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Oryza sativa
cluster # 10318 cluster # 10318       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10318#0 length = 1799 sequences # 6  
consensus_10318#1 length = 558 sequences # 1  

consensusID : consensus_10318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1799
fasta sequence
                              [CAAAGCTAAACCACCCTTTCCCTCCTCCTCCTCCTCCTCCCTCCCTCCCCCGTCTTCTCCTACCATCGCCCCGAAACAAATCCCCAATCCCTCAATCGCCGCCGCGATGCCACCACTCCACCGCCGCCTCGTTCTCTGCTTCCTCATCCTCGCCGCCGCCGCCGCCGCTACCACCGCTGCCTCCATCTCCACCCCCGCCGAGCTCGCGGTCGCGTCGCACCCTCTGTCCCCCCTCCGTCTCCCGCCGGCCGCGCCCTTCGCCGGCGGCGGGGAGGGCGGCGGCGGTGGCGGTGGCCCCTTCTGCACACGCGTGCATATCCGCGGTCGCCCGTCCCGCCTCCGCGACCCGTCGCGCTTCTTCCACGCCCTCAGGGTCCGCGCCAACGCTACCCGCCCCAGCGGACTTGAGCTCTGCTTTCACCGGAATGCCACAGTGGGTCCATGCAAGTGCGCGGCGTCACAGTGCCATAAGATGGCCAAGAGCGGCCTATGGGTGCAAGCCATCTCCCCGTACGACACCCGGGTCCTCGATTTCCGGATGCCATCGGACCCTTCGAGGTCTATCATAGTGTCGACGGAGGAAGAGTTCTTGCTTCACAGGGTGGTGTTCTTGTTGCTGGGAATGGTGCTGATGGCAGTGGCGCACACTCTTAGCGAGTCTGTGGTATTCTACTATGGCGGAGCAATGACGATTGGAATTTTCCTTGTAATTCTGATTATACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGTGTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGTCGGGACTTTTACGTTCTGTGCTTGTGGAAATTGGGATTGCCGAAGACATGCATAATCCTCTAGGTGTATTCCTTCTCGTAAGTGTGATCTTAGCTGGAGCCTGGTTTGGTTACTGGGGTGTCCGTAAGCTTGTGCTAACAGAAGAAGGATCTGTTGATGCTGGTGTGGCTTATTTTGTTGAGTGGGCTATCTTGATTATTTCTGCAGTTATGATCCTGCAGAGTTCTTTGGACTATCTCTTTGCATTTTCAGCATTATTATTTTGCACAGCCATCAAAGCAGTTTCTAGGATTGAGGGAAAGTCAAGAGTTCTACGGTGCCTATCAAGGGCATTTTCGAACATTGTTCCCACTGGCTATGAAGGTTTTGGTGAGGAGTACTCCAGCATGAATGGATCTCACCAAGATGGATTTAGCAAGCTTCATGGTGAATACATGAGGAGTACACCAAAAAGAAATTCACTTCGATCAAGGAAGACATTGTCTCAAGACCTTGCTACGGATAGCTACTATTCTACCTTCCACACTAACCCTGAGCGGAAAAAGTTTTCAGAGGAGGAATATGCAGCATTCACTAGAGAAGAGACACATAAAGCTATGAAACAACTGGTCTCATCGCCTGATTTCAACAGGTGGGCACTAGCAAACGTGGACAGGATATCTGTGACTCCTCCACAAAGAACACCCCAAAATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTTAAGCTGTGTGTGATATCTTCCATCTAGTAATCTGGTTTCAATTGCCAATCAATAGATTTGAGCTGTATATCAGTTTTTCTTCCTGGTAGTGGTATCTTCAGTGTGCTTGCAGCGGTAGGTATTCAATGTATATGAATTGAGTGGTAGCTAGCAGCTGTAACAATGGTGTATTTGCTTGTGGAAGCGAATCTGTAGTAGCTGTAACGATGGCGTATTTACTTTTGTGGAAGCAAAAAAAAA]

[+] EMBL AK068917             [CAAAGCTAAACCACCCTTTCCCTCCTCCTCCTCCTCCTCCCTCCCTCCCCCGTCTTCTCCTACCATCGCCCCGAAACAAATCCCCAATCCCTCAATCGCCGCCGCGATGCCACCACTCCACCGCCGCCTCGTTCTCTGCTTCCTCATCCTCGCCGCCGCCGCCGCCGCTACCACCGCTGCCTCCATCTCCACCCCCGCCGAGCTCGCGGTCGCGTCGCACCCTCTGTCCCCCCTCCGTCTCCCGCCGGCCGCGCCCTTCGCCGGCGGCGGGGAGGGCGGCGGCGGTGGCGGTGGCCCCTTCTGCACACGCGTGCATATCCGCGGTCGCCCGTCCCGCCTCCGCGACCCGTCGCGCTTCTTCCACGCCCTCAGGGTCCGCGCCAACGCTACCCGCCCCAGCGGACTTGAGCTCTGCTTTCACCGGAATGCCACAGTGGGTCCATGCAAGTGCGCGGCGTCACAGTGCCATAAGATGGCCAAGAGCGGCCTATGGGTGCAAGCCATCTCCCCGTACGACACCCGGGTCCTCGATTTCCGGATGCCATCGGACCCTTCGAGGTCTATCATAGTGTCGACGGAGGAAGAGTTCTTGCTTCACAGGGTGGTGTTCTTGTTGCTGGGAATGGTGCTGATGGCAGTGGCGCACACTCTTAGCGAGTCTGTGGTATTCTACTATGGCGGAGCAATGACGATTGGAATTTTCCTTGTAATTCTGATTATACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGTGTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGTCGGGACTTTTACGTTCTGTGCTTGTGGAAATTGGGATTGCCGAAGACATGCATAATCCTCTAGGTGTATTCCTTCTCGTAAGTGTGATCTTAGCTGGAGCCTGGTTTGGTTACTGGGGTGTCCGTAAGCTTGTGCTAACAGAAGAAGGATCTGTTGATGCTGGTGTGGCTTATTTTGTTGAGTGGGCTATCTTGATTATTTCTGCAGTTATGATCCTGCAGAGTTCTTTGGACTATCTCTTTGCATTTTCAGCATTATTATTTTGCACAGCCATCAAAGCAGTTTCTAGGATTGAGGGAAAGTCAAGAGTTCTACGGTGCCTATCAAGGGCATTTTCGAACATTGTTCCCACTGGCTATGAAGGTTTTGGTGAGGAGTACTCCAGCATGAATGGATCTCACCAAGATGGATTTAGCAAGCTTCATGGTGAATACATGAGGAGTACACCAAAAAGAAATTCACTTCGATCAAGGAAGACATTGTCTCAAGACCTTGCTACGGATAGCTACTATTCTACCTTCCACACTAACCCTGAGCGGAAAAAGTTTTCAGAGGAGGAATATGCAGCATTCACTAGAGAAGAGACACATAAAGCTATGAAACAACTGGTCTCATCGCCTGATTTCAACAGGTGGGCACTAGCAAACGTGGACAGGATATCTGTGACTCCTCCACAAAGAACACCCCAAAATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTTAAGCTGTGTGTGATATCTTCCATCTAGTAATCTGGTTTCAATTGCCAATCAATAGATTTGAGCTGTATATCAGTTTTTCTTCCTGGTAGTGGTATCTTCAGTGTGCTTGCAGCGGTAGGTATTCAATGTATATGAATTGAGTGGTAGCTAGCAGCTGTAACAATGGTGTATTTGCTTGTGGAAGCGAATCTGTAGTAGCTGTAACGATGGCGTATTTACTTTTGTGGAAGCAA       ]
[+] EMBL CB672470             [                                                                              AATCCCCAATCCCTCAATCGCCGCCGCGATGCCACCACTCCACCGCCGCCTCGTTCTCTGCTTCCTCATCCTCGCCGCCGCCGCCGCCGCTACCACCGCTGCCTCCATCTCCACCCCCGCCGAGCTCGCGGTCGCGTCGCACCCTCTGTCCCCCCTCCGTCTCCCGCCGGCCGCGCCCTTCGCCGGCGGCGGGGAGGGCGGCGGCGGTGGCGGTGGCCCCTTCTGCACACGCGTGCATATCCGCGGTCGCCCGTCCCGCCTCCGCGACCCGTCGCGCTTCTTCCACGCCCTCAGGGTCCGCGCCAACGCTACCCGCCCCAGCGGACTTGAGCTCTGCTTTCACCGGAATGCCACAGTGGGTCCATGCAAGTGCGCGGCGTCACAGTGCCATAAGATGGCCAAGAGCGGCCTATGGGTGCAAGCCATCTCCCCGTACGACACCCGGGTCCTCGATTTCCGGATGCCATCGGACCCTTCGAGGTCTATCATAGTGTCGACGGAGGAAGAGTTCTTGCTTCACAGGGTGGTGTTCTTGTTGCTGGGAATGGTGCTGATGGCAGTGGCGCACACTCTTAGCGAGTCTGTGGTATTCTACTATGGCGGAGCAATGACGATTGGAATTTTCCTTGTAATTCTGATTATACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGTGTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB658740             [                                                                                                                                                                                                                                                                                                                                                        ACTCGTCGCGCTTCTTCCACGCCCTCAGGGTCCGCGCCAACGCTACCCGCCCCAGCGGACTTGAGCTCTGCTTTCACCGGAATGCCACAGTGGGTCCATGCAAGTGCGCGGCGTCACAGTGCCATAAGATGGCCAAGAGCGGCCTATGGGTGCAAGCCATCTCCCCGTACGACACCCGGGTCCTCGATTTCCGGATGCCATCGGACCCTTCGAGGTCTATCATAGTGTCGACGGAGGAAGAGTTCTTGCTTCACAAGGTGGTGTTCTTGTTGCTGGGAATGGTGCTGATGGCAGTGGCGCACACTCTTAGCGAGTCTGTGGTATTCTACTATGGCGGAGCAATGACGATTGGAATTTTCCTTGTAATTCTGATTATACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGTGTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGTCGGGACTTTTACGTTCTGTGCTTGTGGAAATTGGGATTGCCGAAGACATGCATAATCCTCTAGGTGTATTCCTTCTCGTAAGTGTGATCTTAGCTGGAGCCTGGTTTGGTTACTGGGGTGTCCGTAAGCTTGTGCTAACAGAAGAAGGATCTGTTGATGCTGGTGTGGCTTATTTTGATGAGTGGGCTATCTTGATTATTTCTGCAATTATGATCCTGCAGAGTTCTTTGGACTATCTCTTTGCATTTTCAACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C26284               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTTCCTTGTAATTCTGATTATACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGTGTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGTCGGGACTTTTACGTTCTGTGCTTGTGGAAATTGGGATTGCCGAAGACATGCATAATCCTCTAGGTGTATTCCTTCTCGTAAGTGTGATCTTAGCTGGAGCCTGGTTTGGTTACTGGGGTGTCCGTAAGCTTGTGCTAACAGAAGAAGGATCTGTTGATGCTGGTGTGGCTTATTTTGTTGAGTGGGCTATCTTGATTATTTCTGCAGTTATGATCCTGCAGAGTTCTTTng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB672471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCCTGCAGAGTTCTTTGGACTATCTCTTTGCATTTTCAGCATTATTATTTTGCACAGCCATCAAAGCAGTTTCTAGGATTGAGGGAAAGTCAAGAGTTCTACGGTGCCTATCAAGGGCATTTTCGAACATTGTTCCCACTGGCTATGAAGGTTTTGGTGAGGAGTACTCCAGCATGAATGGATCTCACCAAGATGGATTTAGCAAGCTTCATGGTGAATACATGAGGAGTACACCAAAAAGAAATTCACTTCGATCAAGGAAGACATTGTCTCAAGACCTTGCTACGGATAGCTACTATTCTACCTTCCACACTAACCCTGAGCGGAAAAAGTTTTCAGAGGAGGAATATGCAGCATTCACTAGAGAAGAGACACATAAAGCTATGAAACAACTGGTCTCATCGCCTGATTTCAACAGGTGGGCACTAGCAAACGTGGACAGGATATCTGTGACTCCTCCACAAAGAACACCCCAAAATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTTAAGCTGTGTGTGATATCTTCCATCTAGTAATCTGGTTTCAATTGCCAATCAATAGATTTGAGCTGTATATCAGTTTTTCTTCCTGGTAGTGGTATCTTCAGTGTGCTTGCAGCGGTAGGTATTCAATGTATATGAATTGAGTGGTAGCTAGCAGCTGTAACAATGGTGTATTTGCTTGTGGAAGCGAATCTGTATTAGAGGGAACGATGGCGT                           ]
[+] EMBL AU108244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGTGA TCCTCCACAAAGAACACCCCAAAATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTTAAGCTGTGTGTGATATCTTCCATCTAGTAATCTGGTTTCAATTGCCAATCAATAGATTTGAGCTGTATATCAGTTTTTCTTCCTGGTAGTGGTATCTTCAGTGTGCTTGCAGCGGTAGGTATTCAATGTATATGAATTGAGTGGTAGCTANCAGCTGTANCAATGGTGTATTTGCTTGTGGAAGCGAATCTGTAGTAGCTGTAACGATGGCGTATTTACTTTTGTGGAAAAAAAAAAAAA]


>consensus_10318#0 CAAAGCTAAACCACCCTTTCCCTCCTCCTCCTCCTCCTCCCTCCCTCCCCCGTCTTCTCC TACCATCGCCCCGAAACAAATCCCCAATCCCTCAATCGCCGCCGCGATGCCACCACTCCA CCGCCGCCTCGTTCTCTGCTTCCTCATCCTCGCCGCCGCCGCCGCCGCTACCACCGCTGC CTCCATCTCCACCCCCGCCGAGCTCGCGGTCGCGTCGCACCCTCTGTCCCCCCTCCGTCT CCCGCCGGCCGCGCCCTTCGCCGGCGGCGGGGAGGGCGGCGGCGGTGGCGGTGGCCCCTT CTGCACACGCGTGCATATCCGCGGTCGCCCGTCCCGCCTCCGCGACCCGTCGCGCTTCTT CCACGCCCTCAGGGTCCGCGCCAACGCTACCCGCCCCAGCGGACTTGAGCTCTGCTTTCA CCGGAATGCCACAGTGGGTCCATGCAAGTGCGCGGCGTCACAGTGCCATAAGATGGCCAA GAGCGGCCTATGGGTGCAAGCCATCTCCCCGTACGACACCCGGGTCCTCGATTTCCGGAT GCCATCGGACCCTTCGAGGTCTATCATAGTGTCGACGGAGGAAGAGTTCTTGCTTCACAG GGTGGTGTTCTTGTTGCTGGGAATGGTGCTGATGGCAGTGGCGCACACTCTTAGCGAGTC TGTGGTATTCTACTATGGCGGAGCAATGACGATTGGAATTTTCCTTGTAATTCTGATTAT ACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGT GTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGTCGGGACTTTTACG TTCTGTGCTTGTGGAAATTGGGATTGCCGAAGACATGCATAATCCTCTAGGTGTATTCCT TCTCGTAAGTGTGATCTTAGCTGGAGCCTGGTTTGGTTACTGGGGTGTCCGTAAGCTTGT GCTAACAGAAGAAGGATCTGTTGATGCTGGTGTGGCTTATTTTGTTGAGTGGGCTATCTT GATTATTTCTGCAGTTATGATCCTGCAGAGTTCTTTGGACTATCTCTTTGCATTTTCAGC ATTATTATTTTGCACAGCCATCAAAGCAGTTTCTAGGATTGAGGGAAAGTCAAGAGTTCT ACGGTGCCTATCAAGGGCATTTTCGAACATTGTTCCCACTGGCTATGAAGGTTTTGGTGA GGAGTACTCCAGCATGAATGGATCTCACCAAGATGGATTTAGCAAGCTTCATGGTGAATA CATGAGGAGTACACCAAAAAGAAATTCACTTCGATCAAGGAAGACATTGTCTCAAGACCT TGCTACGGATAGCTACTATTCTACCTTCCACACTAACCCTGAGCGGAAAAAGTTTTCAGA GGAGGAATATGCAGCATTCACTAGAGAAGAGACACATAAAGCTATGAAACAACTGGTCTC ATCGCCTGATTTCAACAGGTGGGCACTAGCAAACGTGGACAGGATATCTGTGACTCCTCC ACAAAGAACACCCCAAAATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTTA AGCTGTGTGTGATATCTTCCATCTAGTAATCTGGTTTCAATTGCCAATCAATAGATTTGA GCTGTATATCAGTTTTTCTTCCTGGTAGTGGTATCTTCAGTGTGCTTGCAGCGGTAGGTA TTCAATGTATATGAATTGAGTGGTAGCTAGCAGCTGTAACAATGGTGTATTTGCTTGTGG AAGCGAATCTGTAGTAGCTGTAACGATGGCGTATTTACTTTTGTGGAAGCAAAAAAAAA



consensusID : consensus_10318#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 558
fasta sequence
                              [CGTTAGAANANGANCCCCGGCTNNGGATTNGAGGGCCAAAAGAATCATTTGANGGATCANGGNAANTTTTTTCCAGACCGGAANGGATTCNATNATNNACCTTCCACACTAACCGNGNGNGGAAAAGTTTNCAGGGGGGGNATNGGCGCATTCACTANGGAAGAGACANAGATAGTTNNNNAAACAACTGNTNTCNTCNCCNGATTTCNACAGGGGGCACCCNCAAACGTGGACAGGATATCTGNGACTCCTCCACAAAGAACACCCCAANATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTNAAGNTGTGTGNGATATCTTCCATCTAGTAATNTGGTTTCCATTGCCCATCAATAGATTTGNGNNGNANATCAGTTTTTCTTNCTGGTAGTGGTATNTTCAGNGTGCTTGCNGCGNTAGGNATTCAATGNATNTGNATNGNNTGNTNNCTANCAGCTGTAACAANGGNGTATTTGNTNGTGGAAGCGAATCTGTAGTAGCTGTAACGANGGCGTAAAAAAAAACCAANAAAANAAAAAAAAAAAAA]

[+] EMBL AA753685             [CGTTAGAANANGANCCCCGGCTNNGGATTNGAGGGCCAAAAGAATCATTTGANGGATCANGGNAANTTTTTTCCAGACCGGAANGGATTCNATNATNNACCTTCCACACTAACCGNGNGNGGAAAAGTTTNCAGGGGGGGNATNGGCGCATTCACTANGGAAGAGACANAGATAGTTNNNNAAACAACTGNTNTCNTCNCCNGATTTCNACAGGGGGCACCCNCAAACGTGGACAGGATATCTGNGACTCCTCCACAAAGAACACCCCAANATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTNAAGNTGTGTGNGATATCTTCCATCTAGTAATNTGGTTTCCATTGCCCATCAATAGATTTGNGNNGNANATCAGTTTTTCTTNCTGGTAGTGGTATNTTCAGNGTGCTTGCNGCGNTAGGNATTCAATGNATNTGNATNGNNTGNTNNCTANCAGCTGTAACAANGGNGTATTTGNTNGTGGAAGCGAATCTGTAGTAGCTGTAACGANGGCGTAAAAAAAAACCAANAAAANAAAAAAAAAAAAA]


>consensus_10318#1 CGTTAGAANANGANCCCCGGCTNNGGATTNGAGGGCCAAAAGAATCATTTGANGGATCAN GGNAANTTTTTTCCAGACCGGAANGGATTCNATNATNNACCTTCCACACTAACCGNGNGN GGAAAAGTTTNCAGGGGGGGNATNGGCGCATTCACTANGGAAGAGACANAGATAGTTNNN NAAACAACTGNTNTCNTCNCCNGATTTCNACAGGGGGCACCCNCAAACGTGGACAGGATA TCTGNGACTCCTCCACAAAGAACACCCCAANATAGCATGAGCCAGCAGCGGAAACGTTTG TTCGGACTGTTTNAAGNTGTGTGNGATATCTTCCATCTAGTAATNTGGTTTCCATTGCCC ATCAATAGATTTGNGNNGNANATCAGTTTTTCTTNCTGGTAGTGGTATNTTCAGNGTGCT TGCNGCGNTAGGNATTCAATGNATNTGNATNGNNTGNTNNCTANCAGCTGTAACAANGGN GTATTTGNTNGTGGAAGCGAATCTGTAGTAGCTGTAACGANGGCGTAAAAAAAAACCAAN AAAANAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10318#0      CAAAGCTAAACCACCCTTTCCCTCCTCCTCCTCCTCCTCCCTCCCTCCCCCGTCTTCTCC 60
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      TACCATCGCCCCGAAACAAATCCCCAATCCCTCAATCGCCGCCGCGATGCCACCACTCCA 120
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      CCGCCGCCTCGTTCTCTGCTTCCTCATCCTCGCCGCCGCCGCCGCCGCTACCACCGCTGC 180
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      CTCCATCTCCACCCCCGCCGAGCTCGCGGTCGCGTCGCACCCTCTGTCCCCCCTCCGTCT 240
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      CCCGCCGGCCGCGCCCTTCGCCGGCGGCGGGGAGGGCGGCGGCGGTGGCGGTGGCCCCTT 300
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      CTGCACACGCGTGCATATCCGCGGTCGCCCGTCCCGCCTCCGCGACCCGTCGCGCTTCTT 360
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      CCACGCCCTCAGGGTCCGCGCCAACGCTACCCGCCCCAGCGGACTTGAGCTCTGCTTTCA 420
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      CCGGAATGCCACAGTGGGTCCATGCAAGTGCGCGGCGTCACAGTGCCATAAGATGGCCAA 480
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GAGCGGCCTATGGGTGCAAGCCATCTCCCCGTACGACACCCGGGTCCTCGATTTCCGGAT 540
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GCCATCGGACCCTTCGAGGTCTATCATAGTGTCGACGGAGGAAGAGTTCTTGCTTCACAG 600
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GGTGGTGTTCTTGTTGCTGGGAATGGTGCTGATGGCAGTGGCGCACACTCTTAGCGAGTC 660
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      TGTGGTATTCTACTATGGCGGAGCAATGACGATTGGAATTTTCCTTGTAATTCTGATTAT 720
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      ACTCTTCCAGGGAATGAAGCTTTTACCCACTGGTAGAAAGAGTTCTCTTGCAATTTTTGT 780
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GTACTCTTCACTTGTTGGCATGACCACATATTTTTTGCACTATTTGTCGGGACTTTTACG 840
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      TTCTGTGCTTGTGGAAATTGGGATTGCCGAAGACATGCATAATCCTCTAGGTGTATTCCT 900
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      TCTCGTAAGTGTGATCTTAGCTGGAGCCTGGTTTGGTTACTGGGGTGTCCGTAAGCTTGT 960
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GCTAACAGAAGAAGGATCTGTTGATGCTGGTGTGGCTTATTTTGTTGAGTGGGCTATCTT 1020
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GATTATTTCTGCAGTTATGATCCTGCAGAGTTCTTTGGACTATCTCTTTGCATTTTCAGC 1080
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      ATTATTATTTTGCACAGCCATCAAAGCAGTTTCTAGGATTGAGGGAAAGTCAAGAGTTCT 1140
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      ACGGTGCCTATCAAGGGCATTTTCGAACATTGTTCCCACTGGCTATGAAGGTTTTGGTGA 1200
consensus_10318#1      ------------------------------------------------------------
                                                                                   

consensus_10318#0      GGAGTACTCCAGCATGAATGGATCTCACCAAGATGGATTTAGCAAGCTTCATGGTGAATA 1260
consensus_10318#1      ----------------------------------CGTTAGAANANGANCCCCGGCTNNGG 26
                                                          * *  *  * *   *  **      

consensus_10318#0      CATGAGGAGTACACCAAAAAGAAATTCACTTCGATCAAGGAAGACATTGTCTCAAGACCT 1320
consensus_10318#1      ATTNGAGGG----CCAAAAGAATCATTTGANGGATCANGGNAA--NTTTTTTCCAGACC- 79
                         *   * *    ******  *   *      ***** ** *    ** * ** ***** 

consensus_10318#0      TGCTACGGATAGCTACTATTCTACCTTCCACACTAACCCTGAGCGGAAAAAGTTTTCAGA 1380
consensus_10318#1      -GGAANGGAT--TCNATNATNNACCTTCCACACTAACCGNGNGNGGAAAA-GTTTNCAGG 135
                        *  * ****      *  *  ****************  * * ****** **** *** 

consensus_10318#0      GGAGGAATATGCAGCATTCACTAGAGAAGAGACACATAAAGCTATGAAA-CAACTGGTCT 1439
consensus_10318#1      GGGGGNATNGGC-GCATTCACTANGGAAGAGACANAGATAGTTNNNNAAACAACTGNTNT 194
                       ** ** **  ** **********  ********* * * ** *    ** ****** * *

consensus_10318#0      CATCGCCTGATTTCAACAGGTGGGCACTAGCAAACGTGGACAGGATATCTGTGACTCCTC 1499
consensus_10318#1      CNTCNCCNGATTTCNACAGG-GGGCACCCNCAAACGTGGACAGGATATCTGNGACTCCTC 253
                       * ** ** ****** ***** ******   ********************* ********

consensus_10318#0      CACAAAGAACACCCCAAAATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTT 1559
consensus_10318#1      CACAAAGAACACCCCAANATAGCATGAGCCAGCAGCGGAAACGTTTGTTCGGACTGTTTN 313
                       ***************** ***************************************** 

consensus_10318#0      AAGCTGTGTGTGATATCTTCCATCTAGTAATCTGGTTTCAATTGCCAATCAATAGATTTG 1619
consensus_10318#1      AAGNTGTGTGNGATATCTTCCATCTAGTAATNTGGTTTCCATTGCCCATCAATAGATTTG 373
                       *** ****** ******************** ******* ****** *************

consensus_10318#0      AGCTGTATATCAGTTTTTCTTCCTGGTAGTGGTATCTTCAGTGTGCTTGCAGCGGTAGGT 1679
consensus_10318#1      NGNNGNANATCAGTTTTTCTTNCTGGTAGTGGTATNTTCAGNGTGCTTGCNGCGNTAGGN 433
                        *  * * ************* ************* ***** ******** *** **** 

consensus_10318#0      ATTCAATGTATATGAATTGAGTGGTAGCTAGCAGCTGTAACAATGGTGTATTTGCTTGTG 1739
consensus_10318#1      ATTCAATGNATNTGNATNGNNTGNTNNCTANCAGCTGTAACAANGGNGTATTTGNTNGTG 493
                       ******** ** ** ** *  ** *  *** ************ ** ******* * ***

consensus_10318#0      GAAGCGAATCTGTAGTAGCTGTAACGATGGCGTATTTACTT-TTGTGGAAGCAAAAAAAA 1798
consensus_10318#1      GAAGCGAATCTGTAGTAGCTGTAACGANGGCGTAAAAAAAAACCAANAAAANAAAAAAAA 553
                       *************************** ******   *          **  ********

consensus_10318#0      A---- 1799
consensus_10318#1      AAAAA 558
                       *    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)