|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10305#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1458 fasta sequence
[TCTTTTTTTTTTAAACCATTGATCTCAAACATACATGTTCACAATAAACAAGT-ACAAGTTCCAACAAAAAGAATGCAGAAAAACATACAACAATCCATGGCTAGACAATGCCATGTGGGATTTTATTCTTGCTCTAGACGTAGAGTGGTAGAGTCAGTTCGACAGGACAACCATCAAGCTGAACAAGAGGCGAAGGAAATTAGGGGAGTTGCACAAATGGAATAGCACACACATAAAGGTCCTCCTTCCTCCTAGCAGTGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCCAGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATTAGCAAGTGCAAAATTCATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTGGTTGCCTTTGTGTTCTATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAAATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACGTCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGAGTGTGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTAGGCCCTCCTCAGTTACCTTCA-TTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCCTCGACATCACATCTGGGTTCCTCATCAGCTCTGCCATGGCCCATTGCAGCGTCGTTATTGGCGCCTCGCTCCCGCCTGCCAAAAGTTCAAAAATGATTGCTTTGATTATGCTGGTGGTAAGCTCGAACTCCAGGTTTCCTTCTGCTTGTAGCCGGAGGAGGACATCGATGAGGTCCTCCTCGCGGTCTCCTCCCTGACACGACCTCTTCTCAAGGTGCTCGCTGATGACGCGATCCATGAACTCCATGAGTGAGCGATATGAGCTGTGATTAGGATGACTCCCTGCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACGGCAGCAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCTGGCCATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGACGAAGCCCTAGCAACGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCAGCGTTCCCGGGGATCCAGTCGACGTTGACCCGATGGACGGAGGCGGCGTCGCCTTCTTTCCAGCCGGCGACGCTGGTGATCGAGGAAACCTCCCTCCCTCTCTCTCGGTT]
[+] EMBL CB618454 [TCTTTTTTTTTTAAACCATTGATCTCAAACATACATGTTCACAATAAACAAGT ACAAGTTCCAACAAAAAGAATGCAGAAAAACATACAACAATCCATGGCTAGACAATGCCATGTGGGATTTTATTCTTGCTCTAGACGTAGAGTGGTAGAGTCAGTTCGACAGGACAACCATCAAGCTGAACAAGAGGCGAAGGAAATTAGGGGAGTTGCACAAATGGAATAGCACACACATAAAGGTCCTCCTTCCTCCTAGCAGTGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCCAGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATTAGCAAGTGCAAAATTCATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTGGTTGCCTTTGTGTTCTATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAAATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACGTCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGAGTGTGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTAGGCCCTCCTCAGTTACCTTCA TTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCCTCGACATCACATCTGGGTTCCTCATCAG ]
[+] EMBL CB618414 [ ctctAACAAGTGAC AGTTCCAACAAAAAGAATGCAGAAAAACATACAACAATCCATGGCTAGACAATGCCATGCGGGATTTTATTCTTGCTCTAGACGTAGAGTGGTAGAGTCAGTTCGACAGGACAACCATCAAGCTGAACAAGAGGCGAAGGAAATTAGGGGAGTTGCACAAATGGAATAGCACACACATAAAGGTCCTCCTTCCTCCTAGCAGTGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCCAGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATTAGCAAGTGCAAAATTCATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTGGTTGCCTTTGTGTTCTATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAAATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACGTCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGAGTGTGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTAGGCCCTCCTCAGTTACCTTCA TTTTCTCCTTGTAGGCTTCCCTGACCTCCGCCTGTGCCCTCGACATCACATCct ]
[-] EMBL CB618453 [ GGTAGGTTAGTTAGGCCCTCCTCAGTTA CTTCATTTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCCTCGACATCACATCTGGGTTCCTCATCAGCTCTGCCATGGCCCATTGCAGCGTCGTTATTGGCGCCTCGCTCCCGCCTGCCAAAAGTTCAAAAATGATTGCTTTGATTATGCTGGTGGTAAGCTCGAACTCCAGGTTTCCTTCTGCTTGTAGCCGGAGGAGGACATCGATGAGGTCCTCCTCGCGGTCTCCTCCCTGACACGACCTCTTCTCAAGGTGCTCGCTGATGACGCGATCCATGAACTCCATGAGTGAGCGATATGAGCTGTGATTAGGATGACTCCCTGCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACGGCAGCAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCTGGCCATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGACGAAGCCCTAGCAACGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCAGCGTTCCCGGGGATCCAGTCGACGTTGACCCGATGGACGGAGGCGGCGTCGCCTTCTTTCCAGCCGGCGACGCTGGTGATCGAGGAAACCTCCCTCCCTCTCTCTCGGTT]
[-] EMBL CB618413 [ TGGGTTCCTCATCAGCTCTGCCATGGCCCATTGCAGCGTCGTTATTGGCGCCTCGCTCCCGCCTGCCAAAAGTTCAAAAATGATTGCTTTGATTATGCTGGTGGTAAGCTCGAACTCCAGGTTTCCTTCTGCTTGTAGCCGGAGGAGGACATCGATGAGGTCCTCCTCGCGGTCTCCTCCCTGACACGACCTCTTCTCAAGGTGCTCGCTGATGACGCGATCCATGAACTCCATGAGTGAGCGATATGAGCTGTGATTAGGATGACTCCCTGCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACGGCAGCAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCTGGCCATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGACGAAGCCCTAGCAACGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCAGCGTTCCCGGGGATCCAGTCGACGTTGACCCGATGGACGGAGGCGGCGTCGCCTTCTTTCCAGCCGGCGACGCTGGTGATCGAGGAAACCTCCCTCCCTCTATGGCGGTT]
consensusID : consensus_10305#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 850 fasta sequence
[GCAGTTCCGAGTGCATCCTATCCAATCCCCTCATCACAGCACACATGTGACCAAAGGTGGTGTCGTTCTCGCCGGCTGTCGGACGGAAAGTACTGACATCATCACCGCTGGCTCGACAAGGGTGAAATCGGTACGCCGTGTCGTGGAAGATGTAGTTGTGGCGCTCCCGTAGTCTGGCCATCATCAGGTATGCTGCCTCCTGACAGGCGTGATCTGCTGTGCCTCCGGATGCCTCAACCACCATATTAGCTAGGCAGGTACCCACGTAGCCGTGGACCTCCAGGCGAACACGGTGAGGAAGCTCGCCACTGAGCGGTGGAACAGTCGTGTACTCTGGCGCGTTGGGGTAGCCCACCACCAGCGTCATACGTGCCAACTCTGCCATAAAGTCAATCATGCCTTCTCCGCGGTGGTTGGGTGGGTGGCCGGCCATCTTGCTCTGTTGCTGGAGGAACCTCGATGACTATTTCGAAGTACACCGGAGCGTCGGAGGAACCGGAATCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACCGCAACAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGTGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGAAGAAGCCCTAGCAACGGTGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCAGCGTTCCCGGGGATCCACT]
[-] EMBL CB683965 [GCAGTTCCGAGTGCATCCTATCCAATCCCCTCATCACAGCACACATGTGACCAAAGGTGGTGTCGTTCTCGCCGGCTGTCGGACGGAAAGTACTGACATCATCACCGCTGGCTCGACAAGGGTGAAATCGGTACGCCGTGTCGTGGAAGATGTAGTTGTGGCGCTCCCGTAGTCTGGCCATCATCAGGTATGCTGCCTCCTGACAGGCGTGATCTGCTGTGCCTCCGGATGCCTCAACCACCATATTAGCTAGGCAGGTACCCACGTAGCCGTGGACCTCCAGGCGAACACGGTGAGGAAGCTCGCCACTGAGCGGTGGAACAGTCGTGTACTCTGGCGCGTTGGGGTAGCCCACCACCAGCGTCATACGTGCCAACTCTGCCATAAAGTCAATCATGCCTTCTCCGCGGTGGTTGGGTGGGTGGCCGGCCATCTTGCTCTGTTGCTGGAGGAACCTCGATGACTATTTCGAAGTACACCGGAGCGTCGGAGGAACCGGAATCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACCGCAACAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGTGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGAAGAAGCCCTAGCAACGGTGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCAGCGTTCCCGGGGATCCACT]
consensusID : consensus_10305#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 789 fasta sequence
[CTGGGGCTCAGCAGCTCAAGGCTGCAGATCTTCCGCACCTGCCGCCAGTGCTCGCCGTAGGGCACGAACGTCATCCCCGCGCCATACCTGGTGCAGACCTTCAGCACGGTGCTCAGTGGCCGCGTGGAGAAGTTGTCGTCGTGCGTCCTCATGATCTCTCTAGCCGCAATGGCCGTGGACGCGATAACCACCGGAGACGCCTGGCCAAAGCTGAGGAGCATGAGGGGGCCATGGAGGCGAGCCAGGTCGCGCAGCGCGTGGTGCGGGAGCGTGCGGCCGAACAGGTGGTGGAGGCTGCCGATGAGCGGGAGCCGCCATGGCCCAGGAGGTAGCCGAAGGTCGCTCTCGCGTGAGCCATGGAAGAGCGTGAGGAGGCAGTATACAAGAGGAAGAAGAGCTAGCAAACAGCACAGATCAGCGGTCTCCATGAGTGAGCGATATGAGCTGTGATTAGGATGACTCCCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACGGCAGCAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGACGAAGCCCTAGCAACGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCA]
[-] EMBL CB630678 [CTGGGGCTCAGCAGCTCAAGGCTGCAGATCTTCCGCACCTGCCGCCAGTGCTCGCCGTAGGGCACGAACGTCATCCCCGCGCCATACCTGGTGCAGACCTTCAGCACGGTGCTCAGTGGCCGCGTGGAGAAGTTGTCGTCGTGCGTCCTCATGATCTCTCTAGCCGCAATGGCCGTGGACGCGATAACCACCGGAGACGCCTGGCCAAAGCTGAGGAGCATGAGGGGGCCATGGAGGCGAGCCAGGTCGCGCAGCGCGTGGTGCGGGAGCGTGCGGCCGAACAGGTGGTGGAGGCTGCCGATGAGCGGGAGCCGCCATGGCCCAGGAGGTAGCCGAAGGTCGCTCTCGCGTGAGCCATGGAAGAGCGTGAGGAGGCAGTATACAAGAGGAAGAAGAGCTAGCAAACAGCACAGATCAGCGGTCTCCATGAGTGAGCGATATGAGCTGTGATTAGGATGACTCCCGGTCAGAAGCATGGTGTTTGCGAGGCTTGGACGGCAGCAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATGGAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGCTCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGCAGCACAGGGAAGCGGCAACGACGAAGCCCTAGCAACGGTGCGGTGGCGCGGCCGTGCTCCGGGGCTCCATGGCGCGGCA]
consensusID : consensus_10305#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 765 fasta sequence
[CTTATAAATTTTTTTTTTTTACTCCTTAGATAAAACCATTCATCTCAAACATACATGTTCACAATAAACAAGTACAAGTTCCAACAAAAAGAATGCAGAAAAACATACAACAATCCATGGCTAGACAATGCCATGTGGGATTTTATTCTTGCTCTAAACGTAAAGTGGTAAAGTCAGTTCGACAGGACAACCATCAAGCTGAACAAGAGGCGAAGGAAATTAGGGGAGTTGCACAAATGGAATAGCACACACATAAAGGTCCTCCTTCCTCCTAGCAGTGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCCAGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATTAGCAAGTGCAAAATTCATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTGGTTGCCTTTGTGTTCTATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAAATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACGTCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGAGTGTGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTAGGCCCTCCTCAGTTACCTTCATTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCCTCGACATCACATCTGG]
[+] EMBL CB630679 [CTTATAAATTTTTTTTTTTTACTCCTTAGATAAAACCATTCATCTCAAACATACATGTTCACAATAAACAAGTACAAGTTCCAACAAAAAGAATGCAGAAAAACATACAACAATCCATGGCTAGACAATGCCATGTGGGATTTTATTCTTGCTCTAAACGTAAAGTGGTAAAGTCAGTTCGACAGGACAACCATCAAGCTGAACAAGAGGCGAAGGAAATTAGGGGAGTTGCACAAATGGAATAGCACACACATAAAGGTCCTCCTTCCTCCTAGCAGTGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCCAGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATTAGCAAGTGCAAAATTCATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTGGTTGCCTTTGTGTTCTATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAAATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACGTCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGAGTGTGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTAGGCCCTCCTCAGTTACCTTCATTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCCTCGACATCACATCTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10305#0 ------------------------------------------------------------
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ----------GCAGTTCCGAG-TGCATCCTATCCAATCCCCTCATCACAGCACACATGTG 49
consensus_10305#2 CTGGGGCTCAGCAGCTCAAGGCTGCAGATCTTCCGCACCTGCCGCCAGTGCTCGCCGTAG 60
consensus_10305#0 ---------------------TCTTTTTTTTTTAAACCATTGATCTCAAACATACATGTT 39
consensus_10305#3 CTTATAAATTTT-TTTTTTTTACTCCTTAGATAAAACCATTCATCTCAAACATACATGTT 59
consensus_10305#1 ACCAAAGGTGGTGTCGTTCTCGCCGGCTGTCGGACGGAAAGTACTGACATCATCACCGCT 109
consensus_10305#2 GGCACGAACG---TCATCCCCGCGCCATACCTGGTGCAGACCTTCAGCACGGTGCTCAGT 117
* * * * *
consensus_10305#0 CACAATAAACAAGTACAAGTTCCA-ACAAAAAGAATGCAGAAAAACATACAACAATC-CA 97
consensus_10305#3 CACAATAAACAAGTACAAGTTCCA-ACAAAAAGAATGCAGAAAAACATACAACAATC-CA 117
consensus_10305#1 GGCTCGACAAGGGTGAAATCGGTACGCCGTGTCGTGGAAGATGTAGTTGTGGCGCTCCCG 169
consensus_10305#2 GGCCGCGTGGAGAAGTTGTCGTCGTGCGTCCTCATGATCTCTCTAGCCGCAATGGCCGTG 177
* * * *
consensus_10305#0 TGGCTAGACAATGCCATGTGGGATTTTATTCTTGCTCTAGACGTAGAGTGGTAGA-GTCA 156
consensus_10305#3 TGGCTAGACAATGCCATGTGGGATTTTATTCTTGCTCTAAACGTAAAGTGGTAAA-GTCA 176
consensus_10305#1 TAGTCTGGCCAT--CATCAGGTATGCTGC-CTCCTGACAGGCGTGATCTGCTGTGCCTCC 226
consensus_10305#2 -GACGCGATAAC--CACCGGAGACGC-----------CTGGCCAAAGCTGAGGAGCATGA 223
* * ** * * * ** *
consensus_10305#0 GTTCGACAGGACAACCAT-CAAGCTGAACAAGAGGCGAAGGAAATTAGGGG-----AGTT 210
consensus_10305#3 GTTCGACAGGACAACCAT-CAAGCTGAACAAGAGGCGAAGGAAATTAGGGG-----AGTT 230
consensus_10305#1 GGATGCCTCAACCACCATATTAGCTAGGCAGGTACCCACGTAGC-CGTGGACCTCCAGGC 285
consensus_10305#2 GGGGGCCATGGAGGCGAGCCAGGTCGCGCAG-----CGCGTGGTGCGGGAGCGTGCGGCC 278
* * * * * * ** * * *
consensus_10305#0 GCACA-AATGGAATAGCACACACATAAA------GGTCCTCCTTCCTCCTAGCA-----G 258
consensus_10305#3 GCACA-AATGGAATAGCACACACATAAA------GGTCCTCCTTCCTCCTAGCA-----G 278
consensus_10305#1 GAACACGGTGAGGAAGCTCGCCACTGAGCGGTGGAACAGTCGTGTACTCTGGCGCGTTGG 345
consensus_10305#2 GAACA-GGTGGTGGAGGCTGCCGATGAGCGG--GAGCCGCCATG-GCCCAGG-------A 327
* *** ** ** * * * * * * *
consensus_10305#0 TGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCC 318
consensus_10305#3 TGAGGCCCATAGTTTCCGTCATGTCCAAATCGCCGGGGAGAACGTCTTCCGGAAGACTCC 338
consensus_10305#1 GGTAGCCCACCACCAGCGTCATACGTGCCAACTCTGCCATAAAGTCAATCATGCCTTCTC 405
consensus_10305#2 GGTAGCCGAAGGTCGCTCTCGCGTGAGCCA----TGGAAGAGCGTGAGGAG--------- 374
* *** * ** * * * **
consensus_10305#0 AGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATT-AGCAAGTGCAAAATTC 377
consensus_10305#3 AGTCAAAATAAAACAGAAGACTTGCGAGAGCAAGCTCCATATT-AGCAAGTGCAAAATTC 397
consensus_10305#1 CGCGGTGGTTGGGTGGGTGGCCGGCCATCTTGCTCTGTTGCTGGAGGAACCTCGATGACT 465
consensus_10305#2 -GCAGTATACAAGAGGAAGAAGAGCTAGCAAACAGCACAGATC-AGCGGTCTCCATGAGT 432
* * * ** * * ** * *
consensus_10305#0 ATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTG-GTTGCCTTT 436
consensus_10305#3 ATTCCAGGGCAAATTCTTCGCCCAGCACCAAACGGTATGAACTCGAAGTG-GTTGCCTTT 456
consensus_10305#1 ATTTCGAAGTACAC-CGGAGCGTCGGAGGAACCGGAATCGGTCAGAAGCATGGTGTTTGC 524
consensus_10305#2 GAG-CGATATGAGC-TGTGAT-TAGGATGACTC----CCGGTCAGAAGCATGGTGTTTGC 485
* * * * * **** * ** *
consensus_10305#0 GTGTTCT--ATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAA 494
consensus_10305#3 GTGTTCT--ATTGCACTACCCTCAAACCTATCTGGCATGAACTTCTCTGGTTCATCCCAA 514
consensus_10305#1 GAGGCTTGGACCGCAACAGCAGCTTGCGGAAC-GGCTTGGAGTCGAT--GTCGATGGAGA 581
consensus_10305#2 GAGGCTTGGACGGCAGCAGCAGCTTGCGGAAC-GGCTTGGAGTCGAT--GTCGATGGAGA 542
* * * * *** * * * * * * *** ** * * ** ** *
consensus_10305#0 ATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACG 554
consensus_10305#3 ATCTCAGCGTCCCTGCAAATAGCCCATATATTCACGACTACAGTAGCTCTCTTGGGTACG 574
consensus_10305#1 GCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCGAGTCGACGGG 641
consensus_10305#2 GCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCGAGTCGACGGG 602
** ***** * ** ** * * * ** ** * * *
consensus_10305#0 TCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGA 614
consensus_10305#3 TCATAGCCGAGTATTTGACATTGCTCTTGGCATTCCCTTGGTAGAACAAATGGCCCAGGA 634
consensus_10305#1 GTTCGGCCGAG-GCCGGGAAAGACGATGGACGTTCTCCTTCTACAA-AGCTCGTATTGGG 699
consensus_10305#2 GTTCGGCCGAG-GCCGGGAAAGACGATGGACGTTCTCCTTCTACAA-AGCTCGTATTGGG 660
****** * * * * * * *** * * ** ** * * * **
consensus_10305#0 GTG-----TGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTA 669
consensus_10305#3 GTG-----TGGAGCCGCAGGGTCTCCTTGATGATACAATGTAGATAGGGTAGGTTAGTTA 689
consensus_10305#1 GTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGTGAAGCTTTTGGCGCAGCACAGGGA 759
consensus_10305#2 GTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGCAGCACAGGGA 720
*** *** * * * * ** ** * * * * * ** ** *
consensus_10305#0 GGCCCTCCTCAGTTACCTTCATTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCC 729
consensus_10305#3 GGCCCTCCTCAGTTACCTTCATTTTCTCCTTGTAGGCTTCCCTGACCTCGGCCTGTGCCC 749
consensus_10305#1 AGCGGCAACGAAGAAGCCCTAGCAACGG-TGGTGCGGTGGCGCGGCCGTGCTCCGGGGC- 817
consensus_10305#2 AGCGGCAACGACGAAGCCCTAGCAACGG-TG---CGGTGGCGCGGCCGTGCTCCGGGGC- 775
** * * * * * * * * * * ** * * * * *
consensus_10305#0 TCGACATCACATCTGGGTTCCTCATCAGCTCTGCCATGGCCCATTGCAGCGTCGTTATTG 789
consensus_10305#3 TCGACATCACATCTGG-------------------------------------------- 765
consensus_10305#1 TCCATGGCGCGGCAGCGTTCCCGGGGATCCACT--------------------------- 850
consensus_10305#2 TCCATGGCGCGGCA---------------------------------------------- 789
** * * * *
consensus_10305#0 GCGCCTCGCTCCCGCCTGCCAAAAGTTCAAAAATGATTGCTTTGATTATGCTGGTGGTAA 849
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 GCTCGAACTCCAGGTTTCCTTCTGCTTGTAGCCGGAGGAGGACATCGATGAGGTCCTCCT 909
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 CGCGGTCTCCTCCCTGACACGACCTCTTCTCAAGGTGCTCGCTGATGACGCGATCCATGA 969
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 ACTCCATGAGTGAGCGATATGAGCTGTGATTAGGATGACTCCCTGCGGTCAGAAGCATGG 1029
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 TGTTTGCGAGGCTTGGACGGCAGCAGCAGCTTGCGGAACGGCTTGGAGTCGATGTCGATG 1089
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 GAGAGCTTCGGCGTCACGGCGAAGTCGACGACGGCCGAGTATGGAGAGAGATCTGGCCAT 1149
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 CGAGTCGACGGGGTTCGGCCGAGGCCGGGAAAGACGATGGACGTTCTCCTTCTACAAAGC 1209
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 TCGTATTGGGGTGATTCTTGGGGTGTTTAGCTGAGGTCGAGGAGGCGAAGCTTTTGGCGC 1269
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 AGCACAGGGAAGCGGCAACGACGAAGCCCTAGCAACGGTGCGGTGGCGCGGCCGTGCTCC 1329
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 GGGGCTCCATGGCGCGGCAGCGTTCCCGGGGATCCAGTCGACGTTGACCCGATGGACGGA 1389
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 GGCGGCGTCGCCTTCTTTCCAGCCGGCGACGCTGGTGATCGAGGAAACCTCCCTCCCTCT 1449
consensus_10305#3 ------------------------------------------------------------
consensus_10305#1 ------------------------------------------------------------
consensus_10305#2 ------------------------------------------------------------
consensus_10305#0 CTCTCGGTT 1458
consensus_10305#3 ---------
consensus_10305#1 ---------
consensus_10305#2 ---------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||