGAAAATGACTGTGGCTCTGCGCGAGTTCAAATTGCCCAATTGACCGTG AAAATCAAGCATCTGTCAACTGTTCTACACAAAAAGGATAAACATTCGAGAAAGGGGCTT CAGGATATGGTCCAAAGGAGGAAGAAGTACCTCAAGTACCTGCGTAGAACTGACTGGGAT TCATATTGTCTTGTCCTGTCGAAGCTGGGTCTTCGTGATGTACCGGAGTACAAAGCTCCT GATTACAAGAACAAATCCACCAGTAAAGCCAAATCTAAGAAGAGCAAGAGCAAGAAAAGA AAGATGAAAGCATAAATCTGTAACCAAGATCGTCTTCACCTCTCCCTCCCTGCGGCCTTG AACTGCATGGCCAGCAAGGTTGATGATCGAAAATACAGACGCTCTGCTCGAAATGGGTTT GATCCATTCTCTCAGTGTTGCTCGAAATGGGTTCGATCCAGTCTCTCAGTGCTGTATCTT TTGTAGTAATAACAACGGATTGTTAATCCCCTTCTCATTTTCCTTTTTGGTAGCAATGTT TCTTATTTTTCATGAGAAGGTGCAGCCATCCTGTAACAGCTACATGTGTTTTTTTTATAG AGTTGAGTTCTCCCATTCTACTTCCTGGGAGAACGGGATTGATCATTGATGAATACTAAT AACTTCTCTTAAAAAAAAAATCTGATTCCTTGTTATGGAGGTGATGCTGGGTGGCACCAC CCAAGTTTTAATCCATAAGATTATAATTGTGTTTTTTAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)